RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 C9orf172C9J069 976 aa9.23□□□□□ -0.93
LSM5-209ENST00000468872 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
LSM5-209ENST00000468872 WFDC8Q8IUA0 241 aa9.23□□□□□ -0.93
LSM5-209ENST00000468872 GPR152Q8TDT2 470 aa9.23□□□□□ -0.93
LSM5-209ENST00000468872 DTWD1Q8N5C7 304 aa9.22□□□□□ -0.93
LSM5-209ENST00000468872 PLD4Q96BZ4 506 aa9.22□□□□□ -0.93
LSM5-209ENST00000468872 LENG1Q96BZ8 264 aaPredicted RBP9.22□□□□□ -0.93
LSM5-209ENST00000468872 TPSG1Q9NRR2 321 aa9.22□□□□□ -0.93
LSM5-209ENST00000468872 FNDC3AQ9Y2H6 1198 aaKnown RBP9.22□□□□□ -0.93
LSM5-209ENST00000468872 GHRHP01286 108 aa9.21□□□□□ -0.94
LSM5-209ENST00000468872 SCNN1AP37088 669 aa9.21□□□□□ -0.94
LSM5-209ENST00000468872 ADGRE1Q14246 886 aa9.21□□□□□ -0.94
LSM5-209ENST00000468872 MBTPS1Q14703 1052 aa9.21□□□□□ -0.94
LSM5-209ENST00000468872 FBXO11Q86XK2 927 aa9.2□□□□□ -0.94
LSM5-209ENST00000468872 OR13H1Q8NG92 308 aa9.2□□□□□ -0.94
LSM5-209ENST00000468872 HELQQ8TDG4 1101 aa9.2□□□□□ -0.94
LSM5-209ENST00000468872 RBSNQ9H1K0 784 aa9.2□□□□□ -0.94
LSM5-209ENST00000468872 NRG1Q02297 640 aaPredicted RBP9.19□□□□□ -0.94
LSM5-209ENST00000468872 RSPO4Q2I0M5 234 aaPredicted RBP9.19□□□□□ -0.94
LSM5-209ENST00000468872 ATCAYQ86WG3 371 aa9.19□□□□□ -0.94
LSM5-209ENST00000468872 SEMA6BQ9H3T3 888 aa9.19□□□□□ -0.94
LSM5-209ENST00000468872 BRD1O95696 1058 aa9.18□□□□□ -0.94
LSM5-209ENST00000468872 ITGB7P26010 798 aa9.18□□□□□ -0.94
LSM5-209ENST00000468872 SSFA2P28290 1259 aa9.18□□□□□ -0.94
LSM5-209ENST00000468872 NKAPLQ5M9Q1 402 aa9.18□□□□□ -0.94
LSM5-209ENST00000468872 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
LSM5-209ENST00000468872 NUDT16Q96DE0 195 aaKnown RBP9.18□□□□□ -0.94
LSM5-209ENST00000468872 USP21Q9UK80 565 aa9.18□□□□□ -0.94
LSM5-209ENST00000468872 DEAF1O75398 565 aaPredicted RBP9.17□□□□□ -0.94
LSM5-209ENST00000468872 COL13A1Q5TAT6 717 aaPredicted RBP9.17□□□□□ -0.94
LSM5-209ENST00000468872 TTC39BQ5VTQ0 682 aaPredicted RBP9.17□□□□□ -0.94
LSM5-209ENST00000468872 TXNRD3Q86VQ6 643 aa9.17□□□□□ -0.94
LSM5-209ENST00000468872 HYAL2Q12891 473 aa9.16□□□□□ -0.94
LSM5-209ENST00000468872 GTF3C2Q8WUA4 911 aaPredicted RBP9.16□□□□□ -0.94
LSM5-209ENST00000468872 ABI2Q9NYB9 513 aaPredicted RBP9.16□□□□□ -0.94
LSM5-209ENST00000468872 TRIM33Q9UPN9 1127 aa9.16□□□□□ -0.94
LSM5-209ENST00000468872 PDE12Q6L8Q7 609 aaKnown RBP9.15□□□□□ -0.94
LSM5-209ENST00000468872 IL22RA1Q8N6P7 574 aa9.15□□□□□ -0.94
LSM5-209ENST00000468872 KCNA1Q09470 495 aa9.14□□□□□ -0.95
LSM5-209ENST00000468872 NOM1Q5C9Z4 860 aaKnown RBP9.14□□□□□ -0.95
LSM5-209ENST00000468872 IGF2-ASQ6U949 168 aa9.14□□□□□ -0.95
LSM5-209ENST00000468872 EDEM1Q92611 657 aa9.14□□□□□ -0.95
LSM5-209ENST00000468872 ELP3Q9H9T3 547 aa9.14□□□□□ -0.95
LSM5-209ENST00000468872 TMEM63CQ9P1W3 806 aa9.14□□□□□ -0.95
LSM5-209ENST00000468872 KIF4AO95239 1232 aa9.13□□□□□ -0.95
LSM5-209ENST00000468872 CYP2E1P05181 493 aaPredicted RBP9.13□□□□□ -0.95
LSM5-209ENST00000468872 MPSTP25325 297 aa9.13□□□□□ -0.95
LSM5-209ENST00000468872 ATP11AP98196 1134 aa9.13□□□□□ -0.95
LSM5-209ENST00000468872 DNM1Q05193 864 aaKnown RBP9.13□□□□□ -0.95
LSM5-209ENST00000468872 PHLDB3Q6NSJ2 640 aa9.13□□□□□ -0.95
LSM5-209ENST00000468872 ZNF438Q7Z4V0 828 aa9.13□□□□□ -0.95
LSM5-209ENST00000468872 SPACA7Q96KW9 195 aa9.13□□□□□ -0.95
LSM5-209ENST00000468872 DLL1O00548 723 aa9.12□□□□□ -0.95
LSM5-209ENST00000468872 DYRK3O43781 588 aa9.12□□□□□ -0.95
LSM5-209ENST00000468872 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
LSM5-209ENST00000468872 EIF1AXP47813 144 aaKnown RBP9.12□□□□□ -0.95
LSM5-209ENST00000468872 MTMR3Q13615 1198 aa9.12□□□□□ -0.95
LSM5-209ENST00000468872 PDGFAP04085 211 aa9.11□□□□□ -0.95
LSM5-209ENST00000468872 CACTIN-AS1Q8N1I8 211 aa9.11□□□□□ -0.95
LSM5-209ENST00000468872 WFDC12Q8WWY7 111 aa9.11□□□□□ -0.95
LSM5-209ENST00000468872 PATL2C9JE40 543 aaKnown RBP9.1□□□□□ -0.95
LSM5-209ENST00000468872 SMNDC1O75940 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
LSM5-209ENST00000468872 PCSK2P16519 638 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 MZF1P28698 734 aaPredicted RBP9.1□□□□□ -0.95
LSM5-209ENST00000468872 IREB2P48200 963 aaKnown RBP9.1□□□□□ -0.95
LSM5-209ENST00000468872 SETDB1Q15047 1291 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 CEP135Q66GS9 1140 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 XKR5Q6UX68 686 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 NCAPG2Q86XI2 1143 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 SSBP4Q9BWG4 385 aaPredicted RBP9.1□□□□□ -0.95
LSM5-209ENST00000468872 GZF1Q9H116 711 aaPredicted RBP9.1□□□□□ -0.95
LSM5-209ENST00000468872 MUC3BQ9H195 1237 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 RASSF4Q9H2L5 321 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 GGNBP2Q9H3C7 697 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 SRA1Q9HD15 236 aaKnown RBP9.1□□□□□ -0.95
LSM5-209ENST00000468872 CNTN3Q9P232 1028 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 PPME1Q9Y570 386 aa9.1□□□□□ -0.95
LSM5-209ENST00000468872 NOS3P29474 1203 aa9.09□□□□□ -0.95
LSM5-209ENST00000468872 MAP4K3Q8IVH8 894 aa9.09□□□□□ -0.95
LSM5-209ENST00000468872 CEP120Q8N960 986 aa9.09□□□□□ -0.95
LSM5-209ENST00000468872 TP53INP1Q96A56 240 aa9.09□□□□□ -0.95
LSM5-209ENST00000468872 LACRTQ9GZZ8 138 aa9.09□□□□□ -0.95
LSM5-209ENST00000468872 A6NHS1 94 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 H2AFB1P0C5Y9 115 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 H2AFB2P0C5Z0 115 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 NPR3P17342 541 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 C8orf34Q49A92 452 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 ADAMTSL4Q6UY14 1074 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 C1orf127Q8N9H9 656 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 PBX4Q9BYU1 374 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 KANSL3Q9P2N6 904 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
LSM5-209ENST00000468872 B4GALNT3Q6L9W6 998 aa9.07□□□□□ -0.96
LSM5-209ENST00000468872 TTC16Q8NEE8 873 aa9.07□□□□□ -0.96
LSM5-209ENST00000468872 DCAF11Q8TEB1 546 aa9.07□□□□□ -0.96
LSM5-209ENST00000468872 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
LSM5-209ENST00000468872 POLIQ9UNA4 740 aa9.07□□□□□ -0.96
LSM5-209ENST00000468872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms