RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ARXQ96QS3 562 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 SETDB2Q96T68 719 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 NYXQ9GZU5 481 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 TSR3Q9UJK0 312 aaKnown RBP4.5□□□□□ -1.69
TRIM59-202ENST00000468542 TSKSQ9UJT2 592 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 TBC1D2BQ9UPU7 963 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 SALL2Q9Y467 1007 aaPredicted RBP4.5□□□□□ -1.69
TRIM59-202ENST00000468542 A0A1B0GUL6 1792 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 PXDNLA1KZ92 1463 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 LTBP1Q14766 1721 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 KIF16BQ96L93 1317 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 KLRG2A4D1S0 409 aaPredicted RBP4.49□□□□□ -1.69
TRIM59-202ENST00000468542 C3orf80F5H4A9 247 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 ELL2O00472 640 aaPredicted RBP4.49□□□□□ -1.69
TRIM59-202ENST00000468542 MYL6BP14649 208 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 TGFB2P61812 414 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 DDR1Q08345 913 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 LAPTM4AQ15012 233 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 TPTE2Q6XPS3 522 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 CCDC191Q8NCU4 936 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 LINS1Q8NG48 757 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 BBXQ8WY36 941 aaPredicted RBP4.49□□□□□ -1.69
TRIM59-202ENST00000468542 BRIP1Q9BX63 1249 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 FAM198AQ9UFP1 575 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 SRP68Q9UHB9 627 aaKnown RBP4.49□□□□□ -1.69
TRIM59-202ENST00000468542 SEPT9Q9UHD8 586 aaPredicted RBP4.49□□□□□ -1.69
TRIM59-202ENST00000468542 ZNF330Q9Y3S2 320 aaPredicted RBP4.49□□□□□ -1.69
TRIM59-202ENST00000468542 PARP3Q9Y6F1 533 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 CCDC88AQ3V6T2 1871 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 PSME4Q14997 1843 aa4.49□□□□□ -1.69
TRIM59-202ENST00000468542 TNRC6CQ9HCJ0 1690 aaKnown RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 SNED1Q8TER0 1413 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 CACNA1SQ13698 1873 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PI4KAP2A4QPH2 592 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 IPO8O15397 1037 aaKnown RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 SERPINB2P05120 415 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PIP4K2AP48426 406 aaPredicted RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 RARSP54136 660 aaKnown RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 NEXNQ0ZGT2 675 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 HLFQ16534 295 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 TSR1Q2NL82 804 aaKnown RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 CRY2Q49AN0 593 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 TJAP1Q5JTD0 557 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 SLC10A5Q5PT55 438 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 TBC1D9BQ66K14 1250 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PRR5LQ6MZQ0 368 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 TTLL7Q6ZT98 887 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PPP1R42Q7Z4L9 355 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PACS2Q86VP3 889 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 NBPF5PQ86XG9 351 aaPredicted RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PI4KAP1Q8N8J0 262 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 CNBD1Q8NA66 436 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 SSH1Q8WYL5 1049 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 ISCA1Q9BUE6 129 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 METTL22Q9BUU2 404 aaPredicted RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 ZBTB3Q9H5J0 574 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PHAXQ9H814 394 aaKnown RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 RBM27Q9P2N5 1060 aaKnown RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 PPP1R1BQ9UD71 204 aaPredicted RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 NIP7Q9Y221 180 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 ADCY9O60503 1353 aa4.48□□□□□ -1.69
TRIM59-202ENST00000468542 ZNF646O15015 1829 aaPredicted RBP4.48□□□□□ -1.69
TRIM59-202ENST00000468542 UBN2Q6ZU65 1347 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 SH3TC1Q8TE82 1336 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 ALDH1L1O75891 902 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 NTSR2O95665 410 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 ANXA1P04083 346 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 PCCAP05165 728 aaPredicted RBP4.47□□□□□ -1.69
TRIM59-202ENST00000468542 PDE6BP35913 854 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 ST5P78524 1137 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 FKBP5Q13451 457 aaPredicted RBP4.47□□□□□ -1.69
TRIM59-202ENST00000468542 GRIPAP1Q4V328 841 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 MSL1Q68DK7 614 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 SMIM5Q71RC9 77 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 RIC3Q7Z5B4 369 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 NLRP10Q86W26 655 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 ZBTB38Q8NAP3 1195 aaPredicted RBP4.47□□□□□ -1.69
TRIM59-202ENST00000468542 DNAAF4Q8WXU2 420 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 NECTIN2Q92692 538 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 DDX12PQ92771 950 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 LRCH3Q96II8 777 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 SYT17Q9BSW7 474 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 UTP14AQ9BVJ6 771 aaKnown RBP4.47□□□□□ -1.69
TRIM59-202ENST00000468542 API5Q9BZZ5 524 aaKnown RBP4.47□□□□□ -1.69
TRIM59-202ENST00000468542 FHDC1Q9C0D6 1143 aaPredicted RBP4.47□□□□□ -1.69
TRIM59-202ENST00000468542 SMC4Q9NTJ3 1288 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 HDAC5Q9UQL6 1122 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 MAP3K2Q9Y2U5 619 aa4.47□□□□□ -1.69
TRIM59-202ENST00000468542 UTYO14607 1347 aa4.46□□□□□ -1.69
TRIM59-202ENST00000468542 CDHR2Q9BYE9 1310 aa4.46□□□□□ -1.69
TRIM59-202ENST00000468542 SLX4Q8IY92 1834 aa4.46□□□□□ -1.69
TRIM59-202ENST00000468542 SENP3-EIF4A1A0A087X0R7 540 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 NEURL1BA8MQ27 555 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 SRGNP10124 158 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 MS4A1P11836 297 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 HOXA10P31260 410 aaPredicted RBP4.46□□□□□ -1.7
TRIM59-202ENST00000468542 CCT4P50991 539 aaKnown RBP4.46□□□□□ -1.7
TRIM59-202ENST00000468542 AIMP1Q12904 312 aaKnown RBP4.46□□□□□ -1.7
TRIM59-202ENST00000468542 SF3B3Q15393 1217 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms