RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 TBC1D2Q9BYX2 928 aa9.04□□□□□ -0.96
MSL3-210ENST00000468149 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
MSL3-210ENST00000468149 POLRMTO00411 1230 aaKnown RBP9.03□□□□□ -0.96
MSL3-210ENST00000468149 MYL6BP14649 208 aa9.03□□□□□ -0.96
MSL3-210ENST00000468149 MICAL1Q8TDZ2 1067 aa9.03□□□□□ -0.96
MSL3-210ENST00000468149 DDX21Q9NR30 783 aaKnown RBP eCLIP9.03□□□□□ -0.96
MSL3-210ENST00000468149 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
MSL3-210ENST00000468149 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
MSL3-210ENST00000468149 CARMIL3Q8ND23 1372 aa9.03□□□□□ -0.96
MSL3-210ENST00000468149 TGFB2P61812 414 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 DDR1Q08345 913 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 IFFO2Q5TF58 517 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 KIF6Q6ZMV9 814 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 DPH6Q7L8W6 267 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 C8orf58Q8NAV2 365 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 TSR2Q969E8 191 aaKnown RBP9.02□□□□□ -0.96
MSL3-210ENST00000468149 MYH16Q9H6N6 1097 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.96
MSL3-210ENST00000468149 PPME1Q9Y570 386 aa9.02□□□□□ -0.96
MSL3-210ENST00000468149 MAP3K15Q6ZN16 1313 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 FANCIQ9NVI1 1328 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 ATP10DQ9P241 1426 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 COL11A2P13942 1736 aaPredicted RBP9.02□□□□□ -0.97
MSL3-210ENST00000468149 CCDC88AQ3V6T2 1871 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 MYH3P11055 1940 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 CLCN6P51797 869 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 GOLGA2Q08379 1002 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 TBC1D9BQ66K14 1250 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 SETDB2Q96T68 719 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 HYPKQ9NX55 129 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
MSL3-210ENST00000468149 LAMB2P55268 1798 aa9.01□□□□□ -0.97
MSL3-210ENST00000468149 ELL2O00472 640 aaPredicted RBP9.01□□□□□ -0.97
MSL3-210ENST00000468149 SERPINB2P05120 415 aa9.01□□□□□ -0.97
MSL3-210ENST00000468149 WASHC4Q2M389 1173 aa9.01□□□□□ -0.97
MSL3-210ENST00000468149 PROSER3Q2NL68 480 aa9.01□□□□□ -0.97
MSL3-210ENST00000468149 TWISTNBQ3B726 338 aaPredicted RBP9.01□□□□□ -0.97
MSL3-210ENST00000468149 CCDC30Q5VVM6 783 aa9.01□□□□□ -0.97
MSL3-210ENST00000468149 MS4A3Q96HJ5 214 aa9.01□□□□□ -0.97
MSL3-210ENST00000468149 PXDNLA1KZ92 1463 aa9.01□□□□□ -0.97
MSL3-210ENST00000468149 SBF1O95248 1867 aa9□□□□□ -0.97
MSL3-210ENST00000468149 HLFQ16534 295 aa9□□□□□ -0.97
MSL3-210ENST00000468149 BICDL1Q6ZP65 573 aa9□□□□□ -0.97
MSL3-210ENST00000468149 TTLL7Q6ZT98 887 aa9□□□□□ -0.97
MSL3-210ENST00000468149 COPS6Q7L5N1 327 aa9□□□□□ -0.97
MSL3-210ENST00000468149 TSPYL6Q8N831 410 aa9□□□□□ -0.97
MSL3-210ENST00000468149 NLGN2Q8NFZ4 835 aa9□□□□□ -0.97
MSL3-210ENST00000468149 DDX60Q8IY21 1712 aaKnown RBP8.99□□□□□ -0.97
MSL3-210ENST00000468149 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
MSL3-210ENST00000468149 ANXA1P04083 346 aa8.99□□□□□ -0.97
MSL3-210ENST00000468149 MARSP56192 900 aaKnown RBP8.99□□□□□ -0.97
MSL3-210ENST00000468149 PHOX2BQ99453 314 aa8.99□□□□□ -0.97
MSL3-210ENST00000468149 NIP7Q9Y221 180 aaKnown RBP eCLIP8.99□□□□□ -0.97
MSL3-210ENST00000468149 RAB11FIP3O75154 756 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 VAMP4O75379 141 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 NEFLP07196 543 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 HSP90AB3PQ58FF7 597 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 PRR5LQ6MZQ0 368 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 TPTE2Q6XPS3 522 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 ANKRD13DQ6ZTN6 518 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 NOP9Q86U38 636 aaKnown RBP8.98□□□□□ -0.97
MSL3-210ENST00000468149 NPAS4Q8IUM7 802 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 ZNF34Q8IZ26 560 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 CNBD1Q8NA66 436 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 PLBD2Q8NHP8 589 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 XAGE3Q8WTP9 111 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 ZBTB3Q9H5J0 574 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 TFIP11Q9UBB9 837 aaKnown RBP8.98□□□□□ -0.97
MSL3-210ENST00000468149 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 TNRC6CQ9HCJ0 1690 aaKnown RBP8.98□□□□□ -0.97
MSL3-210ENST00000468149 FER1L6Q2WGJ9 1857 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 RECKO95980 971 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 IRX6P78412 446 aaPredicted RBP8.98□□□□□ -0.97
MSL3-210ENST00000468149 EXOSC9Q06265 439 aaKnown RBP8.98□□□□□ -0.97
MSL3-210ENST00000468149 SLFN5Q08AF3 891 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 AIMP1Q12904 312 aaKnown RBP8.98□□□□□ -0.97
MSL3-210ENST00000468149 DSG2Q14126 1118 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 NBPF5PQ86XG9 351 aaPredicted RBP8.98□□□□□ -0.97
MSL3-210ENST00000468149 EXOC8Q8IYI6 725 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 BRIP1Q9BX63 1249 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 STK31Q9BXU1 1019 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 NYXQ9GZU5 481 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 LIMD1Q9UGP4 676 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 SUGT1Q9Y2Z0 365 aa8.98□□□□□ -0.97
MSL3-210ENST00000468149 DICER1Q9UPY3 1922 aaKnown RBP8.97□□□□□ -0.97
MSL3-210ENST00000468149 SLX4Q8IY92 1834 aa8.97□□□□□ -0.97
MSL3-210ENST00000468149 RIC1Q4ADV7 1423 aa8.97□□□□□ -0.97
MSL3-210ENST00000468149 RNF123Q5XPI4 1314 aa8.97□□□□□ -0.97
MSL3-210ENST00000468149 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
MSL3-210ENST00000468149 PDE6BP35913 854 aa8.97□□□□□ -0.97
MSL3-210ENST00000468149 ST5P78524 1137 aa8.97□□□□□ -0.97
MSL3-210ENST00000468149 DIXDC1Q155Q3 683 aa8.97□□□□□ -0.97
MSL3-210ENST00000468149 PARP10Q53GL7 1025 aa8.97□□□□□ -0.97
MSL3-210ENST00000468149 TRMT2AQ8IZ69 625 aaKnown RBP8.97□□□□□ -0.97
MSL3-210ENST00000468149 UBN2Q6ZU65 1347 aa8.96□□□□□ -0.97
MSL3-210ENST00000468149 A0A0G2JLW4 131 aa8.96□□□□□ -0.98
MSL3-210ENST00000468149 ANKRD33BA6NCL7 494 aa8.96□□□□□ -0.98
MSL3-210ENST00000468149 SOWAHDA6NJG2 315 aa8.96□□□□□ -0.98
MSL3-210ENST00000468149 NPHP1O15259 732 aa8.96□□□□□ -0.98
MSL3-210ENST00000468149 TPD52L2O43399 206 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms