RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ZBTB22O15209 634 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 IGSF3O75054 1194 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 MAP4K4O95819 1239 aaPredicted RBP12.26□□□□□ -0.45
MSH5-213ENST00000468136 PTMSP20962 102 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 PSMA5P28066 241 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 SSFA2P28290 1259 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 KRT32Q14532 448 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 MAP4K1Q92918 833 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 ZNF594Q96JF6 807 aaPredicted RBP12.26□□□□□ -0.45
MSH5-213ENST00000468136 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 MED23Q9ULK4 1368 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 SCN7AQ01118 1682 aa12.26□□□□□ -0.45
MSH5-213ENST00000468136 GNPATO15228 680 aa12.25□□□□□ -0.45
MSH5-213ENST00000468136 PDIA4P13667 645 aaKnown RBP12.25□□□□□ -0.45
MSH5-213ENST00000468136 SLC5A1P13866 664 aa12.25□□□□□ -0.45
MSH5-213ENST00000468136 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
MSH5-213ENST00000468136 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
MSH5-213ENST00000468136 VGLL2Q8N8G2 317 aa12.25□□□□□ -0.45
MSH5-213ENST00000468136 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
MSH5-213ENST00000468136 INTS4Q96HW7 963 aaKnown RBP12.25□□□□□ -0.45
MSH5-213ENST00000468136 PUS3Q9BZE2 481 aaKnown RBP12.25□□□□□ -0.45
MSH5-213ENST00000468136 RFC4P35249 363 aa12.24□□□□□ -0.45
MSH5-213ENST00000468136 TIMM10P62072 90 aa12.24□□□□□ -0.45
MSH5-213ENST00000468136 NUCB2P80303 420 aa12.24□□□□□ -0.45
MSH5-213ENST00000468136 NMIQ13287 307 aaPredicted RBP12.24□□□□□ -0.45
MSH5-213ENST00000468136 RIC1Q4ADV7 1423 aa12.24□□□□□ -0.45
MSH5-213ENST00000468136 TMED8Q6PL24 325 aaPredicted RBP12.24□□□□□ -0.45
MSH5-213ENST00000468136 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
MSH5-213ENST00000468136 NLRP3Q96P20 1036 aa12.24□□□□□ -0.45
MSH5-213ENST00000468136 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.24□□□□□ -0.451e-14■■■□□ 17.4
MSH5-213ENST00000468136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.24□□□□□ -0.45
MSH5-213ENST00000468136 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
MSH5-213ENST00000468136 FGFR2P21802 821 aa12.23□□□□□ -0.45
MSH5-213ENST00000468136 KCNJ4P48050 445 aa12.23□□□□□ -0.45
MSH5-213ENST00000468136 NEK4P51957 841 aa12.23□□□□□ -0.45
MSH5-213ENST00000468136 NECTIN1Q15223 517 aa12.23□□□□□ -0.45
MSH5-213ENST00000468136 USPL1Q5W0Q7 1092 aa12.23□□□□□ -0.45
MSH5-213ENST00000468136 ANKRD18AQ8IVF6 992 aa12.23□□□□□ -0.45
MSH5-213ENST00000468136 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
MSH5-213ENST00000468136 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
MSH5-213ENST00000468136 PLSCR1O15162 318 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 RNF113AO15541 343 aaKnown RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 DDIT3P35638 169 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 ANKRD1Q15327 319 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 ZMYM1Q5SVZ6 1142 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 VPS53Q5VIR6 699 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 NBPF5PQ86XG9 351 aaPredicted RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 FLAD1Q8NFF5 587 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 ALDH8A1Q9H2A2 487 aaPredicted RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 SLKQ9H2G2 1235 aaPredicted RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 BSDC1Q9NW68 430 aaPredicted RBP12.22□□□□□ -0.45
MSH5-213ENST00000468136 SNX14Q9Y5W7 946 aa12.22□□□□□ -0.45
MSH5-213ENST00000468136 CARMIL3Q8ND23 1372 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 GOLIM4O00461 696 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 TAF5LO75529 589 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 HMGB1P09429 215 aaKnown RBP12.21□□□□□ -0.45
MSH5-213ENST00000468136 MAPK8IP2Q13387 824 aaPredicted RBP12.21□□□□□ -0.45
MSH5-213ENST00000468136 CUL4AQ13619 759 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 UBE4AQ14139 1066 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 NFKBIBQ15653 356 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 SYNE4Q8N205 404 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 ANKRD2Q9GZV1 360 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 BCL2L12Q9HB09 334 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.45
MSH5-213ENST00000468136 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
MSH5-213ENST00000468136 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 RBM8AQ9Y5S9 174 aaKnown RBP12.21□□□□□ -0.45
MSH5-213ENST00000468136 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
MSH5-213ENST00000468136 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 A0A0D9SFI3 127 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 TBC1D9BQ66K14 1250 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 CREB3L3Q68CJ9 461 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
MSH5-213ENST00000468136 APPBP2Q92624 585 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 FAM227BQ96M60 508 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
MSH5-213ENST00000468136 SEMA3EO15041 775 aa12.19□□□□□ -0.46
MSH5-213ENST00000468136 UBE3CQ15386 1083 aa12.19□□□□□ -0.46
MSH5-213ENST00000468136 ERFEQ4G0M1 354 aa12.19□□□□□ -0.46
MSH5-213ENST00000468136 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
MSH5-213ENST00000468136 IL25Q9H293 177 aa12.19□□□□□ -0.46
MSH5-213ENST00000468136 PALD1Q9ULE6 856 aa12.19□□□□□ -0.46
MSH5-213ENST00000468136 LIMCH1Q9UPQ0 1083 aa12.19□□□□□ -0.46
MSH5-213ENST00000468136 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
MSH5-213ENST00000468136 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 SLC27A2O14975 620 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 FKBP4Q02790 459 aaKnown RBP eCLIP12.18□□□□□ -0.46
MSH5-213ENST00000468136 PTH1RQ03431 593 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms