RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NDUFB9Q9Y6M9 179 aa25.03■■□□□ 1.6
TMEM53-207ENST00000468117 ADORA1P30542 326 aa25.03■■□□□ 1.6
TMEM53-207ENST00000468117 IGHMBP2P38935 993 aaKnown RBP25.03■■□□□ 1.6
TMEM53-207ENST00000468117 NLRP3Q96P20 1036 aa25.03■■□□□ 1.6
TMEM53-207ENST00000468117 TNRC6CQ9HCJ0 1690 aaKnown RBP25.02■■□□□ 1.6
TMEM53-207ENST00000468117 MROH5Q6ZUA9 1318 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 MSH5O43196 834 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 REC8O95072 547 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 PDE8BO95263 885 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 ATP2B3Q16720 1220 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 HELBQ8NG08 1087 aaPredicted RBP25.02■■□□□ 1.6
TMEM53-207ENST00000468117 EDC3Q96F86 508 aaKnown RBP25.02■■□□□ 1.6
TMEM53-207ENST00000468117 XAGE2Q96GT9 111 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 USP26Q9BXU7 913 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 IL25Q9H293 177 aa25.02■■□□□ 1.6
TMEM53-207ENST00000468117 CNBD1Q8NA66 436 aa25.01■■□□□ 1.59
TMEM53-207ENST00000468117 CDC5LQ99459 802 aaKnown RBP25.01■■□□□ 1.59
TMEM53-207ENST00000468117 DNAJC2Q99543 621 aaKnown RBP25.01■■□□□ 1.59
TMEM53-207ENST00000468117 HAUS7Q99871 368 aa25■■□□□ 1.59
TMEM53-207ENST00000468117 GORABQ5T7V8 394 aa25■■□□□ 1.59
TMEM53-207ENST00000468117 TM4SF1P30408 202 aa24.99■■□□□ 1.59
TMEM53-207ENST00000468117 CWC27Q6UX04 472 aaKnown RBP24.99■■□□□ 1.59
TMEM53-207ENST00000468117 COL23A1Q86Y22 540 aaPredicted RBP24.99■■□□□ 1.59
TMEM53-207ENST00000468117 EN1Q05925 392 aaPredicted RBP24.98■■□□□ 1.59
TMEM53-207ENST00000468117 FSD1Q9BTV5 496 aa24.98■■□□□ 1.59
TMEM53-207ENST00000468117 DIAPH3Q9NSV4 1193 aa24.98■■□□□ 1.59
TMEM53-207ENST00000468117 A0A1B0GUL6 1792 aa24.98■■□□□ 1.59
TMEM53-207ENST00000468117 TAF5LO75529 589 aa24.98■■□□□ 1.59
TMEM53-207ENST00000468117 EZH2Q15910 746 aaKnown RBP24.98■■□□□ 1.59
TMEM53-207ENST00000468117 CCDC158Q5M9N0 1113 aa24.98■■□□□ 1.59
TMEM53-207ENST00000468117 ANKRD18AQ8IVF6 992 aa24.98■■□□□ 1.59
TMEM53-207ENST00000468117 ARAP2Q8WZ64 1704 aa24.97■■□□□ 1.59
TMEM53-207ENST00000468117 PRR5LQ6MZQ0 368 aa24.97■■□□□ 1.59
TMEM53-207ENST00000468117 SERPINB2P05120 415 aa24.96■■□□□ 1.59
TMEM53-207ENST00000468117 IFIT1P09914 478 aaKnown RBP24.96■■□□□ 1.59
TMEM53-207ENST00000468117 PUM3Q15397 648 aaKnown RBP24.96■■□□□ 1.59
TMEM53-207ENST00000468117 CELF1Q92879 486 aaKnown RBP24.96■■□□□ 1.59
TMEM53-207ENST00000468117 ANO2Q9NQ90 1003 aa24.96■■□□□ 1.59
TMEM53-207ENST00000468117 SGSM2O43147 1006 aa24.96■■□□□ 1.59
TMEM53-207ENST00000468117 TTC39AQ5SRH9 613 aa24.96■■□□□ 1.59
TMEM53-207ENST00000468117 CAMKK2Q96RR4 588 aa24.96■■□□□ 1.59
TMEM53-207ENST00000468117 SNAP23O00161 211 aa24.95■■□□□ 1.58
TMEM53-207ENST00000468117 CHRNDQ07001 517 aa24.95■■□□□ 1.58
TMEM53-207ENST00000468117 DDR1Q08345 913 aa24.95■■□□□ 1.58
TMEM53-207ENST00000468117 DDX46Q7L014 1031 aaKnown RBP24.95■■□□□ 1.58
TMEM53-207ENST00000468117 KIF2CQ99661 725 aa24.95■■□□□ 1.58
TMEM53-207ENST00000468117 FGFR2P21802 821 aa24.95■■□□□ 1.58
TMEM53-207ENST00000468117 AKAP11Q9UKA4 1901 aa24.94■■□□□ 1.58
TMEM53-207ENST00000468117 SLC4A3P48751 1232 aa24.94■■□□□ 1.58
TMEM53-207ENST00000468117 LPIN2Q92539 896 aa24.94■■□□□ 1.58
TMEM53-207ENST00000468117 BSDC1Q9NW68 430 aaPredicted RBP24.94■■□□□ 1.58
TMEM53-207ENST00000468117 PAG1Q9NWQ8 432 aa24.94■■□□□ 1.58
TMEM53-207ENST00000468117 PNPLA7Q6ZV29 1317 aa24.94■■□□□ 1.58
TMEM53-207ENST00000468117 POLRMTO00411 1230 aaKnown RBP24.93■■□□□ 1.58
TMEM53-207ENST00000468117 GOLIM4O00461 696 aa24.93■■□□□ 1.58
TMEM53-207ENST00000468117 FLAD1Q8NFF5 587 aa24.93■■□□□ 1.58
TMEM53-207ENST00000468117 HIP1O00291 1037 aa24.93■■□□□ 1.58
TMEM53-207ENST00000468117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.93■■□□□ 1.58
TMEM53-207ENST00000468117 RUFY2Q8WXA3 655 aa24.93■■□□□ 1.58
TMEM53-207ENST00000468117 FAM227BQ96M60 508 aa24.93■■□□□ 1.58
TMEM53-207ENST00000468117 RPS8P62241 208 aaKnown RBP24.92■■□□□ 1.58
TMEM53-207ENST00000468117 NMIQ13287 307 aaPredicted RBP24.92■■□□□ 1.58
TMEM53-207ENST00000468117 SCARF1Q14162 830 aa24.92■■□□□ 1.58
TMEM53-207ENST00000468117 ST5P78524 1137 aa24.91■■□□□ 1.58
TMEM53-207ENST00000468117 ANO8Q9HCE9 1232 aaPredicted RBP24.91■■□□□ 1.58
TMEM53-207ENST00000468117 SNRKQ9NRH2 765 aa24.91■■□□□ 1.58
TMEM53-207ENST00000468117 SLC5A1P13866 664 aa24.91■■□□□ 1.58
TMEM53-207ENST00000468117 FKBP4Q02790 459 aaKnown RBP eCLIP24.91■■□□□ 1.58
TMEM53-207ENST00000468117 NLGN1Q8N2Q7 840 aa24.91■■□□□ 1.58
TMEM53-207ENST00000468117 KBTBD3Q8NAB2 608 aa24.9■■□□□ 1.58
TMEM53-207ENST00000468117 A0A0D9SFI3 127 aa24.9■■□□□ 1.58
TMEM53-207ENST00000468117 CCDC102BQ68D86 513 aa24.9■■□□□ 1.58
TMEM53-207ENST00000468117 ANTXR1Q9H6X2 564 aa24.9■■□□□ 1.58
TMEM53-207ENST00000468117 MINPP1Q9UNW1 487 aa24.9■■□□□ 1.58
TMEM53-207ENST00000468117 CHGBP05060 677 aa24.89■■□□□ 1.57
TMEM53-207ENST00000468117 PHKA1P46020 1223 aa24.89■■□□□ 1.57
TMEM53-207ENST00000468117 PI16Q6UXB8 463 aa24.89■■□□□ 1.57
TMEM53-207ENST00000468117 DAXXQ9UER7 740 aaPredicted RBP24.89■■□□□ 1.57
TMEM53-207ENST00000468117 MCAMP43121 646 aa24.88■■□□□ 1.57
TMEM53-207ENST00000468117 SF3B2Q13435 895 aaKnown RBP24.88■■□□□ 1.57
TMEM53-207ENST00000468117 SLC15A2Q16348 729 aa24.88■■□□□ 1.57
TMEM53-207ENST00000468117 LSG1Q9H089 658 aaKnown RBP24.88■■□□□ 1.57
TMEM53-207ENST00000468117 MYO5AQ9Y4I1 1855 aaKnown RBP24.88■■□□□ 1.57
TMEM53-207ENST00000468117 RFX7Q2KHR2 1363 aa24.87■■□□□ 1.57
TMEM53-207ENST00000468117 KIAA1211Q6ZU35 1233 aa24.87■■□□□ 1.57
TMEM53-207ENST00000468117 DEFB132Q7Z7B7 95 aa24.87■■□□□ 1.57
TMEM53-207ENST00000468117 MYH7P12883 1935 aa24.87■■□□□ 1.57
TMEM53-207ENST00000468117 WTIPA6NIX2 430 aaPredicted RBP24.86■■□□□ 1.57
TMEM53-207ENST00000468117 ZAP70P43403 619 aa24.86■■□□□ 1.57
TMEM53-207ENST00000468117 BECN1Q14457 450 aa24.86■■□□□ 1.57
TMEM53-207ENST00000468117 ZNF512BQ96KM6 892 aaPredicted RBP24.86■■□□□ 1.57
TMEM53-207ENST00000468117 ANKRD31Q8N7Z5 1873 aa24.86■■□□□ 1.57
TMEM53-207ENST00000468117 NRXN2Q9P2S2 1712 aa24.86■■□□□ 1.57
TMEM53-207ENST00000468117 RAD50Q92878 1312 aa24.86■■□□□ 1.57
TMEM53-207ENST00000468117 BAG6P46379 1132 aa24.86■■□□□ 1.57
TMEM53-207ENST00000468117 TBC1D2Q9BYX2 928 aa24.86■■□□□ 1.57
TMEM53-207ENST00000468117 ARID4AP29374 1257 aaPredicted RBP24.85■■□□□ 1.57
TMEM53-207ENST00000468117 MSL1Q68DK7 614 aa24.85■■□□□ 1.57
TMEM53-207ENST00000468117 RPGRQ92834 1020 aaKnown RBP24.85■■□□□ 1.57
TMEM53-207ENST00000468117 CRY2Q49AN0 593 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms