RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 MED23Q9ULK4 1368 aa17.51■□□□□ 0.39
PRPF38B-204ENST00000467302 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 VPS37CA5D8V6 355 aaPredicted RBP17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 CCDC191Q8NCU4 936 aa17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 FAM13BQ9NYF5 915 aa17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 JCADQ9P266 1359 aa17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 SPATA31A5Q5VU36 1347 aa17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 SPATA31A7Q8IWB4 1347 aa17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 PTPN12Q05209 780 aaKnown RBP17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
PRPF38B-204ENST00000467302 ELP1O95163 1332 aa17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 KCNJ4P48050 445 aa17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 DDB1Q16531 1140 aa17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 TSGA10IPQ3SY00 556 aa17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 KIF6Q6ZMV9 814 aa17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 MPNDQ8N594 471 aa17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 TTC12Q9H892 705 aaPredicted RBP17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 SPTLC3Q9NUV7 552 aa17.49■□□□□ 0.39
PRPF38B-204ENST00000467302 NUTM2BA6NNL0 878 aaPredicted RBP17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 NUTM2EB1AL46 878 aaPredicted RBP17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 AP5Z1O43299 807 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 TTC6Q86TZ1 520 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 NUTM2AQ8IVF1 878 aaPredicted RBP17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 PDCP20941 246 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 RPS6KB1P23443 525 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 KRT85P78386 507 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 FOXO4P98177 505 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 RNF20Q5VTR2 975 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 TAF6LQ9Y6J9 622 aa17.48■□□□□ 0.39
PRPF38B-204ENST00000467302 TOB2Q14106 344 aaPredicted RBP17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 BLOC1S2Q6QNY1 142 aa17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 BARGINQ6ZT62 677 aa17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 ZNF330Q9Y3S2 320 aaPredicted RBP17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 CCDC192P0DO97 292 aa17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 MYRIPQ8NFW9 859 aa17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 SYTL4Q96C24 671 aaPredicted RBP17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
PRPF38B-204ENST00000467302 CICQ96RK0 1608 aaPredicted RBP17.46■□□□□ 0.39
PRPF38B-204ENST00000467302 KAT6BQ8WYB5 2073 aa17.46■□□□□ 0.39
PRPF38B-204ENST00000467302 TCIRG1Q13488 830 aa17.46■□□□□ 0.39
PRPF38B-204ENST00000467302 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
PRPF38B-204ENST00000467302 HMG20BQ9P0W2 317 aa17.46■□□□□ 0.39
PRPF38B-204ENST00000467302 CHMP3Q9Y3E7 222 aa17.46■□□□□ 0.39
PRPF38B-204ENST00000467302 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 MTERF4Q7Z6M4 381 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 PRIMPOLQ96LW4 560 aa17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 UBAP1LF5GYI3 381 aa17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 TAF5LO75529 589 aa17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 TFCP2Q12800 502 aa17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
PRPF38B-204ENST00000467302 MAP3K15Q6ZN16 1313 aa17.44■□□□□ 0.38
PRPF38B-204ENST00000467302 LIG1P18858 919 aa17.44■□□□□ 0.38
PRPF38B-204ENST00000467302 FERMT3Q86UX7 667 aa17.44■□□□□ 0.38
PRPF38B-204ENST00000467302 TCEANC2Q96MN5 208 aa17.44■□□□□ 0.38
PRPF38B-204ENST00000467302 SLC4A9Q96Q91 983 aa17.44■□□□□ 0.38
PRPF38B-204ENST00000467302 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 FAM173BQ6P4H8 233 aa17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 C17orf53Q8N3J3 647 aaPredicted RBP17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 GTF2F1P35269 517 aaKnown RBP eCLIP17.43■□□□□ 0.383e-13■■■■■ 48.5
PRPF38B-204ENST00000467302 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 FAM200AQ8TCP9 573 aa17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 SCAND2PQ9GZW5 306 aaPredicted RBP17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 NUP62CLQ9H1M0 184 aa17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 KCNF1Q9H3M0 494 aa17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 CCDC9Q9Y3X0 531 aaKnown RBP17.43■□□□□ 0.38
PRPF38B-204ENST00000467302 ATP5JP18859 108 aa17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 HSP90AB3PQ58FF7 597 aa17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 DNTTIP2Q5QJE6 756 aaKnown RBP17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 KIAA1524Q8TCG1 905 aa17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 MRVI1Q9Y6F6 885 aa17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 RREB1Q92766 1687 aa17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 TPM3P06753 285 aa17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 RBM43Q6ZSC3 357 aaKnown RBP17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
PRPF38B-204ENST00000467302 PLCB2Q00722 1185 aa17.41■□□□□ 0.38
PRPF38B-204ENST00000467302 TYRO3Q06418 890 aa17.41■□□□□ 0.38
PRPF38B-204ENST00000467302 GIGYF2Q6Y7W6 1299 aaKnown RBP17.41■□□□□ 0.38
PRPF38B-204ENST00000467302 ZMYND15Q9H091 742 aa17.41■□□□□ 0.38
PRPF38B-204ENST00000467302 DBNLQ9UJU6 430 aaKnown RBP17.41■□□□□ 0.38
PRPF38B-204ENST00000467302 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 PCCAP05165 728 aaPredicted RBP17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 KRT32Q14532 448 aa17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 LEO1Q8WVC0 666 aaPredicted RBP17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 GTF3C6Q969F1 213 aa17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 SPATA32Q96LK8 384 aa17.4■□□□□ 0.38
PRPF38B-204ENST00000467302 DACT1Q9NYF0 836 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms