RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 STARD3NLO95772 234 aa9.42□□□□□ -0.9
SND1-205ENST00000467238 MLLT3P42568 568 aaPredicted RBP9.42□□□□□ -0.9
SND1-205ENST00000467238 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
SND1-205ENST00000467238 EIF5P55010 431 aaKnown RBP9.42□□□□□ -0.9
SND1-205ENST00000467238 NFIXQ14938 502 aa9.42□□□□□ -0.9
SND1-205ENST00000467238 ZNF526Q8TF50 670 aaPredicted RBP9.42□□□□□ -0.9
SND1-205ENST00000467238 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
SND1-205ENST00000467238 NUDCQ9Y266 331 aa9.42□□□□□ -0.9
SND1-205ENST00000467238 LAMB4A4D0S4 1761 aa9.42□□□□□ -0.9
SND1-205ENST00000467238 NUP98P52948 1817 aa9.41□□□□□ -0.9
SND1-205ENST00000467238 SNRPBP14678 240 aaKnown RBP9.41□□□□□ -0.9
SND1-205ENST00000467238 CANXP27824 592 aaKnown RBP9.41□□□□□ -0.9
SND1-205ENST00000467238 CHRNA5P30532 468 aa9.41□□□□□ -0.9
SND1-205ENST00000467238 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
SND1-205ENST00000467238 TPRNQ4KMQ1 711 aa9.41□□□□□ -0.9
SND1-205ENST00000467238 DALRD3Q5D0E6 543 aaKnown RBP9.41□□□□□ -0.9
SND1-205ENST00000467238 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
SND1-205ENST00000467238 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
SND1-205ENST00000467238 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
SND1-205ENST00000467238 ARFGEF2Q9Y6D5 1785 aa9.41□□□□□ -0.9
SND1-205ENST00000467238 TNRC6CQ9HCJ0 1690 aaKnown RBP9.4□□□□□ -0.9
SND1-205ENST00000467238 A0A087WZG4 1122 aa9.4□□□□□ -0.9
SND1-205ENST00000467238 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
SND1-205ENST00000467238 TERTO14746 1132 aaKnown RBP9.4□□□□□ -0.9
SND1-205ENST00000467238 SEMA3EO15041 775 aa9.4□□□□□ -0.9
SND1-205ENST00000467238 KCNQ3O43525 872 aa9.4□□□□□ -0.9
SND1-205ENST00000467238 CFHP08603 1231 aa9.4□□□□□ -0.9
SND1-205ENST00000467238 U2AF1L5P0DN76 240 aaPredicted RBP9.4□□□□□ -0.9
SND1-205ENST00000467238 U2AF1Q01081 240 aaKnown RBP eCLIP9.4□□□□□ -0.9
SND1-205ENST00000467238 FMNL2Q96PY5 1086 aa9.4□□□□□ -0.9
SND1-205ENST00000467238 SLX4Q8IY92 1834 aa9.4□□□□□ -0.91
SND1-205ENST00000467238 TIAM2Q8IVF5 1701 aa9.39□□□□□ -0.91
SND1-205ENST00000467238 CARMIL3Q8ND23 1372 aa9.39□□□□□ -0.91
SND1-205ENST00000467238 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
SND1-205ENST00000467238 SERPINB2P05120 415 aa9.39□□□□□ -0.91
SND1-205ENST00000467238 IL6STP40189 918 aaPredicted RBP9.39□□□□□ -0.91
SND1-205ENST00000467238 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
SND1-205ENST00000467238 DNAJB2P25686 324 aa9.38□□□□□ -0.91
SND1-205ENST00000467238 PTGDRQ13258 359 aa9.38□□□□□ -0.91
SND1-205ENST00000467238 KMT5BQ4FZB7 885 aa9.38□□□□□ -0.91
SND1-205ENST00000467238 C9orf131Q5VYM1 1079 aa9.38□□□□□ -0.91
SND1-205ENST00000467238 TBC1D9BQ66K14 1250 aa9.38□□□□□ -0.91
SND1-205ENST00000467238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
SND1-205ENST00000467238 MCM10Q7L590 875 aa9.38□□□□□ -0.91
SND1-205ENST00000467238 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
SND1-205ENST00000467238 A1BGP04217 495 aa9.37□□□□□ -0.91
SND1-205ENST00000467238 SLC10A3P09131 477 aa9.37□□□□□ -0.91
SND1-205ENST00000467238 PRKCSHP14314 528 aaPredicted RBP9.37□□□□□ -0.91
SND1-205ENST00000467238 HSPA6P17066 643 aa9.37□□□□□ -0.91
SND1-205ENST00000467238 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
SND1-205ENST00000467238 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
SND1-205ENST00000467238 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
SND1-205ENST00000467238 RTF1Q92541 710 aaKnown RBP9.37□□□□□ -0.91
SND1-205ENST00000467238 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
SND1-205ENST00000467238 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
SND1-205ENST00000467238 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 NR1I2O75469 434 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 CAMTA2O94983 1202 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 RPIAP49247 311 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 DCTN1Q14203 1278 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 SMYD5Q6GMV2 418 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 SCUBE3Q8IX30 993 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 TTLL6Q8N841 843 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 USP16Q9Y5T5 823 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 WDR90Q96KV7 1748 aa9.36□□□□□ -0.91
SND1-205ENST00000467238 H0YIN7 160 aa9.35□□□□□ -0.91
SND1-205ENST00000467238 SNRPA1P09661 255 aaKnown RBP9.35□□□□□ -0.91
SND1-205ENST00000467238 PIP4K2AP48426 406 aaPredicted RBP9.35□□□□□ -0.91
SND1-205ENST00000467238 RASSF7Q02833 373 aa9.35□□□□□ -0.91
SND1-205ENST00000467238 PRR5LQ6MZQ0 368 aa9.35□□□□□ -0.91
SND1-205ENST00000467238 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
SND1-205ENST00000467238 C2CD5Q86YS7 1000 aa9.35□□□□□ -0.91
SND1-205ENST00000467238 NMRK2Q9NPI5 230 aa9.35□□□□□ -0.91
SND1-205ENST00000467238 ATP13A2Q9NQ11 1180 aa9.35□□□□□ -0.91
SND1-205ENST00000467238 TOMM70O94826 608 aa9.34□□□□□ -0.91
SND1-205ENST00000467238 PRELPP51888 382 aa9.34□□□□□ -0.91
SND1-205ENST00000467238 TAF7Q15545 349 aaPredicted RBP9.34□□□□□ -0.91
SND1-205ENST00000467238 DZIP3Q86Y13 1208 aaKnown RBP9.34□□□□□ -0.91
SND1-205ENST00000467238 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.91
SND1-205ENST00000467238 BRIP1Q9BX63 1249 aa9.34□□□□□ -0.91
SND1-205ENST00000467238 ZC3H4Q9UPT8 1303 aaKnown RBP9.33□□□□□ -0.92
SND1-205ENST00000467238 LMNB1P20700 586 aa9.33□□□□□ -0.92
SND1-205ENST00000467238 PDE6BP35913 854 aa9.33□□□□□ -0.92
SND1-205ENST00000467238 NBPF10Q6P3W6 841 aaKnown RBP9.33□□□□□ -0.92
SND1-205ENST00000467238 CLEC4GQ6UXB4 293 aa9.33□□□□□ -0.92
SND1-205ENST00000467238 CCDC24Q8N4L8 307 aa9.33□□□□□ -0.92
SND1-205ENST00000467238 NBPF15Q8N660 670 aa9.33□□□□□ -0.92
SND1-205ENST00000467238 CNBD1Q8NA66 436 aa9.33□□□□□ -0.92
SND1-205ENST00000467238 SETDB2Q96T68 719 aa9.33□□□□□ -0.92
SND1-205ENST00000467238 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
SND1-205ENST00000467238 NFKBIEO00221 500 aa9.32□□□□□ -0.92
SND1-205ENST00000467238 NEFMP07197 916 aa9.32□□□□□ -0.92
SND1-205ENST00000467238 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
SND1-205ENST00000467238 ZNF622Q969S3 477 aaKnown RBP eCLIP9.32□□□□□ -0.92
SND1-205ENST00000467238 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
SND1-205ENST00000467238 SPSB2Q99619 263 aa9.32□□□□□ -0.92
SND1-205ENST00000467238 MIS18AQ9NYP9 233 aa9.32□□□□□ -0.92
SND1-205ENST00000467238 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
SND1-205ENST00000467238 ANKRD36CQ5JPF3 1778 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms