RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 SDSP20132 328 aa15.95■□□□□ 0.14
COL4A1-202ENST00000467182 CDC5LQ99459 802 aaKnown RBP15.95■□□□□ 0.14
COL4A1-202ENST00000467182 DBNDD2Q9BQY9 259 aa15.95■□□□□ 0.14
COL4A1-202ENST00000467182 CNNM1Q9NRU3 951 aa15.95■□□□□ 0.14
COL4A1-202ENST00000467182 ECHDC1Q9NTX5 307 aa15.95■□□□□ 0.14
COL4A1-202ENST00000467182 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
COL4A1-202ENST00000467182 IGHMBP2P38935 993 aaKnown RBP15.94■□□□□ 0.14
COL4A1-202ENST00000467182 TIMM10P62072 90 aa15.94■□□□□ 0.14
COL4A1-202ENST00000467182 METTL24Q5JXM2 366 aa15.94■□□□□ 0.14
COL4A1-202ENST00000467182 A0A1B0GUL7 405 aa15.93■□□□□ 0.14
COL4A1-202ENST00000467182 PDE8BO95263 885 aa15.93■□□□□ 0.14
COL4A1-202ENST00000467182 FGFR2P21802 821 aa15.93■□□□□ 0.14
COL4A1-202ENST00000467182 ANKRD18AQ8IVF6 992 aa15.93■□□□□ 0.14
COL4A1-202ENST00000467182 BSDC1Q9NW68 430 aaPredicted RBP15.93■□□□□ 0.14
COL4A1-202ENST00000467182 AK9Q5TCS8 1911 aa15.93■□□□□ 0.14
COL4A1-202ENST00000467182 LRRC37AA6NMS7 1700 aa15.92■□□□□ 0.14
COL4A1-202ENST00000467182 NPHP1O15259 732 aa15.92■□□□□ 0.14
COL4A1-202ENST00000467182 GLRX3O76003 335 aaKnown RBP15.92■□□□□ 0.14
COL4A1-202ENST00000467182 HOXA10P31260 410 aaPredicted RBP15.92■□□□□ 0.14
COL4A1-202ENST00000467182 RPS8P62241 208 aaKnown RBP15.92■□□□□ 0.14
COL4A1-202ENST00000467182 MPHOSPH8Q99549 860 aa15.92■□□□□ 0.14
COL4A1-202ENST00000467182 BRIP1Q9BX63 1249 aa15.92■□□□□ 0.14
COL4A1-202ENST00000467182 AKAP2Q9Y2D5 859 aa15.92■□□□□ 0.14
COL4A1-202ENST00000467182 PARP3Q9Y6F1 533 aa15.92■□□□□ 0.14
COL4A1-202ENST00000467182 SEC24BO95487 1268 aa15.91■□□□□ 0.14
COL4A1-202ENST00000467182 ADORA1P30542 326 aa15.91■□□□□ 0.14
COL4A1-202ENST00000467182 CHRNDQ07001 517 aa15.91■□□□□ 0.14
COL4A1-202ENST00000467182 GRAPQ13588 217 aa15.91■□□□□ 0.14
COL4A1-202ENST00000467182 ATP2B3Q16720 1220 aa15.91■□□□□ 0.14
COL4A1-202ENST00000467182 DDX46Q7L014 1031 aaKnown RBP15.91■□□□□ 0.14
COL4A1-202ENST00000467182 HELBQ8NG08 1087 aaPredicted RBP15.91■□□□□ 0.14
COL4A1-202ENST00000467182 GRAPLQ8TC17 118 aaPredicted RBP15.91■□□□□ 0.14
COL4A1-202ENST00000467182 GPATCH3Q96I76 525 aa15.91■□□□□ 0.14
COL4A1-202ENST00000467182 MINPP1Q9UNW1 487 aa15.91■□□□□ 0.14
COL4A1-202ENST00000467182 ERC2O15083 957 aa15.9■□□□□ 0.14
COL4A1-202ENST00000467182 ATP5JP18859 108 aa15.9■□□□□ 0.14
COL4A1-202ENST00000467182 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
COL4A1-202ENST00000467182 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
COL4A1-202ENST00000467182 XAGE2Q96GT9 111 aa15.9■□□□□ 0.14
COL4A1-202ENST00000467182 NEUROD6Q96NK8 337 aa15.9■□□□□ 0.14
COL4A1-202ENST00000467182 SNAP23O00161 211 aa15.89■□□□□ 0.13
COL4A1-202ENST00000467182 CDC45O75419 566 aa15.89■□□□□ 0.13
COL4A1-202ENST00000467182 TAF5LO75529 589 aa15.89■□□□□ 0.13
COL4A1-202ENST00000467182 PUM3Q15397 648 aaKnown RBP15.89■□□□□ 0.13
COL4A1-202ENST00000467182 TBC1D9Q6ZT07 1266 aa15.89■□□□□ 0.13
COL4A1-202ENST00000467182 KIF13BQ9NQT8 1826 aa15.89■□□□□ 0.13
COL4A1-202ENST00000467182 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
COL4A1-202ENST00000467182 AKAP11Q9UKA4 1901 aa15.88■□□□□ 0.13
COL4A1-202ENST00000467182 MAP4K4O95819 1239 aaPredicted RBP15.88■□□□□ 0.13
COL4A1-202ENST00000467182 LPIN2Q92539 896 aa15.88■□□□□ 0.13
COL4A1-202ENST00000467182 RBM17Q96I25 401 aaKnown RBP15.88■□□□□ 0.13
COL4A1-202ENST00000467182 CRAMP1Q96RY5 1269 aa15.88■□□□□ 0.13
COL4A1-202ENST00000467182 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
COL4A1-202ENST00000467182 C10orf71Q711Q0 1435 aa15.87■□□□□ 0.13
COL4A1-202ENST00000467182 WTIPA6NIX2 430 aaPredicted RBP15.87■□□□□ 0.13
COL4A1-202ENST00000467182 SRGNP10124 158 aa15.87■□□□□ 0.13
COL4A1-202ENST00000467182 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.87■□□□□ 0.13
COL4A1-202ENST00000467182 RPGRQ92834 1020 aaKnown RBP15.87■□□□□ 0.13
COL4A1-202ENST00000467182 BOLA2Q9H3K6 86 aa15.87■□□□□ 0.13
COL4A1-202ENST00000467182 TRIM6-TRIM34B2RNG4 842 aa15.86■□□□□ 0.13
COL4A1-202ENST00000467182 PDE6BP35913 854 aa15.86■□□□□ 0.13
COL4A1-202ENST00000467182 ZNF512BQ96KM6 892 aaPredicted RBP15.86■□□□□ 0.13
COL4A1-202ENST00000467182 HAUS7Q99871 368 aa15.86■□□□□ 0.13
COL4A1-202ENST00000467182 IRS2Q9Y4H2 1338 aa15.86■□□□□ 0.13
COL4A1-202ENST00000467182 KIAA1551Q9HCM1 1747 aa15.85■□□□□ 0.13
COL4A1-202ENST00000467182 CACNA1SQ13698 1873 aa15.85■□□□□ 0.13
COL4A1-202ENST00000467182 SLC5A1P13866 664 aa15.85■□□□□ 0.13
COL4A1-202ENST00000467182 NPR1P16066 1061 aa15.85■□□□□ 0.13
COL4A1-202ENST00000467182 RILPL2Q969X0 211 aa15.85■□□□□ 0.13
COL4A1-202ENST00000467182 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
COL4A1-202ENST00000467182 BBOX1O75936 387 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 CHMLP26374 656 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 ARID4AP29374 1257 aaPredicted RBP15.84■□□□□ 0.13
COL4A1-202ENST00000467182 UBE4AQ14139 1066 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 SCARF1Q14162 830 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
COL4A1-202ENST00000467182 CNTROBQ8N137 903 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 EVI5LQ96CN4 794 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 EDC3Q96F86 508 aaKnown RBP15.84■□□□□ 0.13
COL4A1-202ENST00000467182 ANKRD2Q9GZV1 360 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 NDUFB9Q9Y6M9 179 aa15.84■□□□□ 0.13
COL4A1-202ENST00000467182 PHKA1P46020 1223 aa15.83■□□□□ 0.12
COL4A1-202ENST00000467182 CCDC158Q5M9N0 1113 aa15.83■□□□□ 0.12
COL4A1-202ENST00000467182 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
COL4A1-202ENST00000467182 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
COL4A1-202ENST00000467182 MASTLQ96GX5 879 aa15.83■□□□□ 0.12
COL4A1-202ENST00000467182 IFIT1P09914 478 aaKnown RBP15.82■□□□□ 0.12
COL4A1-202ENST00000467182 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
COL4A1-202ENST00000467182 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
COL4A1-202ENST00000467182 ZNF804BA4D1E1 1349 aa15.82■□□□□ 0.12
COL4A1-202ENST00000467182 DUOX1Q9NRD9 1551 aa15.82■□□□□ 0.12
COL4A1-202ENST00000467182 ZBTB7AO95365 584 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 KLRK1P26718 216 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 MCAMP43121 646 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 GPSM2P81274 684 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 RFX7Q2KHR2 1363 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 GORABQ5T7V8 394 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 STYK1Q6J9G0 422 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 SLX4Q8IY92 1834 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms