RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
CMC1-205ENST00000466830 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
CMC1-205ENST00000466830 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
CMC1-205ENST00000466830 TMEM266Q2M3C6 531 aa12.99□□□□□ -0.33
CMC1-205ENST00000466830 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
CMC1-205ENST00000466830 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
CMC1-205ENST00000466830 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
CMC1-205ENST00000466830 CPA1P15085 419 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 PLBD2Q8NHP8 589 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 RTN1Q16799 776 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 SPA17Q15506 151 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 TCP11L1Q9NUJ3 509 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 BMP15O95972 392 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 KIF4BQ2VIQ3 1234 aa12.98□□□□□ -0.33
CMC1-205ENST00000466830 PTPDC1A2A3K4 754 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 UBA7P41226 1012 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 TYRO3Q06418 890 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 NBPF5PQ86XG9 351 aaPredicted RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 CPLX3Q8WVH0 158 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 DNAJC25Q9H1X3 360 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 ERLIN2O94905 339 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 PDCL3Q9H2J4 239 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 SNX14Q9Y5W7 946 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 PREX2Q70Z35 1606 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 IRS4O14654 1257 aaPredicted RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 CASQ1P31415 396 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 RDXP35241 583 aaKnown RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 CCDC186Q7Z3E2 898 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 HELLSQ9NRZ9 838 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 SPTLC2O15270 562 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 NOLC1Q14978 699 aaKnown RBP eCLIP12.97□□□□□ -0.33
CMC1-205ENST00000466830 TNNI3KQ59H18 835 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 NUP88Q99567 741 aaPredicted RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 IQSEC3Q9UPP2 1182 aaPredicted RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 FPGT-TNNI3KV9GXZ4 949 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 EYA2O00167 538 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 FGFR1OPO95684 399 aaKnown RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 TSG101Q99816 390 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
CMC1-205ENST00000466830 GBP3Q9H0R5 595 aa12.97□□□□□ -0.33
CMC1-205ENST00000466830 NIP7Q9Y221 180 aaKnown RBP eCLIP12.97□□□□□ -0.33
CMC1-205ENST00000466830 RTL1A6NKG5 1358 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 UGGT1Q9NYU2 1555 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 CHST3Q7LGC8 479 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 GOLGA6L9A6NEM1 432 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 GOLGA6L10A6NI86 522 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 YEATS4O95619 227 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 DYNC1I1O14576 645 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 LTKP29376 864 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
CMC1-205ENST00000466830 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
CMC1-205ENST00000466830 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.34
CMC1-205ENST00000466830 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.34
CMC1-205ENST00000466830 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.34
CMC1-205ENST00000466830 GNAT2P19087 354 aa12.96□□□□□ -0.34
CMC1-205ENST00000466830 RPS6KB1P23443 525 aa12.96□□□□□ -0.34
CMC1-205ENST00000466830 TIMM10P62072 90 aa12.96□□□□□ -0.34
CMC1-205ENST00000466830 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.34
CMC1-205ENST00000466830 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.34
CMC1-205ENST00000466830 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.34
CMC1-205ENST00000466830 DDB1Q16531 1140 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 DBNDD2Q9BQY9 259 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 CGNQ9P2M7 1197 aaKnown RBP12.95□□□□□ -0.34
CMC1-205ENST00000466830 ZFYVE16Q7Z3T8 1539 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 SLC27A2O14975 620 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 GSPT1P15170 499 aaKnown RBP12.95□□□□□ -0.34
CMC1-205ENST00000466830 MARCKSP29966 332 aaPredicted RBP12.95□□□□□ -0.34
CMC1-205ENST00000466830 AMPD3Q01432 767 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 NAA16Q6N069 864 aaPredicted RBP12.95□□□□□ -0.34
CMC1-205ENST00000466830 SUCLG2Q96I99 432 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 MLH3Q9UHC1 1453 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 PAXBP1Q9Y5B6 917 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 CACNA2D4Q7Z3S7 1137 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 TAF4BQ92750 862 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 KIF20AO95235 890 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
CMC1-205ENST00000466830 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
CMC1-205ENST00000466830 A0A1B0GUL7 405 aa12.94□□□□□ -0.34
CMC1-205ENST00000466830 H0YHG0 523 aa12.94□□□□□ -0.34
CMC1-205ENST00000466830 UBASH3AP57075 661 aa12.94□□□□□ -0.34
CMC1-205ENST00000466830 SKIDA1Q1XH10 827 aa12.94□□□□□ -0.34
CMC1-205ENST00000466830 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
CMC1-205ENST00000466830 CALML4Q96GE6 196 aa12.94□□□□□ -0.34
CMC1-205ENST00000466830 TTC12Q9H892 705 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms