RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 TAF1P21675 1872 aa20.28■□□□□ 0.84
COL16A1-207ENST00000466829 NEFLP07196 543 aa20.28■□□□□ 0.84
COL16A1-207ENST00000466829 DOK7Q18PE1 504 aa20.28■□□□□ 0.84
COL16A1-207ENST00000466829 MAP1SQ66K74 1059 aaPredicted RBP20.28■□□□□ 0.84
COL16A1-207ENST00000466829 CNTROBQ8N137 903 aa20.28■□□□□ 0.84
COL16A1-207ENST00000466829 SCN4AP35499 1836 aa20.27■□□□□ 0.84
COL16A1-207ENST00000466829 SLC4A10Q6U841 1118 aa20.27■□□□□ 0.84
COL16A1-207ENST00000466829 GPRC5DQ9NZD1 345 aa20.27■□□□□ 0.84
COL16A1-207ENST00000466829 ECE2O60344 883 aa20.26■□□□□ 0.83
COL16A1-207ENST00000466829 IGHMBP2P38935 993 aaKnown RBP20.26■□□□□ 0.83
COL16A1-207ENST00000466829 USP50Q70EL3 339 aaPredicted RBP20.26■□□□□ 0.83
COL16A1-207ENST00000466829 ADARB2Q9NS39 739 aaKnown RBP20.26■□□□□ 0.83
COL16A1-207ENST00000466829 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
COL16A1-207ENST00000466829 YDJCA8MPS7 323 aa20.25■□□□□ 0.83
COL16A1-207ENST00000466829 CREBZFQ9NS37 354 aa20.25■□□□□ 0.83
COL16A1-207ENST00000466829 CHMP3Q9Y3E7 222 aa20.25■□□□□ 0.83
COL16A1-207ENST00000466829 XDHP47989 1333 aa20.25■□□□□ 0.83
COL16A1-207ENST00000466829 H7C1D1 291 aa20.24■□□□□ 0.83
COL16A1-207ENST00000466829 ATP2B4P23634 1241 aa20.24■□□□□ 0.83
COL16A1-207ENST00000466829 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
COL16A1-207ENST00000466829 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
COL16A1-207ENST00000466829 C9orf78Q9NZ63 289 aaPredicted RBP20.24■□□□□ 0.83
COL16A1-207ENST00000466829 RCAN3Q9UKA8 241 aa20.24■□□□□ 0.83
COL16A1-207ENST00000466829 PSMD14O00487 310 aa20.23■□□□□ 0.83
COL16A1-207ENST00000466829 ITGBL1O95965 494 aaPredicted RBP20.23■□□□□ 0.83
COL16A1-207ENST00000466829 ITGA6P23229 1130 aa20.23■□□□□ 0.83
COL16A1-207ENST00000466829 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
COL16A1-207ENST00000466829 PLA2G12BQ9BX93 195 aa20.23■□□□□ 0.83
COL16A1-207ENST00000466829 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
COL16A1-207ENST00000466829 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
COL16A1-207ENST00000466829 COL4A1P02462 1669 aa20.22■□□□□ 0.83
COL16A1-207ENST00000466829 TMEM88BA6NKF7 163 aa20.22■□□□□ 0.83
COL16A1-207ENST00000466829 FAM161AQ3B820 660 aa20.22■□□□□ 0.83
COL16A1-207ENST00000466829 MKRN1Q9UHC7 482 aaKnown RBP20.22■□□□□ 0.83
COL16A1-207ENST00000466829 MINPP1Q9UNW1 487 aa20.22■□□□□ 0.83
COL16A1-207ENST00000466829 PASKQ96RG2 1323 aa20.22■□□□□ 0.83
COL16A1-207ENST00000466829 DUOX1Q9NRD9 1551 aa20.21■□□□□ 0.83
COL16A1-207ENST00000466829 CASP7P55210 303 aa20.21■□□□□ 0.83
COL16A1-207ENST00000466829 MICALL2Q8IY33 904 aa20.21■□□□□ 0.83
COL16A1-207ENST00000466829 SRCIN1Q9C0H9 1055 aa20.21■□□□□ 0.83
COL16A1-207ENST00000466829 KCNQ5Q9NR82 932 aa20.21■□□□□ 0.83
COL16A1-207ENST00000466829 LRRC37AA6NMS7 1700 aa20.21■□□□□ 0.83
COL16A1-207ENST00000466829 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
COL16A1-207ENST00000466829 ANKRD18BA2A2Z9 1011 aa20.2■□□□□ 0.82
COL16A1-207ENST00000466829 GRM8O00222 908 aa20.2■□□□□ 0.82
COL16A1-207ENST00000466829 ERICH6BQ5W0A0 696 aa20.2■□□□□ 0.82
COL16A1-207ENST00000466829 ALDH1L1O75891 902 aa20.19■□□□□ 0.82
COL16A1-207ENST00000466829 CSF1RP07333 972 aa20.19■□□□□ 0.82
COL16A1-207ENST00000466829 KCNJ4P48050 445 aa20.19■□□□□ 0.82
COL16A1-207ENST00000466829 IFIT5Q13325 482 aaKnown RBP20.19■□□□□ 0.82
COL16A1-207ENST00000466829 TAF7LQ5H9L4 462 aa20.19■□□□□ 0.82
COL16A1-207ENST00000466829 MRPL50Q8N5N7 158 aaKnown RBP20.19■□□□□ 0.82
COL16A1-207ENST00000466829 RPS12P25398 132 aaKnown RBP20.18■□□□□ 0.82
COL16A1-207ENST00000466829 CCT4P50991 539 aaKnown RBP20.18■□□□□ 0.82
COL16A1-207ENST00000466829 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
COL16A1-207ENST00000466829 JMYQ8N9B5 988 aa20.18■□□□□ 0.82
COL16A1-207ENST00000466829 DPF2Q92785 391 aa20.18■□□□□ 0.82
COL16A1-207ENST00000466829 ANKRD2Q9GZV1 360 aa20.18■□□□□ 0.82
COL16A1-207ENST00000466829 ABT1Q9ULW3 272 aaKnown RBP20.18■□□□□ 0.82
COL16A1-207ENST00000466829 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
COL16A1-207ENST00000466829 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
COL16A1-207ENST00000466829 CCDC57Q2TAC2 916 aa20.17■□□□□ 0.82
COL16A1-207ENST00000466829 LMBR1LQ6UX01 489 aa20.17■□□□□ 0.82
COL16A1-207ENST00000466829 TRPM4Q8TD43 1214 aa20.17■□□□□ 0.82
COL16A1-207ENST00000466829 SSH1Q8WYL5 1049 aa20.17■□□□□ 0.82
COL16A1-207ENST00000466829 FBXW7Q969H0 707 aa20.17■□□□□ 0.82
COL16A1-207ENST00000466829 LTBP1Q14766 1721 aa20.16■□□□□ 0.82
COL16A1-207ENST00000466829 TRAF5O00463 557 aa20.16■□□□□ 0.82
COL16A1-207ENST00000466829 FOXO4P98177 505 aa20.16■□□□□ 0.82
COL16A1-207ENST00000466829 TBC1D10BQ4KMP7 808 aaPredicted RBP20.16■□□□□ 0.82
COL16A1-207ENST00000466829 SMC4Q9NTJ3 1288 aa20.16■□□□□ 0.82
COL16A1-207ENST00000466829 LEMD3Q9Y2U8 911 aa20.16■□□□□ 0.82
COL16A1-207ENST00000466829 CACNA1FO60840 1977 aa20.15■□□□□ 0.82
COL16A1-207ENST00000466829 WTIPA6NIX2 430 aaPredicted RBP20.15■□□□□ 0.82
COL16A1-207ENST00000466829 VIL1P09327 827 aaKnown RBP20.15■□□□□ 0.82
COL16A1-207ENST00000466829 SAMD7Q7Z3H4 446 aa20.15■□□□□ 0.82
COL16A1-207ENST00000466829 PTPRCP08575 1304 aa20.15■□□□□ 0.82
COL16A1-207ENST00000466829 ZNF804BA4D1E1 1349 aa20.14■□□□□ 0.81
COL16A1-207ENST00000466829 USP17L3A6NCW0 530 aa20.14■□□□□ 0.81
COL16A1-207ENST00000466829 USP17L4A6NCW7 530 aa20.14■□□□□ 0.81
COL16A1-207ENST00000466829 HIRAP54198 1017 aaPredicted RBP20.14■□□□□ 0.81
COL16A1-207ENST00000466829 FMR1Q06787 632 aaKnown RBP eCLIP20.14■□□□□ 0.81
COL16A1-207ENST00000466829 USP17L1Q7RTZ2 530 aa20.14■□□□□ 0.81
COL16A1-207ENST00000466829 PODNQ7Z5L7 613 aa20.14■□□□□ 0.81
COL16A1-207ENST00000466829 ZC3H15Q8WU90 426 aaKnown RBP20.14■□□□□ 0.81
COL16A1-207ENST00000466829 CHRNDQ07001 517 aa20.13■□□□□ 0.81
COL16A1-207ENST00000466829 EPHA10Q5JZY3 1008 aa20.13■□□□□ 0.81
COL16A1-207ENST00000466829 RSBN1LQ6PCB5 846 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-207ENST00000466829 PAXIP1Q6ZW49 1069 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-207ENST00000466829 GLIS2Q9BZE0 524 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-207ENST00000466829 ZNF408Q9H9D4 720 aa20.13■□□□□ 0.81
COL16A1-207ENST00000466829 CNTNAP1P78357 1384 aa20.12■□□□□ 0.81
COL16A1-207ENST00000466829 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
COL16A1-207ENST00000466829 PLIN1O60240 522 aa20.12■□□□□ 0.81
COL16A1-207ENST00000466829 DEFB115Q30KQ5 88 aa20.12■□□□□ 0.81
COL16A1-207ENST00000466829 ALDH1L2Q3SY69 923 aa20.12■□□□□ 0.81
COL16A1-207ENST00000466829 LDHAL6AQ6ZMR3 332 aa20.12■□□□□ 0.81
COL16A1-207ENST00000466829 CDC37L1Q7L3B6 337 aa20.12■□□□□ 0.81
COL16A1-207ENST00000466829 HELBQ8NG08 1087 aaPredicted RBP20.12■□□□□ 0.81
COL16A1-207ENST00000466829 CNNM1Q9NRU3 951 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms