RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 EIF2AK2P19525 551 aaKnown RBP7.48□□□□□ -1.21
EDEM3-205ENST00000466606 CES1P23141 567 aa7.48□□□□□ -1.21
EDEM3-205ENST00000466606 SIK1P57059 783 aa7.48□□□□□ -1.21
EDEM3-205ENST00000466606 ORC1Q13415 861 aa7.48□□□□□ -1.21
EDEM3-205ENST00000466606 PERM1Q5SV97 790 aa7.48□□□□□ -1.21
EDEM3-205ENST00000466606 PSAPL1Q6NUJ1 521 aa7.48□□□□□ -1.21
EDEM3-205ENST00000466606 LRRC4BQ9NT99 713 aa7.48□□□□□ -1.21
EDEM3-205ENST00000466606 M0R082 166 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 HOXB4P17483 251 aaPredicted RBP7.47□□□□□ -1.21
EDEM3-205ENST00000466606 SOX18P35713 384 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 HYAL2Q12891 473 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 PDE3BQ13370 1112 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 USPL1Q5W0Q7 1092 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 ZNF417Q8TAU3 575 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 SNX29Q8TEQ0 813 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 CITED4Q96RK1 184 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 ZNF587Q96SQ5 575 aaPredicted RBP7.47□□□□□ -1.21
EDEM3-205ENST00000466606 CNTNAP5Q8WYK1 1306 aa7.47□□□□□ -1.21
EDEM3-205ENST00000466606 TRPA1O75762 1119 aa7.46□□□□□ -1.22
EDEM3-205ENST00000466606 ATP11AP98196 1134 aa7.46□□□□□ -1.22
EDEM3-205ENST00000466606 ELMSAN1Q6PJG2 1045 aa7.46□□□□□ -1.22
EDEM3-205ENST00000466606 NCAPG2Q86XI2 1143 aa7.46□□□□□ -1.22
EDEM3-205ENST00000466606 MICALL1Q8N3F8 863 aa7.46□□□□□ -1.22
EDEM3-205ENST00000466606 LPIN3Q9BQK8 851 aa7.46□□□□□ -1.22
EDEM3-205ENST00000466606 SMG9Q9H0W8 520 aaKnown RBP7.46□□□□□ -1.22
EDEM3-205ENST00000466606 ZFYVE28Q9HCC9 887 aa7.46□□□□□ -1.22
EDEM3-205ENST00000466606 JPH1Q9HDC5 661 aaPredicted RBP7.46□□□□□ -1.22
EDEM3-205ENST00000466606 GHRHP01286 108 aa7.45□□□□□ -1.22
EDEM3-205ENST00000466606 PCSK7Q16549 785 aa7.45□□□□□ -1.22
EDEM3-205ENST00000466606 C20orf204Q6ZNR8 217 aa7.45□□□□□ -1.22
EDEM3-205ENST00000466606 STK17AQ9UEE5 414 aa7.45□□□□□ -1.22
EDEM3-205ENST00000466606 SALL4Q9UJQ4 1053 aa7.45□□□□□ -1.22
EDEM3-205ENST00000466606 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
EDEM3-205ENST00000466606 HOXD8P13378 290 aaPredicted RBP7.44□□□□□ -1.22
EDEM3-205ENST00000466606 DGKGP49619 791 aa7.44□□□□□ -1.22
EDEM3-205ENST00000466606 ZSCAN29Q8IWY8 852 aaPredicted RBP7.44□□□□□ -1.22
EDEM3-205ENST00000466606 PLD4Q96BZ4 506 aa7.44□□□□□ -1.22
EDEM3-205ENST00000466606 SPACA7Q96KW9 195 aa7.44□□□□□ -1.22
EDEM3-205ENST00000466606 DMRTB1Q96MA1 342 aa7.44□□□□□ -1.22
EDEM3-205ENST00000466606 RASSF4Q9H2L5 321 aa7.44□□□□□ -1.22
EDEM3-205ENST00000466606 LATS2Q9NRM7 1088 aa7.44□□□□□ -1.22
EDEM3-205ENST00000466606 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 LILRB5O75023 590 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 KIF4AO95239 1232 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 PLCB3Q01970 1234 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 KANK3Q6NY19 840 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 ASB16Q96NS5 453 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 HHIPQ96QV1 700 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 AMOTL2Q9Y2J4 779 aa7.43□□□□□ -1.22
EDEM3-205ENST00000466606 EIF1AYO14602 144 aaKnown RBP7.42□□□□□ -1.22
EDEM3-205ENST00000466606 MAPK8P45983 427 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 DSC3Q14574 896 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 CEP135Q66GS9 1140 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 GDF6Q6KF10 455 aaPredicted RBP7.42□□□□□ -1.22
EDEM3-205ENST00000466606 CEP120Q8N960 986 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 PMEPA1Q969W9 287 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 CSRNP1Q96S65 589 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 RBSNQ9H1K0 784 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 SUV39H2Q9H5I1 410 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 TRIM33Q9UPN9 1127 aa7.42□□□□□ -1.22
EDEM3-205ENST00000466606 ANKRD33BA6NCL7 494 aa7.41□□□□□ -1.22
EDEM3-205ENST00000466606 TREHO43280 583 aa7.41□□□□□ -1.22
EDEM3-205ENST00000466606 CPNE3O75131 537 aaKnown RBP7.41□□□□□ -1.22
EDEM3-205ENST00000466606 AFF1P51825 1210 aaKnown RBP7.41□□□□□ -1.22
EDEM3-205ENST00000466606 COL9A3Q14050 684 aaPredicted RBP7.41□□□□□ -1.22
EDEM3-205ENST00000466606 ADAMTSL4Q6UY14 1074 aa7.41□□□□□ -1.22
EDEM3-205ENST00000466606 PODNQ7Z5L7 613 aa7.41□□□□□ -1.22
EDEM3-205ENST00000466606 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
EDEM3-205ENST00000466606 SETDB2Q96T68 719 aa7.41□□□□□ -1.22
EDEM3-205ENST00000466606 LACRTQ9GZZ8 138 aa7.41□□□□□ -1.22
EDEM3-205ENST00000466606 MKL2Q9ULH7 1088 aa7.41□□□□□ -1.22
EDEM3-205ENST00000466606 PNMA6FA0A0J9YX94 578 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 NEFLP07196 543 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 IRS1P35568 1242 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 GRIK5Q16478 980 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 TMCO4Q5TGY1 634 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 PEAR1Q5VY43 1037 aaPredicted RBP7.4□□□□□ -1.22
EDEM3-205ENST00000466606 BEND7Q8N7W2 519 aaPredicted RBP7.4□□□□□ -1.22
EDEM3-205ENST00000466606 TRIM11Q96F44 468 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 OSMRQ99650 979 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 ZKSCAN3Q9BRR0 538 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 PBX4Q9BYU1 374 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 NPHS2Q9NP85 383 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 FRRS1LQ9P0K9 344 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 WWC3Q9ULE0 1092 aa7.4□□□□□ -1.22
EDEM3-205ENST00000466606 P4HBP07237 508 aaKnown RBP7.39□□□□□ -1.23
EDEM3-205ENST00000466606 EDN3P14138 238 aa7.39□□□□□ -1.23
EDEM3-205ENST00000466606 NID1P14543 1247 aa7.39□□□□□ -1.23
EDEM3-205ENST00000466606 DNAJC14Q6Y2X3 702 aaPredicted RBP7.39□□□□□ -1.23
EDEM3-205ENST00000466606 GALNT12Q8IXK2 581 aa7.39□□□□□ -1.23
EDEM3-205ENST00000466606 CCDC74AQ96AQ1 378 aa7.39□□□□□ -1.23
EDEM3-205ENST00000466606 SCARF2Q96GP6 870 aaPredicted RBP7.39□□□□□ -1.23
EDEM3-205ENST00000466606 PLVAPQ9BX97 442 aa7.39□□□□□ -1.23
EDEM3-205ENST00000466606 DZANK1Q9NVP4 752 aa7.39□□□□□ -1.23
EDEM3-205ENST00000466606 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
EDEM3-205ENST00000466606 NFKBIEO00221 500 aa7.38□□□□□ -1.23
EDEM3-205ENST00000466606 SMNDC1O75940 238 aaKnown RBP eCLIP7.38□□□□□ -1.23
EDEM3-205ENST00000466606 CDC25BP30305 580 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms