RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 SASS6Q6UVJ0 657 aa22.92■■□□□ 1.26
LIMS2-212ENST00000466410 STOX1Q6ZVD7 989 aa22.92■■□□□ 1.26
LIMS2-212ENST00000466410 C17orf53Q8N3J3 647 aaPredicted RBP22.92■■□□□ 1.26
LIMS2-212ENST00000466410 BRF1Q92994 677 aa22.92■■□□□ 1.26
LIMS2-212ENST00000466410 GOLGA6L4A6NEF3 574 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 GOLIM4O00461 696 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 TIMM10P62072 90 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 CKAP2LQ8IYA6 745 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 DDX11Q96FC9 970 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 TYRO3Q06418 890 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 NOLC1Q14978 699 aaKnown RBP eCLIP22.91■■□□□ 1.26
LIMS2-212ENST00000466410 CADPS2Q86UW7 1296 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 MRVI1Q9Y6F6 885 aa22.91■■□□□ 1.26
LIMS2-212ENST00000466410 SH3TC1Q8TE82 1336 aa22.9■■□□□ 1.26
LIMS2-212ENST00000466410 RESTQ13127 1097 aa22.9■■□□□ 1.26
LIMS2-212ENST00000466410 FAM200AQ8TCP9 573 aa22.9■■□□□ 1.26
LIMS2-212ENST00000466410 PGBD1Q96JS3 809 aa22.9■■□□□ 1.26
LIMS2-212ENST00000466410 TNMDQ9H2S6 317 aa22.9■■□□□ 1.26
LIMS2-212ENST00000466410 TNS3Q68CZ2 1445 aa22.89■■□□□ 1.26
LIMS2-212ENST00000466410 LAMB4A4D0S4 1761 aa22.89■■□□□ 1.25
LIMS2-212ENST00000466410 SCRN1Q12765 414 aa22.89■■□□□ 1.25
LIMS2-212ENST00000466410 PAG1Q9NWQ8 432 aa22.89■■□□□ 1.25
LIMS2-212ENST00000466410 PLEKHG2Q9H7P9 1386 aa22.89■■□□□ 1.25
LIMS2-212ENST00000466410 DNTTIP2Q5QJE6 756 aaKnown RBP22.89■■□□□ 1.25
LIMS2-212ENST00000466410 CWC25Q9NXE8 425 aaPredicted RBP22.89■■□□□ 1.25
LIMS2-212ENST00000466410 PDCL3Q9H2J4 239 aa22.88■■□□□ 1.25
LIMS2-212ENST00000466410 FAM13BQ9NYF5 915 aa22.88■■□□□ 1.25
LIMS2-212ENST00000466410 STRCQ7RTU9 1775 aa22.88■■□□□ 1.25
LIMS2-212ENST00000466410 A1BGP04217 495 aa22.88■■□□□ 1.25
LIMS2-212ENST00000466410 FGD1P98174 961 aa22.88■■□□□ 1.25
LIMS2-212ENST00000466410 PALLDQ8WX93 1383 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 H3BQV1 296 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 IFFO2Q5TF58 517 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 LUZP1Q86V48 1076 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 SPC24Q8NBT2 197 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 ZNF594Q96JF6 807 aaPredicted RBP22.87■■□□□ 1.25
LIMS2-212ENST00000466410 A0A0G2JLW4 131 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 NR1I2O75469 434 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 LRRC24Q50LG9 513 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 DDX19AQ9NUU7 478 aaKnown RBP22.87■■□□□ 1.25
LIMS2-212ENST00000466410 LAMA4Q16363 1823 aa22.87■■□□□ 1.25
LIMS2-212ENST00000466410 DHX32Q7L7V1 743 aaKnown RBP22.86■■□□□ 1.25
LIMS2-212ENST00000466410 ZBTB3Q9H5J0 574 aa22.86■■□□□ 1.25
LIMS2-212ENST00000466410 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
LIMS2-212ENST00000466410 SMARCC2Q8TAQ2 1214 aa22.86■■□□□ 1.25
LIMS2-212ENST00000466410 KCNF1Q9H3M0 494 aa22.86■■□□□ 1.25
LIMS2-212ENST00000466410 CLSTN2Q9H4D0 955 aa22.86■■□□□ 1.25
LIMS2-212ENST00000466410 HELLSQ9NRZ9 838 aa22.86■■□□□ 1.25
LIMS2-212ENST00000466410 SPATA31A3Q5VYP0 1347 aa22.86■■□□□ 1.25
LIMS2-212ENST00000466410 PFKFB2O60825 505 aa22.85■■□□□ 1.25
LIMS2-212ENST00000466410 IL15P40933 162 aaPredicted RBP22.85■■□□□ 1.25
LIMS2-212ENST00000466410 BICD2Q8TD16 824 aa22.85■■□□□ 1.25
LIMS2-212ENST00000466410 GPR108Q9NPR9 543 aa22.85■■□□□ 1.25
LIMS2-212ENST00000466410 DYNC1I1O14576 645 aa22.85■■□□□ 1.25
LIMS2-212ENST00000466410 ANO6Q4KMQ2 910 aa22.85■■□□□ 1.25
LIMS2-212ENST00000466410 ZMYM1Q5SVZ6 1142 aa22.85■■□□□ 1.25
LIMS2-212ENST00000466410 RBM43Q6ZSC3 357 aaKnown RBP22.85■■□□□ 1.25
LIMS2-212ENST00000466410 HMGB1P09429 215 aaKnown RBP22.84■■□□□ 1.25
LIMS2-212ENST00000466410 APOBRQ0VD83 1088 aa22.84■■□□□ 1.25
LIMS2-212ENST00000466410 DSCC1Q9BVC3 393 aa22.84■■□□□ 1.25
LIMS2-212ENST00000466410 SPTLC3Q9NUV7 552 aa22.84■■□□□ 1.25
LIMS2-212ENST00000466410 CPDO75976 1380 aa22.84■■□□□ 1.25
LIMS2-212ENST00000466410 NSUN7Q8NE18 718 aaKnown RBP22.84■■□□□ 1.25
LIMS2-212ENST00000466410 CBX8Q9HC52 389 aa22.84■■□□□ 1.25
LIMS2-212ENST00000466410 EYA2O00167 538 aa22.83■■□□□ 1.25
LIMS2-212ENST00000466410 CTDNEP1O95476 244 aa22.83■■□□□ 1.25
LIMS2-212ENST00000466410 FOSBP53539 338 aa22.83■■□□□ 1.25
LIMS2-212ENST00000466410 ZSCAN16Q9H4T2 348 aaPredicted RBP22.83■■□□□ 1.25
LIMS2-212ENST00000466410 TJP1Q07157 1748 aa22.83■■□□□ 1.25
LIMS2-212ENST00000466410 HSPD1P10809 573 aaKnown RBP22.83■■□□□ 1.24
LIMS2-212ENST00000466410 EXOSC10Q01780 885 aaKnown RBP22.83■■□□□ 1.24
LIMS2-212ENST00000466410 CEBPZQ03701 1054 aaKnown RBP22.83■■□□□ 1.24
LIMS2-212ENST00000466410 BRINP3Q76B58 766 aa22.83■■□□□ 1.24
LIMS2-212ENST00000466410 ZCRB1Q8TBF4 217 aaKnown RBP22.83■■□□□ 1.24
LIMS2-212ENST00000466410 LLPHQ9BRT6 129 aaKnown RBP22.83■■□□□ 1.24
LIMS2-212ENST00000466410 PUS3Q9BZE2 481 aaKnown RBP22.83■■□□□ 1.24
LIMS2-212ENST00000466410 PARP4Q9UKK3 1724 aaKnown RBP22.83■■□□□ 1.24
LIMS2-212ENST00000466410 NUP188Q5SRE5 1749 aa22.82■■□□□ 1.24
LIMS2-212ENST00000466410 A0A1B0GUL7 405 aa22.82■■□□□ 1.24
LIMS2-212ENST00000466410 IFIT1P09914 478 aaKnown RBP22.82■■□□□ 1.24
LIMS2-212ENST00000466410 PYCARDQ9ULZ3 195 aa22.82■■□□□ 1.24
LIMS2-212ENST00000466410 CCDC191Q8NCU4 936 aa22.82■■□□□ 1.24
LIMS2-212ENST00000466410 MAST3O60307 1309 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 E7EWF7 191 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 ADD1P35611 737 aaKnown RBP22.81■■□□□ 1.24
LIMS2-212ENST00000466410 CCT2P78371 535 aaKnown RBP22.81■■□□□ 1.24
LIMS2-212ENST00000466410 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 ZNF335Q9H4Z2 1342 aaPredicted RBP22.81■■□□□ 1.24
LIMS2-212ENST00000466410 PTPDC1A2A3K4 754 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 GLIPR1L2Q4G1C9 344 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 KIAA1524Q8TCG1 905 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 AGXT2Q9BYV1 514 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 NCOA5Q9HCD5 579 aaKnown RBP22.81■■□□□ 1.24
LIMS2-212ENST00000466410 CFAP45Q9UL16 551 aa22.81■■□□□ 1.24
LIMS2-212ENST00000466410 PPFIA3O75145 1194 aa22.8■■□□□ 1.24
LIMS2-212ENST00000466410 FTOQ9C0B1 505 aaKnown RBP eCLIP22.8■■□□□ 1.24
LIMS2-212ENST00000466410 RNF113AO15541 343 aaKnown RBP22.8■■□□□ 1.24
LIMS2-212ENST00000466410 TOM1L2Q6ZVM7 507 aa22.8■■□□□ 1.24
LIMS2-212ENST00000466410 CHST3Q7LGC8 479 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms