RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 TAF5LO75529 589 aa16.29■□□□□ 0.2
UBE4B-206ENST00000466379 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
UBE4B-206ENST00000466379 KCNB2Q92953 911 aa16.29■□□□□ 0.2
UBE4B-206ENST00000466379 GBP4Q96PP9 640 aa16.29■□□□□ 0.2
UBE4B-206ENST00000466379 AKAP2Q9Y2D5 859 aa16.29■□□□□ 0.2
UBE4B-206ENST00000466379 TTC39AQ5SRH9 613 aa16.29■□□□□ 0.2
UBE4B-206ENST00000466379 MEX3CQ5U5Q3 659 aaKnown RBP16.29■□□□□ 0.2
UBE4B-206ENST00000466379 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
UBE4B-206ENST00000466379 RFX7Q2KHR2 1363 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 CYP2E1P05181 493 aaPredicted RBP16.28■□□□□ 0.2
UBE4B-206ENST00000466379 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBE4B-206ENST00000466379 SCARF1Q14162 830 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 RUFY3Q7L099 469 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
UBE4B-206ENST00000466379 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 TRAK2O60296 914 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
UBE4B-206ENST00000466379 NUCB2P80303 420 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 ATP2B3Q16720 1220 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 FOXD4L5Q5VV16 416 aaPredicted RBP16.28■□□□□ 0.2
UBE4B-206ENST00000466379 FOXD4L4Q8WXT5 416 aaPredicted RBP16.28■□□□□ 0.2
UBE4B-206ENST00000466379 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
UBE4B-206ENST00000466379 HSPA1LP34931 641 aa16.27■□□□□ 0.2
UBE4B-206ENST00000466379 MCMDC2Q4G0Z9 681 aa16.27■□□□□ 0.2
UBE4B-206ENST00000466379 CCDC158Q5M9N0 1113 aa16.27■□□□□ 0.2
UBE4B-206ENST00000466379 CERKQ8TCT0 537 aa16.27■□□□□ 0.2
UBE4B-206ENST00000466379 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
UBE4B-206ENST00000466379 ZSWIM6Q9HCJ5 1215 aa16.26■□□□□ 0.19
UBE4B-206ENST00000466379 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
UBE4B-206ENST00000466379 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
UBE4B-206ENST00000466379 BAG4O95429 457 aaKnown RBP16.26■□□□□ 0.19
UBE4B-206ENST00000466379 LARGE1O95461 756 aa16.26■□□□□ 0.19
UBE4B-206ENST00000466379 PI16Q6UXB8 463 aa16.26■□□□□ 0.19
UBE4B-206ENST00000466379 HELBQ8NG08 1087 aaPredicted RBP16.26■□□□□ 0.19
UBE4B-206ENST00000466379 SEC31BQ9NQW1 1179 aa16.26■□□□□ 0.19
UBE4B-206ENST00000466379 CYP46A1Q9Y6A2 500 aa16.26■□□□□ 0.19
UBE4B-206ENST00000466379 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
UBE4B-206ENST00000466379 BTAF1O14981 1849 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 DTNBO60941 627 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 NTSR2O95665 410 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 VGLL2Q8N8G2 317 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 TCEANC2Q96MN5 208 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 BCORQ6W2J9 1755 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
UBE4B-206ENST00000466379 RPAP1Q9BWH6 1393 aaPredicted RBP16.25■□□□□ 0.19
UBE4B-206ENST00000466379 ZAP70P43403 619 aa16.24■□□□□ 0.19
UBE4B-206ENST00000466379 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
UBE4B-206ENST00000466379 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
UBE4B-206ENST00000466379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBE4B-206ENST00000466379 INTS4Q96HW7 963 aaKnown RBP16.24■□□□□ 0.19
UBE4B-206ENST00000466379 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
UBE4B-206ENST00000466379 AFF2P51816 1311 aa16.24■□□□□ 0.19
UBE4B-206ENST00000466379 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
UBE4B-206ENST00000466379 LRP5O75197 1615 aa16.23■□□□□ 0.19
UBE4B-206ENST00000466379 RNF113AO15541 343 aaKnown RBP16.23■□□□□ 0.19
UBE4B-206ENST00000466379 PDE8BO95263 885 aa16.23■□□□□ 0.19
UBE4B-206ENST00000466379 ZMYM1Q5SVZ6 1142 aa16.23■□□□□ 0.19
UBE4B-206ENST00000466379 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
UBE4B-206ENST00000466379 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
UBE4B-206ENST00000466379 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
UBE4B-206ENST00000466379 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
UBE4B-206ENST00000466379 M0R2C6 588 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 SNAP23O00161 211 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 USPL1Q5W0Q7 1092 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 MCTP1Q6DN14 999 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 HELLSQ9NRZ9 838 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 MAST3O60307 1309 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 NHSQ6T4R5 1651 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 CLEC17AQ6ZS10 378 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 AK7Q96M32 723 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 ZNF652Q9Y2D9 606 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 COL4A1P02462 1669 aa16.22■□□□□ 0.19
UBE4B-206ENST00000466379 PSMA5P28066 241 aa16.21■□□□□ 0.19
UBE4B-206ENST00000466379 MCAMP43121 646 aa16.21■□□□□ 0.19
UBE4B-206ENST00000466379 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.19
UBE4B-206ENST00000466379 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
UBE4B-206ENST00000466379 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
UBE4B-206ENST00000466379 CCDC83Q8IWF9 413 aa16.21■□□□□ 0.19
UBE4B-206ENST00000466379 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
UBE4B-206ENST00000466379 SRP68Q9UHB9 627 aaKnown RBP16.21■□□□□ 0.19
UBE4B-206ENST00000466379 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
UBE4B-206ENST00000466379 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 CYP21A2P08686 494 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 PHKA1P46020 1223 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 OSBP2Q969R2 916 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 CCNL1Q9UK58 526 aaPredicted RBP16.2■□□□□ 0.18
UBE4B-206ENST00000466379 TPCN1Q9ULQ1 816 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 LAMB2P55268 1798 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 C3orf67Q6ZVT6 689 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
UBE4B-206ENST00000466379 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms