RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 AKAP2Q9Y2D5 859 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 PHLPP1O60346 1717 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 TIAM2Q8IVF5 1701 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 NWD2Q9ULI1 1742 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 PITPNM1O00562 1244 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 EVCP57679 992 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 FOXO4P98177 505 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 AIMP1Q12904 312 aaKnown RBP8.13□□□□□ -1.11
CDHR3-204ENST00000466351 SLC39A6Q13433 755 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 ME3Q16798 604 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 ADCK5Q3MIX3 580 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 HSP90AB3PQ58FF7 597 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 NAA16Q6N069 864 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-204ENST00000466351 RBM43Q6ZSC3 357 aaKnown RBP8.13□□□□□ -1.11
CDHR3-204ENST00000466351 UBE3BQ7Z3V4 1068 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 GTF3C6Q969F1 213 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 ZNF512BQ96KM6 892 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-204ENST00000466351 AK7Q96M32 723 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 FAM227BQ96M60 508 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 FUCA2Q9BTY2 467 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 ISCA1Q9BUE6 129 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 USP16Q9Y5T5 823 aa8.13□□□□□ -1.11
CDHR3-204ENST00000466351 ZMYM6O95789 1325 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 EYA2O00167 538 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 MAP4K4O95819 1239 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-204ENST00000466351 PCCAP05165 728 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-204ENST00000466351 CCDC192P0DO97 292 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 MYL6BP14649 208 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 ST3GAL1Q11201 340 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 TOB2Q14106 344 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-204ENST00000466351 EPHA10Q5JZY3 1008 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 ZMYM1Q5SVZ6 1142 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 ATG9AQ7Z3C6 839 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 CCDC83Q8IWF9 413 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 SMARCC2Q8TAQ2 1214 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 RBM33Q96EV2 1170 aaKnown RBP8.12□□□□□ -1.11
CDHR3-204ENST00000466351 NEK1Q96PY6 1258 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 CCDC8Q9H0W5 538 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-204ENST00000466351 BOLA2Q9H3K6 86 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 PRDM11Q9NQV5 511 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
CDHR3-204ENST00000466351 CTNNA3Q9UI47 895 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 BCORQ6W2J9 1755 aa8.12□□□□□ -1.11
CDHR3-204ENST00000466351 RGL2O15211 777 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 CTAGE5O15320 804 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 LARGE1O95461 756 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 TFCP2Q12800 502 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 LARP1BQ659C4 914 aaKnown RBP8.11□□□□□ -1.11
CDHR3-204ENST00000466351 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
CDHR3-204ENST00000466351 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-204ENST00000466351 PAG1Q9NWQ8 432 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
CDHR3-204ENST00000466351 CFAP45Q9UL16 551 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 TPCN1Q9ULQ1 816 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 C4AP0C0L4 1744 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 C4BP0C0L5 1744 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 NRAPQ86VF7 1730 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 DOT1LQ8TEK3 1739 aa8.11□□□□□ -1.11
CDHR3-204ENST00000466351 A0A1B0GUL6 1792 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 SALL1Q9NSC2 1324 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 GOLGA6L6A8MZA4 724 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 NBPF26B4DH59 902 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 PFKFB2O60825 505 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 TCIRG1Q13488 830 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
CDHR3-204ENST00000466351 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-204ENST00000466351 LMBR1LQ6UX01 489 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 MTERF4Q7Z6M4 381 aaKnown RBP8.1□□□□□ -1.11
CDHR3-204ENST00000466351 ZNF589Q86UQ0 364 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-204ENST00000466351 NBPF15Q8N660 670 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 ARXQ96QS3 562 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 SIL1Q9H173 461 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 NSFL1CQ9UNZ2 370 aaKnown RBP8.1□□□□□ -1.11
CDHR3-204ENST00000466351 CNPY2Q9Y2B0 182 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 BCL9O00512 1426 aa8.1□□□□□ -1.11
CDHR3-204ENST00000466351 COL16A1Q07092 1604 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-204ENST00000466351 COL5A3P25940 1745 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 KIAA1551Q9HCM1 1747 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 RRP9O43818 475 aaKnown RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 DHX16O60231 1041 aaKnown RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 CSF1RP07333 972 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 CYP21A2P08686 494 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 HSP90B1P14625 803 aaKnown RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 EXOSC10Q01780 885 aaKnown RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 DHX8Q14562 1220 aaKnown RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 TTF1Q15361 905 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 MAP3K11Q16584 847 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 ZSCAN25Q6NSZ9 544 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 TOM1L2Q6ZVM7 507 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 ZBTB38Q8NAP3 1195 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 FAM200AQ8TCP9 573 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 MAP7D2Q96T17 732 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 DBNDD2Q9BQY9 259 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 MTA3Q9BTC8 594 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 CDCA7Q9BWT1 371 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-204ENST00000466351 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
CDHR3-204ENST00000466351 RIC1Q4ADV7 1423 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms