RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ST5P78524 1137 aa22.72■■□□□ 1.23
CAPN3-209ENST00000466222 PI4K2BQ8TCG2 481 aa22.72■■□□□ 1.23
CAPN3-209ENST00000466222 NEUROD6Q96NK8 337 aa22.72■■□□□ 1.23
CAPN3-209ENST00000466222 DBNDD2Q9BQY9 259 aa22.72■■□□□ 1.23
CAPN3-209ENST00000466222 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
CAPN3-209ENST00000466222 TUBGCP6Q96RT7 1819 aa22.72■■□□□ 1.23
CAPN3-209ENST00000466222 RTL9Q8NET4 1388 aa22.72■■□□□ 1.23
CAPN3-209ENST00000466222 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
CAPN3-209ENST00000466222 TAF5LO75529 589 aa22.71■■□□□ 1.23
CAPN3-209ENST00000466222 FBXO3Q9UK99 471 aa22.71■■□□□ 1.23
CAPN3-209ENST00000466222 PARP3Q9Y6F1 533 aa22.71■■□□□ 1.23
CAPN3-209ENST00000466222 RIC1Q4ADV7 1423 aa22.71■■□□□ 1.23
CAPN3-209ENST00000466222 SDSP20132 328 aa22.7■■□□□ 1.23
CAPN3-209ENST00000466222 IGHMBP2P38935 993 aaKnown RBP22.7■■□□□ 1.23
CAPN3-209ENST00000466222 VGLL2Q8N8G2 317 aa22.7■■□□□ 1.23
CAPN3-209ENST00000466222 A0A1B0GUL7 405 aa22.7■■□□□ 1.22
CAPN3-209ENST00000466222 CDC5LQ99459 802 aaKnown RBP22.7■■□□□ 1.22
CAPN3-209ENST00000466222 ADORA1P30542 326 aa22.69■■□□□ 1.22
CAPN3-209ENST00000466222 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
CAPN3-209ENST00000466222 FRAT2O75474 233 aaPredicted RBP22.69■■□□□ 1.22
CAPN3-209ENST00000466222 ECHDC1Q9NTX5 307 aa22.69■■□□□ 1.22
CAPN3-209ENST00000466222 RPS8P62241 208 aaKnown RBP22.68■■□□□ 1.22
CAPN3-209ENST00000466222 DDX46Q7L014 1031 aaKnown RBP22.68■■□□□ 1.22
CAPN3-209ENST00000466222 PDE8BO95263 885 aa22.67■■□□□ 1.22
CAPN3-209ENST00000466222 CRY2Q49AN0 593 aa22.67■■□□□ 1.22
CAPN3-209ENST00000466222 ILDR2Q71H61 639 aa22.67■■□□□ 1.22
CAPN3-209ENST00000466222 NDUFB9Q9Y6M9 179 aa22.67■■□□□ 1.22
CAPN3-209ENST00000466222 TNRC6CQ9HCJ0 1690 aaKnown RBP22.67■■□□□ 1.22
CAPN3-209ENST00000466222 CHRNDQ07001 517 aa22.67■■□□□ 1.22
CAPN3-209ENST00000466222 R3HDM1Q15032 1099 aaKnown RBP22.67■■□□□ 1.22
CAPN3-209ENST00000466222 GPR108Q9NPR9 543 aa22.67■■□□□ 1.22
CAPN3-209ENST00000466222 BOLA2Q9H3K6 86 aa22.66■■□□□ 1.22
CAPN3-209ENST00000466222 BSDC1Q9NW68 430 aaPredicted RBP22.66■■□□□ 1.22
CAPN3-209ENST00000466222 TRIM6-TRIM34B2RNG4 842 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 ZBTB7AO95365 584 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 RILPL2Q969X0 211 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 ANTXR1Q9H6X2 564 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 MINPP1Q9UNW1 487 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 ATP2B3Q16720 1220 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 RPGRQ92834 1020 aaKnown RBP22.65■■□□□ 1.22
CAPN3-209ENST00000466222 XAGE2Q96GT9 111 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 BRIP1Q9BX63 1249 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 TBC1D2Q9BYX2 928 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 C22orf23Q9BZE7 217 aa22.65■■□□□ 1.22
CAPN3-209ENST00000466222 TTC41PQ6P2S7 1318 aa22.64■■□□□ 1.22
CAPN3-209ENST00000466222 MROH5Q6ZUA9 1318 aa22.64■■□□□ 1.22
CAPN3-209ENST00000466222 ZNF609O15014 1411 aa22.64■■□□□ 1.22
CAPN3-209ENST00000466222 KLRG2A4D1S0 409 aaPredicted RBP22.64■■□□□ 1.21
CAPN3-209ENST00000466222 EDC3Q96F86 508 aaKnown RBP22.63■■□□□ 1.21
CAPN3-209ENST00000466222 AKAP2Q9Y2D5 859 aa22.63■■□□□ 1.21
CAPN3-209ENST00000466222 AOX1Q06278 1338 aa22.63■■□□□ 1.21
CAPN3-209ENST00000466222 GLRX3O76003 335 aaKnown RBP22.63■■□□□ 1.21
CAPN3-209ENST00000466222 GRAPQ13588 217 aa22.63■■□□□ 1.21
CAPN3-209ENST00000466222 GRAPLQ8TC17 118 aaPredicted RBP22.63■■□□□ 1.21
CAPN3-209ENST00000466222 GPATCH3Q96I76 525 aa22.63■■□□□ 1.21
CAPN3-209ENST00000466222 LRP5O75197 1615 aa22.62■■□□□ 1.21
CAPN3-209ENST00000466222 PSDA5PKW4 1024 aaPredicted RBP22.62■■□□□ 1.21
CAPN3-209ENST00000466222 FGFR2P21802 821 aa22.62■■□□□ 1.21
CAPN3-209ENST00000466222 TBC1D9Q6ZT07 1266 aa22.62■■□□□ 1.21
CAPN3-209ENST00000466222 ERC2O15083 957 aa22.61■■□□□ 1.21
CAPN3-209ENST00000466222 ATF5Q9Y2D1 282 aaPredicted RBP22.61■■□□□ 1.21
CAPN3-209ENST00000466222 PUM3Q15397 648 aaKnown RBP22.61■■□□□ 1.21
CAPN3-209ENST00000466222 LAMB2P55268 1798 aa22.6■■□□□ 1.21
CAPN3-209ENST00000466222 SRGNP10124 158 aa22.6■■□□□ 1.21
CAPN3-209ENST00000466222 ATP5JP18859 108 aa22.59■■□□□ 1.21
CAPN3-209ENST00000466222 GORABQ5T7V8 394 aa22.59■■□□□ 1.21
CAPN3-209ENST00000466222 RBM17Q96I25 401 aaKnown RBP22.59■■□□□ 1.21
CAPN3-209ENST00000466222 MYH3P11055 1940 aa22.59■■□□□ 1.21
CAPN3-209ENST00000466222 HOXA10P31260 410 aaPredicted RBP22.59■■□□□ 1.21
CAPN3-209ENST00000466222 SCARF1Q14162 830 aa22.59■■□□□ 1.21
CAPN3-209ENST00000466222 LPIN2Q92539 896 aa22.59■■□□□ 1.21
CAPN3-209ENST00000466222 MFAP1P55081 439 aaKnown RBP22.58■■□□□ 1.21
CAPN3-209ENST00000466222 DNAJC2Q99543 621 aaKnown RBP22.58■■□□□ 1.21
CAPN3-209ENST00000466222 CDC45O75419 566 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 KLRK1P26718 216 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 CHRNA5P30532 468 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 PDE6BP35913 854 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 PI16Q6UXB8 463 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 SLC16A10Q8TF71 515 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 SLKQ9H2G2 1235 aaPredicted RBP22.57■■□□□ 1.2
CAPN3-209ENST00000466222 EIF5BO60841 1220 aaKnown RBP22.57■■□□□ 1.2
CAPN3-209ENST00000466222 PHKA1P46020 1223 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 OLFM4Q6UX06 510 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 SNRKQ9NRH2 765 aa22.57■■□□□ 1.2
CAPN3-209ENST00000466222 TAF1P21675 1872 aa22.56■■□□□ 1.2
CAPN3-209ENST00000466222 RBM25P49756 843 aaKnown RBP22.56■■□□□ 1.2
CAPN3-209ENST00000466222 BCAMP50895 628 aa22.55■■□□□ 1.2
CAPN3-209ENST00000466222 CCDC158Q5M9N0 1113 aa22.55■■□□□ 1.2
CAPN3-209ENST00000466222 TTC39AQ5SRH9 613 aa22.55■■□□□ 1.2
CAPN3-209ENST00000466222 CCDC102BQ68D86 513 aa22.55■■□□□ 1.2
CAPN3-209ENST00000466222 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
CAPN3-209ENST00000466222 CHGBP05060 677 aa22.55■■□□□ 1.2
CAPN3-209ENST00000466222 ZNF622Q969S3 477 aaKnown RBP eCLIP22.55■■□□□ 1.2
CAPN3-209ENST00000466222 CRAMP1Q96RY5 1269 aa22.55■■□□□ 1.2
CAPN3-209ENST00000466222 IFIT1P09914 478 aaKnown RBP22.54■■□□□ 1.2
CAPN3-209ENST00000466222 SLC5A1P13866 664 aa22.54■■□□□ 1.2
CAPN3-209ENST00000466222 NPR1P16066 1061 aa22.54■■□□□ 1.2
CAPN3-209ENST00000466222 CNTROBQ8N137 903 aa22.54■■□□□ 1.2
CAPN3-209ENST00000466222 HAUS7Q99871 368 aa22.54■■□□□ 1.2
CAPN3-209ENST00000466222 UTRNP46939 3433 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms