RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 STK32BQ9NY57 414 aa8.72□□□□□ -1.01
TPM3-214ENST00000466010 CXXC1Q9P0U4 656 aaPredicted RBP8.72□□□□□ -1.01
TPM3-214ENST00000466010 HSPA5P11021 654 aaKnown RBP8.71□□□□□ -1.02
TPM3-214ENST00000466010 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
TPM3-214ENST00000466010 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
TPM3-214ENST00000466010 NBPF6Q5VWK0 638 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 DZIP3Q86Y13 1208 aaKnown RBP8.71□□□□□ -1.02
TPM3-214ENST00000466010 ZSCAN29Q8IWY8 852 aaPredicted RBP8.71□□□□□ -1.02
TPM3-214ENST00000466010 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 DDX54Q8TDD1 881 aaKnown RBP8.71□□□□□ -1.02
TPM3-214ENST00000466010 NBPF4Q96M43 638 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 EVA1BQ9NVM1 165 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 PCDHB3Q9Y5E6 796 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 WASHC2AQ641Q2 1341 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 PCDH11XQ9BZA7 1347 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 PCDH11YQ9BZA8 1340 aa8.71□□□□□ -1.02
TPM3-214ENST00000466010 MAPK1P28482 360 aa8.7□□□□□ -1.02
TPM3-214ENST00000466010 GTF2IP78347 998 aa8.7□□□□□ -1.02
TPM3-214ENST00000466010 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
TPM3-214ENST00000466010 HSP90AB2PQ58FF8 381 aa8.7□□□□□ -1.02
TPM3-214ENST00000466010 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
TPM3-214ENST00000466010 TAS1R3Q7RTX0 852 aa8.7□□□□□ -1.02
TPM3-214ENST00000466010 POLR3GLQ9BT43 218 aa8.7□□□□□ -1.02
TPM3-214ENST00000466010 PPM1GO15355 546 aaPredicted RBP8.69□□□□□ -1.02
TPM3-214ENST00000466010 KCNQ2O43526 872 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 ICMTO60725 284 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 PPP4CP60510 307 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 CCDC102BQ68D86 513 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 THAP11Q96EK4 314 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 ACSBG1Q96GR2 724 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 PPP1R1BQ9UD71 204 aaPredicted RBP8.69□□□□□ -1.02
TPM3-214ENST00000466010 SPG7Q9UQ90 795 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 KNSTRNQ9Y448 316 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 MEGF6O75095 1541 aa8.69□□□□□ -1.02
TPM3-214ENST00000466010 ANKRD26Q9UPS8 1709 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 BHMG1C9JSJ3 638 aaPredicted RBP8.68□□□□□ -1.02
TPM3-214ENST00000466010 C21orf2O43822 256 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 FBLN1P23142 703 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 ZNF211Q13398 564 aaPredicted RBP8.68□□□□□ -1.02
TPM3-214ENST00000466010 VARS2Q5ST30 1063 aaKnown RBP8.68□□□□□ -1.02
TPM3-214ENST00000466010 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
TPM3-214ENST00000466010 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 PANK3Q9H999 370 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 NCAPD2Q15021 1401 aa8.68□□□□□ -1.02
TPM3-214ENST00000466010 TK2O00142 265 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 DXOO77932 396 aaKnown RBP8.67□□□□□ -1.02
TPM3-214ENST00000466010 COL19A1Q14993 1142 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 OCLNQ16625 522 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 ANKK1Q8NFD2 765 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 PRIMPOLQ96LW4 560 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 MTFR1LQ9H019 292 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 POLKQ9UBT6 870 aa8.67□□□□□ -1.02
TPM3-214ENST00000466010 SCNN1AP37088 669 aa8.66□□□□□ -1.02
TPM3-214ENST00000466010 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
TPM3-214ENST00000466010 MORC1Q86VD1 984 aa8.66□□□□□ -1.02
TPM3-214ENST00000466010 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
TPM3-214ENST00000466010 SMARCC1Q92922 1105 aaPredicted RBP8.66□□□□□ -1.02
TPM3-214ENST00000466010 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
TPM3-214ENST00000466010 BTAF1O14981 1849 aa8.66□□□□□ -1.02
TPM3-214ENST00000466010 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.02
TPM3-214ENST00000466010 ZBTB7BO15156 539 aaPredicted RBP8.65□□□□□ -1.02
TPM3-214ENST00000466010 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.02
TPM3-214ENST00000466010 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.02
TPM3-214ENST00000466010 SREK1Q8WXA9 508 aaKnown RBP8.65□□□□□ -1.02
TPM3-214ENST00000466010 DRC1Q96MC2 740 aa8.65□□□□□ -1.02
TPM3-214ENST00000466010 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
TPM3-214ENST00000466010 ANO2Q9NQ90 1003 aa8.65□□□□□ -1.02
TPM3-214ENST00000466010 POTEB2H3BUK9 544 aa8.64□□□□□ -1.03
TPM3-214ENST00000466010 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
TPM3-214ENST00000466010 DKK1O94907 266 aa8.64□□□□□ -1.03
TPM3-214ENST00000466010 MMP16P51512 607 aa8.64□□□□□ -1.03
TPM3-214ENST00000466010 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
TPM3-214ENST00000466010 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
TPM3-214ENST00000466010 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
TPM3-214ENST00000466010 GTF3C2Q8WUA4 911 aaPredicted RBP8.64□□□□□ -1.03
TPM3-214ENST00000466010 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
TPM3-214ENST00000466010 CCNL1Q9UK58 526 aaPredicted RBP8.64□□□□□ -1.03
TPM3-214ENST00000466010 HPS5Q9UPZ3 1129 aa8.64□□□□□ -1.03
TPM3-214ENST00000466010 PAPPAQ13219 1627 aa8.64□□□□□ -1.03
TPM3-214ENST00000466010 CASZ1Q86V15 1759 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 DOT1LQ8TEK3 1739 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 KIF7Q2M1P5 1343 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 IGSF1Q8N6C5 1336 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 SFI1A8K8P3 1242 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 CYP27B1O15528 508 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 TNNT2P45379 298 aaPredicted RBP8.63□□□□□ -1.03
TPM3-214ENST00000466010 APLP1P51693 650 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 USP4Q13107 963 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 EIF4A2Q14240 407 aaKnown RBP8.63□□□□□ -1.03
TPM3-214ENST00000466010 AMOTQ4VCS5 1084 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 EAPPQ56P03 285 aaPredicted RBP8.63□□□□□ -1.03
TPM3-214ENST00000466010 SH3BP5LQ7L8J4 393 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 IFNL2Q8IZJ0 200 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms