RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 FGD5Q6ZNL6 1462 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 GPR182O15218 404 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 GAS6Q14393 721 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 PNMA5Q96PV4 448 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 FAM129BQ96TA1 746 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 TMEM63CQ9P1W3 806 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 ZFATQ9P243 1243 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
CACNA1C-223ENST00000465278 EGFRP00533 1210 aa8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 IGHA2P01877 340 aa8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 BMP4P12644 408 aa8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 MX2P20592 715 aa8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 RNFT1Q5M7Z0 435 aa8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 TTC39BQ5VTQ0 682 aaPredicted RBP8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 NLRP13Q86W25 1043 aa8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 CNTN3Q9P232 1028 aa8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 SETD1BQ9UPS6 1966 aaKnown RBP8.4□□□□□ -1.06
CACNA1C-223ENST00000465278 TREHO43280 583 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 NFKB1P19838 968 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 MAPK8P45983 427 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 EHHADHQ08426 723 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 ORC1Q13415 861 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 DSC3Q14574 896 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 DMRTB1Q96MA1 342 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 KIAA0556O60303 1618 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 MAGI3Q5TCQ9 1506 aa8.39□□□□□ -1.07
CACNA1C-223ENST00000465278 MMP20O60882 483 aa8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 RARAP10276 462 aa8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 PCBP4P57723 403 aaKnown RBP8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 PDE12Q6L8Q7 609 aaKnown RBP8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 NPAS4Q8IUM7 802 aa8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 C1orf127Q8N9H9 656 aa8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 WWC3Q9ULE0 1092 aa8.38□□□□□ -1.07
CACNA1C-223ENST00000465278 LRP5O75197 1615 aa8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 CYP2E1P05181 493 aaPredicted RBP8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 FAM182BQ5T319 152 aa8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 IRF7Q92985 503 aa8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 ZNF775Q96BV0 537 aaPredicted RBP8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 CNTNAP3BQ96NU0 1288 aa8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 CNTNAP3Q9BZ76 1288 aa8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 C11orf16Q9NQ32 467 aa8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 ARAP3Q8WWN8 1544 aa8.37□□□□□ -1.07
CACNA1C-223ENST00000465278 POLR3DP05423 398 aaPredicted RBP8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 P4HBP07237 508 aaKnown RBP8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 ERCC3P19447 782 aa8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 TBC1D8BQ0IIM8 1120 aa8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 USPL1Q5W0Q7 1092 aa8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 SETDB2Q96T68 719 aa8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 ABI2Q9NYB9 513 aaPredicted RBP8.36□□□□□ -1.07
CACNA1C-223ENST00000465278 SETBP1Q9Y6X0 1596 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 SIGLEC1Q9BZZ2 1709 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 PHACTR2O75167 634 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 ZNF428Q96B54 188 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 BCL2L13Q9BXK5 485 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 ZFYVE28Q9HCC9 887 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 KLF15Q9UIH9 416 aa8.35□□□□□ -1.07
CACNA1C-223ENST00000465278 TOP2AP11388 1531 aaKnown RBP8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 ARHGEF40Q8TER5 1519 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 ALKQ9UM73 1620 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 EIF1AYO14602 144 aaKnown RBP8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 EREGO14944 169 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 VSIG8P0DPA2 414 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 CES1P23141 567 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 KRT76Q01546 638 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 MLLT1Q03111 559 aaPredicted RBP8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 EAPPQ56P03 285 aaPredicted RBP8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 HFE2Q6ZVN8 426 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 ALKBH8Q96BT7 664 aaKnown RBP8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 CSRNP1Q96S65 589 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 IGF1RP08069 1367 aa8.34□□□□□ -1.07
CACNA1C-223ENST00000465278 PNMA6FA0A0J9YX94 578 aa8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 NEFLP07196 543 aa8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 PSAPP07602 524 aa8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 KANSL3Q9P2N6 904 aa8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 NSFL1CQ9UNZ2 370 aaKnown RBP8.33□□□□□ -1.08
CACNA1C-223ENST00000465278 ZCCHC11Q5TAX3 1644 aaKnown RBP8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 NEURL1BA8MQ27 555 aa8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 J3QW42 95 aa8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 CPNE3O75131 537 aaKnown RBP8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 WFS1O76024 890 aa8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 GMPRP36959 345 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms