RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 COL4A1P02462 1669 aa20.07■□□□□ 0.8
NCSTN-210ENST00000465223 GPSM2P81274 684 aa20.07■□□□□ 0.8
NCSTN-210ENST00000465223 TTLL12Q14166 644 aaPredicted RBP20.07■□□□□ 0.8
NCSTN-210ENST00000465223 ZNF428Q96B54 188 aa20.07■□□□□ 0.8
NCSTN-210ENST00000465223 EIF4A1P60842 406 aaKnown RBP20.06■□□□□ 0.8
NCSTN-210ENST00000465223 SREBF2Q12772 1141 aa20.06■□□□□ 0.8
NCSTN-210ENST00000465223 TMC4Q7Z404 712 aa20.06■□□□□ 0.8
NCSTN-210ENST00000465223 CELF1Q92879 486 aaKnown RBP20.06■□□□□ 0.8
NCSTN-210ENST00000465223 ZNF280AP59817 542 aaPredicted RBP20.05■□□□□ 0.8
NCSTN-210ENST00000465223 HTTP42858 3142 aa20.04■□□□□ 0.8
NCSTN-210ENST00000465223 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
NCSTN-210ENST00000465223 LRP10Q7Z4F1 713 aa20.04■□□□□ 0.8
NCSTN-210ENST00000465223 NLRP10Q86W26 655 aa20.04■□□□□ 0.8
NCSTN-210ENST00000465223 OTUD5Q96G74 571 aa20.04■□□□□ 0.8
NCSTN-210ENST00000465223 TRIOBPQ9H2D6 2365 aa20.03■□□□□ 0.8
NCSTN-210ENST00000465223 EYA3Q99504 573 aa20.03■□□□□ 0.8
NCSTN-210ENST00000465223 TRMT112Q9UI30 125 aaKnown RBP20.03■□□□□ 0.8
NCSTN-210ENST00000465223 TIMELESSQ9UNS1 1208 aa20.03■□□□□ 0.8
NCSTN-210ENST00000465223 PTPN22Q9Y2R2 807 aa20.03■□□□□ 0.8
NCSTN-210ENST00000465223 PITPNM2Q9BZ72 1349 aa20.02■□□□□ 0.8
NCSTN-210ENST00000465223 H0YGN5 161 aa20.02■□□□□ 0.8
NCSTN-210ENST00000465223 ANXA1P04083 346 aa20.02■□□□□ 0.8
NCSTN-210ENST00000465223 TBC1D16Q8TBP0 767 aa20.02■□□□□ 0.8
NCSTN-210ENST00000465223 MYOZ2Q9NPC6 264 aa20.02■□□□□ 0.8
NCSTN-210ENST00000465223 DLG5Q8TDM6 1919 aa20.02■□□□□ 0.79
NCSTN-210ENST00000465223 PSME4Q14997 1843 aa20.02■□□□□ 0.79
NCSTN-210ENST00000465223 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.79
NCSTN-210ENST00000465223 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
NCSTN-210ENST00000465223 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
NCSTN-210ENST00000465223 PTPN12Q05209 780 aaKnown RBP20.01■□□□□ 0.79
NCSTN-210ENST00000465223 PROSER3Q2NL68 480 aa20.01■□□□□ 0.79
NCSTN-210ENST00000465223 RSBN1LQ6PCB5 846 aaPredicted RBP20.01■□□□□ 0.79
NCSTN-210ENST00000465223 ARMC5Q96C12 935 aa20.01■□□□□ 0.79
NCSTN-210ENST00000465223 SZT2Q5T011 3432 aa20.01■□□□□ 0.79
NCSTN-210ENST00000465223 PRKG1Q13976 671 aa20■□□□□ 0.79
NCSTN-210ENST00000465223 PDIA6Q15084 440 aa20■□□□□ 0.79
NCSTN-210ENST00000465223 CD99L2Q8TCZ2 262 aa20■□□□□ 0.79
NCSTN-210ENST00000465223 PNISRQ8TF01 805 aaKnown RBP20■□□□□ 0.79
NCSTN-210ENST00000465223 ZC3H12CQ9C0D7 883 aaKnown RBP20■□□□□ 0.79
NCSTN-210ENST00000465223 ERBB4Q15303 1308 aa20■□□□□ 0.79
NCSTN-210ENST00000465223 CHRDL2Q6WN34 429 aa19.99■□□□□ 0.79
NCSTN-210ENST00000465223 AGBL3Q8NEM8 1001 aa19.99■□□□□ 0.79
NCSTN-210ENST00000465223 G3V3G9 751 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 ALDH1A1P00352 501 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 USP17L8P0C7I0 530 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 TCIRG1Q13488 830 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 NBPF9Q3BBW0 867 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 DCAF8Q5TAQ9 597 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 SPRYD7Q5W111 196 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 GMLQ99445 158 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.98■□□□□ 0.79
NCSTN-210ENST00000465223 ZNF609O15014 1411 aa19.98■□□□□ 0.79
NCSTN-210ENST00000465223 CENPFP49454 3210 aa19.97■□□□□ 0.79
NCSTN-210ENST00000465223 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
NCSTN-210ENST00000465223 CAP1Q01518 475 aa19.97■□□□□ 0.79
NCSTN-210ENST00000465223 HSP90AB3PQ58FF7 597 aa19.97■□□□□ 0.79
NCSTN-210ENST00000465223 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
NCSTN-210ENST00000465223 IFNL1Q8IU54 200 aa19.97■□□□□ 0.79
NCSTN-210ENST00000465223 TMEM106CQ9BVX2 250 aa19.97■□□□□ 0.79
NCSTN-210ENST00000465223 NF2P35240 595 aa19.96■□□□□ 0.79
NCSTN-210ENST00000465223 AIMP1Q12904 312 aaKnown RBP19.96■□□□□ 0.79
NCSTN-210ENST00000465223 ERO1AQ96HE7 468 aa19.96■□□□□ 0.79
NCSTN-210ENST00000465223 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
NCSTN-210ENST00000465223 RBM27Q9P2N5 1060 aaKnown RBP19.96■□□□□ 0.79
NCSTN-210ENST00000465223 FZD1Q9UP38 647 aa19.96■□□□□ 0.79
NCSTN-210ENST00000465223 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
NCSTN-210ENST00000465223 BRCA2P51587 3418 aa19.95■□□□□ 0.78
NCSTN-210ENST00000465223 IGF2BP3O00425 579 aaKnown RBP eCLIP19.95■□□□□ 0.78
NCSTN-210ENST00000465223 UFL1O94874 794 aa19.95■□□□□ 0.78
NCSTN-210ENST00000465223 COPS6Q7L5N1 327 aa19.95■□□□□ 0.78
NCSTN-210ENST00000465223 SF3B3Q15393 1217 aaKnown RBP19.94■□□□□ 0.78
NCSTN-210ENST00000465223 ARMC9Q7Z3E5 817 aa19.94■□□□□ 0.78
NCSTN-210ENST00000465223 ZNF333Q96JL9 665 aa19.94■□□□□ 0.78
NCSTN-210ENST00000465223 EFCC1Q9HA90 598 aa19.94■□□□□ 0.78
NCSTN-210ENST00000465223 MANSC4A6NHS7 340 aaPredicted RBP19.93■□□□□ 0.78
NCSTN-210ENST00000465223 LDLRAD1Q5T700 205 aa19.93■□□□□ 0.78
NCSTN-210ENST00000465223 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
NCSTN-210ENST00000465223 ANGEL1Q9UNK9 670 aaKnown RBP19.93■□□□□ 0.78
NCSTN-210ENST00000465223 CEP290O15078 2479 aa19.93■□□□□ 0.78
NCSTN-210ENST00000465223 MYCP01106 439 aaPredicted RBP19.92■□□□□ 0.78
NCSTN-210ENST00000465223 FAM89AQ96GI7 184 aa19.92■□□□□ 0.78
NCSTN-210ENST00000465223 WNT10BO00744 389 aa19.91■□□□□ 0.78
NCSTN-210ENST00000465223 RPS8P62241 208 aaKnown RBP19.91■□□□□ 0.78
NCSTN-210ENST00000465223 NECTIN2Q92692 538 aa19.91■□□□□ 0.78
NCSTN-210ENST00000465223 MXD3Q9BW11 206 aa19.91■□□□□ 0.78
NCSTN-210ENST00000465223 PODXL2Q9NZ53 605 aa19.91■□□□□ 0.78
NCSTN-210ENST00000465223 LAMB1P07942 1786 aa19.9■□□□□ 0.78
NCSTN-210ENST00000465223 INHBEP58166 350 aa19.9■□□□□ 0.78
NCSTN-210ENST00000465223 CRHR2Q13324 411 aa19.9■□□□□ 0.78
NCSTN-210ENST00000465223 SLC4A8Q2Y0W8 1093 aa19.9■□□□□ 0.78
NCSTN-210ENST00000465223 RTL5Q5HYW3 569 aaPredicted RBP19.9■□□□□ 0.78
NCSTN-210ENST00000465223 ANKIB1Q9P2G1 1089 aa19.9■□□□□ 0.78
NCSTN-210ENST00000465223 GGA1Q9UJY5 639 aa19.9■□□□□ 0.78
NCSTN-210ENST00000465223 USP17L3A6NCW0 530 aa19.89■□□□□ 0.77
NCSTN-210ENST00000465223 USP17L4A6NCW7 530 aa19.89■□□□□ 0.77
NCSTN-210ENST00000465223 USP17L1Q7RTZ2 530 aa19.89■□□□□ 0.77
NCSTN-210ENST00000465223 ZNF646O15015 1829 aaPredicted RBP19.88■□□□□ 0.77
NCSTN-210ENST00000465223 SASH1O94885 1247 aa19.88■□□□□ 0.77
NCSTN-210ENST00000465223 SP3Q02447 781 aa19.88■□□□□ 0.77
NCSTN-210ENST00000465223 SLC10A4Q96EP9 437 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms