RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 TSNAXIP1Q2TAA8 658 aa9.16□□□□□ -0.94
KPNA1-202ENST00000464940 RHPN1Q8TCX5 695 aa9.16□□□□□ -0.94
KPNA1-202ENST00000464940 ZCCHC2Q9C0B9 1178 aaKnown RBP9.16□□□□□ -0.94
KPNA1-202ENST00000464940 RTN1Q16799 776 aa9.15□□□□□ -0.94
KPNA1-202ENST00000464940 CAPN12Q6ZSI9 719 aa9.15□□□□□ -0.94
KPNA1-202ENST00000464940 HELQQ8TDG4 1101 aa9.15□□□□□ -0.94
KPNA1-202ENST00000464940 NEUROD4Q9HD90 331 aa9.15□□□□□ -0.94
KPNA1-202ENST00000464940 ANKIB1Q9P2G1 1089 aa9.15□□□□□ -0.94
KPNA1-202ENST00000464940 NAA30Q147X3 362 aaPredicted RBP9.14□□□□□ -0.95
KPNA1-202ENST00000464940 SAMD5Q5TGI4 173 aa9.14□□□□□ -0.95
KPNA1-202ENST00000464940 MYO19Q96H55 970 aa9.14□□□□□ -0.95
KPNA1-202ENST00000464940 NGLY1Q96IV0 654 aa9.14□□□□□ -0.95
KPNA1-202ENST00000464940 RBCK1Q9BYM8 510 aa9.14□□□□□ -0.95
KPNA1-202ENST00000464940 AVENQ9NQS1 362 aaPredicted RBP9.14□□□□□ -0.95
KPNA1-202ENST00000464940 GJA3Q9Y6H8 435 aa9.14□□□□□ -0.95
KPNA1-202ENST00000464940 MAPKBP1O60336 1514 aa9.14□□□□□ -0.95
KPNA1-202ENST00000464940 KIAA0586Q9BVV6 1533 aa9.14□□□□□ -0.95
KPNA1-202ENST00000464940 SPATA31C1P0DKV0 1188 aa9.13□□□□□ -0.95
KPNA1-202ENST00000464940 NPR3P17342 541 aa9.13□□□□□ -0.95
KPNA1-202ENST00000464940 HIF1AQ16665 826 aa9.13□□□□□ -0.95
KPNA1-202ENST00000464940 FAM182BQ5T319 152 aa9.13□□□□□ -0.95
KPNA1-202ENST00000464940 FAM177A1Q8N128 213 aaPredicted RBP9.13□□□□□ -0.95
KPNA1-202ENST00000464940 KLF15Q9UIH9 416 aa9.13□□□□□ -0.95
KPNA1-202ENST00000464940 ADCY10Q96PN6 1610 aa9.13□□□□□ -0.95
KPNA1-202ENST00000464940 ATXN7O15265 892 aaPredicted RBP9.12□□□□□ -0.95
KPNA1-202ENST00000464940 FGD1P98174 961 aa9.12□□□□□ -0.95
KPNA1-202ENST00000464940 NAALADL2Q58DX5 795 aa9.12□□□□□ -0.95
KPNA1-202ENST00000464940 LRRC69Q6ZNQ3 347 aa9.12□□□□□ -0.95
KPNA1-202ENST00000464940 FCHSD1Q86WN1 690 aa9.12□□□□□ -0.95
KPNA1-202ENST00000464940 TRIM11Q96F44 468 aa9.12□□□□□ -0.95
KPNA1-202ENST00000464940 PLVAPQ9BX97 442 aa9.12□□□□□ -0.95
KPNA1-202ENST00000464940 BACH2Q9BYV9 841 aa9.12□□□□□ -0.95
KPNA1-202ENST00000464940 QTRT2Q9H974 415 aaKnown RBP9.12□□□□□ -0.95
KPNA1-202ENST00000464940 NDUFB5O43674 189 aa9.11□□□□□ -0.95
KPNA1-202ENST00000464940 MAPTP10636 758 aaKnown RBP9.11□□□□□ -0.95
KPNA1-202ENST00000464940 SF3A1Q15459 793 aaKnown RBP9.11□□□□□ -0.95
KPNA1-202ENST00000464940 ZNF280CQ8ND82 737 aa9.11□□□□□ -0.95
KPNA1-202ENST00000464940 SUSD3Q96L08 255 aa9.11□□□□□ -0.95
KPNA1-202ENST00000464940 ABCC10Q5T3U5 1492 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 SCAMP3O14828 347 aaKnown RBP9.1□□□□□ -0.95
KPNA1-202ENST00000464940 P4HBP07237 508 aaKnown RBP9.1□□□□□ -0.95
KPNA1-202ENST00000464940 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
KPNA1-202ENST00000464940 TNP2Q05952 138 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 C11orf91Q3C1V1 193 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 COX20Q5RI15 118 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 TMC7Q7Z402 723 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 CITED4Q96RK1 184 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 DIP2BQ9P265 1576 aa9.1□□□□□ -0.95
KPNA1-202ENST00000464940 DCDC2BA2VCK2 349 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 FAM157BP0CG42 384 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 CD33P20138 364 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 ITGAEP38570 1179 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 MRPL58Q14197 206 aaKnown RBP9.09□□□□□ -0.95
KPNA1-202ENST00000464940 RSPO4Q2I0M5 234 aaPredicted RBP9.09□□□□□ -0.95
KPNA1-202ENST00000464940 UBXN4Q92575 508 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 PPP1R1BQ9UD71 204 aaPredicted RBP9.09□□□□□ -0.95
KPNA1-202ENST00000464940 HCN2Q9UL51 889 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 BRPF3Q9ULD4 1205 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 LRFN2Q9ULH4 789 aa9.09□□□□□ -0.95
KPNA1-202ENST00000464940 SCO2A0A1W2PP80 73 aa9.08□□□□□ -0.96
KPNA1-202ENST00000464940 DGKZQ13574 1117 aa9.08□□□□□ -0.96
KPNA1-202ENST00000464940 IER5Q5VY09 327 aa9.08□□□□□ -0.96
KPNA1-202ENST00000464940 C16orf46Q6P387 395 aa9.08□□□□□ -0.96
KPNA1-202ENST00000464940 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
KPNA1-202ENST00000464940 IQGAP2Q13576 1575 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 KHNYNO15037 678 aaKnown RBP9.07□□□□□ -0.96
KPNA1-202ENST00000464940 TREHO43280 583 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 EFSO43281 561 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 CANXP27824 592 aaKnown RBP9.07□□□□□ -0.96
KPNA1-202ENST00000464940 XPCQ01831 940 aaPredicted RBP9.07□□□□□ -0.96
KPNA1-202ENST00000464940 PLCB3Q01970 1234 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 LAMC2Q13753 1193 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 NKAPLQ5M9Q1 402 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 ZNF468Q5VIY5 522 aaPredicted RBP9.07□□□□□ -0.96
KPNA1-202ENST00000464940 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 TMC1Q8TDI8 760 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 HSH2DQ96JZ2 352 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 SAP130Q9H0E3 1048 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 KLK14Q9P0G3 267 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 DMGDHQ9UI17 866 aaKnown RBP9.07□□□□□ -0.96
KPNA1-202ENST00000464940 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
KPNA1-202ENST00000464940 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
KPNA1-202ENST00000464940 TGFBR3LH3BV60 316 aa9.06□□□□□ -0.96
KPNA1-202ENST00000464940 CDK11BP21127 795 aaKnown RBP9.06□□□□□ -0.96
KPNA1-202ENST00000464940 MPSTP25325 297 aa9.06□□□□□ -0.96
KPNA1-202ENST00000464940 PCBP4P57723 403 aaKnown RBP9.06□□□□□ -0.96
KPNA1-202ENST00000464940 FOXD4L6Q3SYB3 417 aaPredicted RBP9.06□□□□□ -0.96
KPNA1-202ENST00000464940 FOXD4L3Q6VB84 417 aaPredicted RBP9.06□□□□□ -0.96
KPNA1-202ENST00000464940 PRR12Q9ULL5 1215 aa9.06□□□□□ -0.96
KPNA1-202ENST00000464940 CDK11AQ9UQ88 783 aaPredicted RBP9.06□□□□□ -0.96
KPNA1-202ENST00000464940 BRD2P25440 801 aaKnown RBP9.05□□□□□ -0.96
KPNA1-202ENST00000464940 HDLBPQ00341 1268 aaKnown RBP9.05□□□□□ -0.96
KPNA1-202ENST00000464940 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.96
KPNA1-202ENST00000464940 AAMPQ13685 434 aa9.05□□□□□ -0.96
KPNA1-202ENST00000464940 BTLAQ7Z6A9 289 aa9.05□□□□□ -0.96
KPNA1-202ENST00000464940 IFT43Q96FT9 208 aa9.05□□□□□ -0.96
KPNA1-202ENST00000464940 DMRTB1Q96MA1 342 aa9.05□□□□□ -0.96
KPNA1-202ENST00000464940 CEP63Q96MT8 703 aa9.05□□□□□ -0.96
KPNA1-202ENST00000464940 MARK1Q9P0L2 795 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms