RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
SLC13A3-208ENST00000464518 EYA3Q99504 573 aa16.6■□□□□ 0.25
SLC13A3-208ENST00000464518 TRMT112Q9UI30 125 aaKnown RBP16.6■□□□□ 0.25
SLC13A3-208ENST00000464518 TSPYL4Q9UJ04 414 aa16.6■□□□□ 0.25
SLC13A3-208ENST00000464518 HCLS1P14317 486 aaPredicted RBP16.59■□□□□ 0.25
SLC13A3-208ENST00000464518 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
SLC13A3-208ENST00000464518 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
SLC13A3-208ENST00000464518 TRPA1O75762 1119 aa16.58■□□□□ 0.24
SLC13A3-208ENST00000464518 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
SLC13A3-208ENST00000464518 SF3B3Q15393 1217 aaKnown RBP16.58■□□□□ 0.24
SLC13A3-208ENST00000464518 MAPK8IP3Q9UPT6 1336 aa16.58■□□□□ 0.24
SLC13A3-208ENST00000464518 PAPPA2Q9BXP8 1791 aa16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 SOX10P56693 466 aa16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 KIF4BQ2VIQ3 1234 aa16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 TBC1D10BQ4KMP7 808 aaPredicted RBP16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 COPS6Q7L5N1 327 aa16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
SLC13A3-208ENST00000464518 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 RTL9Q8NET4 1388 aa16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 ADM5C9JUS6 153 aa16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 ECE2O60344 883 aa16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 EGFRP00533 1210 aa16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 DBNDD1Q9H9R9 158 aa16.56■□□□□ 0.24
SLC13A3-208ENST00000464518 PITPNM2Q9BZ72 1349 aa16.55■□□□□ 0.24
SLC13A3-208ENST00000464518 LMOD3Q0VAK6 560 aa16.55■□□□□ 0.24
SLC13A3-208ENST00000464518 PROSER3Q2NL68 480 aa16.55■□□□□ 0.24
SLC13A3-208ENST00000464518 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
SLC13A3-208ENST00000464518 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
SLC13A3-208ENST00000464518 PODXL2Q9NZ53 605 aa16.55■□□□□ 0.24
SLC13A3-208ENST00000464518 POLR2AP24928 1970 aaKnown RBP16.55■□□□□ 0.24
SLC13A3-208ENST00000464518 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 TAF1P21675 1872 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 C6orf229H3BNL8 230 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 RASAL3Q86YV0 1011 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 AGBL3Q8NEM8 1001 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 POLLQ9UGP5 575 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 PSME4Q14997 1843 aa16.54■□□□□ 0.24
SLC13A3-208ENST00000464518 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
SLC13A3-208ENST00000464518 ZNF280AP59817 542 aaPredicted RBP16.53■□□□□ 0.24
SLC13A3-208ENST00000464518 PLBD2Q8NHP8 589 aa16.53■□□□□ 0.24
SLC13A3-208ENST00000464518 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
SLC13A3-208ENST00000464518 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
SLC13A3-208ENST00000464518 ANXA1P04083 346 aa16.52■□□□□ 0.24
SLC13A3-208ENST00000464518 HOXB7P09629 217 aa16.52■□□□□ 0.24
SLC13A3-208ENST00000464518 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
SLC13A3-208ENST00000464518 DLK2Q6UY11 383 aa16.52■□□□□ 0.24
SLC13A3-208ENST00000464518 CDCA5Q96FF9 252 aa16.52■□□□□ 0.24
SLC13A3-208ENST00000464518 ZC3H12CQ9C0D7 883 aaKnown RBP16.52■□□□□ 0.24
SLC13A3-208ENST00000464518 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
SLC13A3-208ENST00000464518 GPSM2P81274 684 aa16.51■□□□□ 0.23
SLC13A3-208ENST00000464518 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
SLC13A3-208ENST00000464518 TBC1D16Q8TBP0 767 aa16.51■□□□□ 0.23
SLC13A3-208ENST00000464518 ISCA1Q9BUE6 129 aa16.51■□□□□ 0.23
SLC13A3-208ENST00000464518 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
SLC13A3-208ENST00000464518 SCN9AQ15858 1988 aa16.5■□□□□ 0.23
SLC13A3-208ENST00000464518 RBM26Q5T8P6 1007 aaKnown RBP16.5■□□□□ 0.23
SLC13A3-208ENST00000464518 HDAC9Q9UKV0 1011 aa16.5■□□□□ 0.23
SLC13A3-208ENST00000464518 RIPK4P57078 832 aa16.49■□□□□ 0.23
SLC13A3-208ENST00000464518 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
SLC13A3-208ENST00000464518 DOK7Q18PE1 504 aa16.49■□□□□ 0.23
SLC13A3-208ENST00000464518 RSBN1LQ6PCB5 846 aaPredicted RBP16.49■□□□□ 0.23
SLC13A3-208ENST00000464518 ANKRD13DQ6ZTN6 518 aa16.49■□□□□ 0.23
SLC13A3-208ENST00000464518 G3V3G9 751 aa16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 TM4SF4P48230 202 aa16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 MMP14P50281 582 aa16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 FBXO46Q6PJ61 603 aaPredicted RBP16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
SLC13A3-208ENST00000464518 SCARF1Q14162 830 aa16.47■□□□□ 0.23
SLC13A3-208ENST00000464518 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
SLC13A3-208ENST00000464518 ZNF296Q8WUU4 475 aaPredicted RBP16.47■□□□□ 0.23
SLC13A3-208ENST00000464518 GMLQ99445 158 aa16.47■□□□□ 0.23
SLC13A3-208ENST00000464518 MYOZ2Q9NPC6 264 aa16.47■□□□□ 0.23
SLC13A3-208ENST00000464518 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
SLC13A3-208ENST00000464518 CHL1O00533 1208 aa16.46■□□□□ 0.23
SLC13A3-208ENST00000464518 IRS4O14654 1257 aaPredicted RBP16.46■□□□□ 0.23
SLC13A3-208ENST00000464518 USP17L8P0C7I0 530 aa16.46■□□□□ 0.23
SLC13A3-208ENST00000464518 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
SLC13A3-208ENST00000464518 SREBF2Q12772 1141 aa16.46■□□□□ 0.23
SLC13A3-208ENST00000464518 CHPF2Q9P2E5 772 aa16.46■□□□□ 0.23
SLC13A3-208ENST00000464518 COL4A1P02462 1669 aa16.46■□□□□ 0.23
SLC13A3-208ENST00000464518 GPR25O00155 361 aa16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 UFL1O94874 794 aa16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 EVX2Q03828 476 aa16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 ZBTB38Q8NAP3 1195 aaPredicted RBP16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 HYPKQ9NX55 129 aa16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 ASTN2O75129 1339 aaPredicted RBP16.45■□□□□ 0.22
SLC13A3-208ENST00000464518 NF2P35240 595 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms