RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CREB3L3Q68CJ9 461 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 ZGPATQ8N5A5 531 aaKnown RBP26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 XAGE2Q96GT9 111 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 INTS4Q96HW7 963 aaKnown RBP26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 ZNF652Q9Y2D9 606 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 METTL24Q5JXM2 366 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 LINC00116Q8NCU8 138 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 CNNM1Q9NRU3 951 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 AKAP11Q9UKA4 1901 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 SCN7AQ01118 1682 aa26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 TAF1LQ8IZX4 1826 aa26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 LY75O60449 1722 aa26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 GOLIM4O00461 696 aa26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 HSP90B1P14625 803 aaKnown RBP26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 GORABQ5T7V8 394 aa26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 MEX3CQ5U5Q3 659 aaKnown RBP26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 RNF20Q5VTR2 975 aa26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 ZNF589Q86UQ0 364 aaPredicted RBP26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 CNTNAP4Q9C0A0 1308 aa26.08■■□□□ 1.77
PDLIM2-216ENST00000464275 ABCC12Q96J65 1359 aa26.08■■□□□ 1.76
PDLIM2-216ENST00000464275 TAF5LO75529 589 aa26.07■■□□□ 1.76
PDLIM2-216ENST00000464275 SSFA2P28290 1259 aa26.07■■□□□ 1.76
PDLIM2-216ENST00000464275 MCMDC2Q4G0Z9 681 aa26.07■■□□□ 1.76
PDLIM2-216ENST00000464275 TTC39AQ5SRH9 613 aa26.07■■□□□ 1.76
PDLIM2-216ENST00000464275 FAM43AQ8N2R8 423 aa26.07■■□□□ 1.76
PDLIM2-216ENST00000464275 CASTP20810 708 aaKnown RBP26.07■■□□□ 1.76
PDLIM2-216ENST00000464275 CLEC17AQ6ZS10 378 aa26.07■■□□□ 1.76
PDLIM2-216ENST00000464275 SLC27A2O14975 620 aa26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 CYP2E1P05181 493 aaPredicted RBP26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 ATP2B3Q16720 1220 aa26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 CLEC4GQ6UXB4 293 aa26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 NOL8Q76FK4 1167 aaKnown RBP26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 JAKMIP1Q96N16 626 aaKnown RBP26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 ZSWIM6Q9HCJ5 1215 aa26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 NIP7Q9Y221 180 aaKnown RBP eCLIP26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 ADORA1P30542 326 aa26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 HELLSQ9NRZ9 838 aa26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 HMG20BQ9P0W2 317 aa26.06■■□□□ 1.76
PDLIM2-216ENST00000464275 CYP46A1Q9Y6A2 500 aa26.05■■□□□ 1.76
PDLIM2-216ENST00000464275 RGL2O15211 777 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 NTSR2O95665 410 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 AK2P54819 239 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 VPS53Q5VIR6 699 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 USPL1Q5W0Q7 1092 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 GJD4Q96KN9 370 aaPredicted RBP26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 PSMA5P28066 241 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 ADCK5Q3MIX3 580 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 VGLL2Q8N8G2 317 aa26.04■■□□□ 1.76
PDLIM2-216ENST00000464275 FAM177BA6PVY3 158 aa26.03■■□□□ 1.76
PDLIM2-216ENST00000464275 HCLS1P14317 486 aaPredicted RBP26.03■■□□□ 1.76
PDLIM2-216ENST00000464275 LRRFIP1Q32MZ4 808 aaKnown RBP26.03■■□□□ 1.76
PDLIM2-216ENST00000464275 RC3H1Q5TC82 1133 aaKnown RBP26.03■■□□□ 1.76
PDLIM2-216ENST00000464275 LIMCH1Q9UPQ0 1083 aa26.03■■□□□ 1.76
PDLIM2-216ENST00000464275 RPAP1Q9BWH6 1393 aaPredicted RBP26.03■■□□□ 1.76
PDLIM2-216ENST00000464275 TSGA10IPQ3SY00 556 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 RUFY3Q7L099 469 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 PDRG1Q9NUG6 133 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 U3KPZ7 1027 aaPredicted RBP26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 MROH5Q6ZUA9 1318 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 RTL9Q8NET4 1388 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 LAMA4Q16363 1823 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 PDE8BO95263 885 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 HSPA1LP34931 641 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 ZMYM1Q5SVZ6 1142 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 AFF2P51816 1311 aa26.02■■□□□ 1.76
PDLIM2-216ENST00000464275 RNF113AO15541 343 aaKnown RBP26.01■■□□□ 1.75
PDLIM2-216ENST00000464275 MRE11P49959 708 aa26.01■■□□□ 1.75
PDLIM2-216ENST00000464275 PTF1AQ7RTS3 328 aa26.01■■□□□ 1.75
PDLIM2-216ENST00000464275 SEC62Q99442 399 aaKnown RBP26.01■■□□□ 1.75
PDLIM2-216ENST00000464275 ATRNO75882 1429 aa26■■□□□ 1.75
PDLIM2-216ENST00000464275 CCDC152Q4G0S7 254 aa26■■□□□ 1.75
PDLIM2-216ENST00000464275 ZNF512BQ96KM6 892 aaPredicted RBP26■■□□□ 1.75
PDLIM2-216ENST00000464275 CCDC129Q6ZRS4 1044 aa26■■□□□ 1.75
PDLIM2-216ENST00000464275 MYO5AQ9Y4I1 1855 aaKnown RBP26■■□□□ 1.75
PDLIM2-216ENST00000464275 GOLGA6L22H0YM25 854 aa25.99■■□□□ 1.75
PDLIM2-216ENST00000464275 CHGBP05060 677 aa25.99■■□□□ 1.75
PDLIM2-216ENST00000464275 CPA1P15085 419 aa25.99■■□□□ 1.75
PDLIM2-216ENST00000464275 FKBP4Q02790 459 aaKnown RBP eCLIP25.99■■□□□ 1.75
PDLIM2-216ENST00000464275 KRT32Q14532 448 aa25.98■■□□□ 1.75
PDLIM2-216ENST00000464275 ZSCAN31Q96LW9 406 aaPredicted RBP25.98■■□□□ 1.75
PDLIM2-216ENST00000464275 ONECUT3O60422 494 aaPredicted RBP25.98■■□□□ 1.75
PDLIM2-216ENST00000464275 BAG4O95429 457 aaKnown RBP25.98■■□□□ 1.75
PDLIM2-216ENST00000464275 A0A1B0GUL6 1792 aa25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 RPS6KA4O75676 772 aa25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 ZFYP08048 801 aaPredicted RBP25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 KCNQ4P56696 695 aa25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 PKP1Q13835 747 aa25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 RTN4Q9NQC3 1192 aaKnown RBP25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 TRPC5Q9UL62 973 aaPredicted RBP25.97■■□□□ 1.75
PDLIM2-216ENST00000464275 PUM3Q15397 648 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-216ENST00000464275 BLOC1S2Q6QNY1 142 aa25.96■■□□□ 1.75
PDLIM2-216ENST00000464275 MPHOSPH8Q99549 860 aa25.96■■□□□ 1.75
PDLIM2-216ENST00000464275 DSCC1Q9BVC3 393 aa25.96■■□□□ 1.75
PDLIM2-216ENST00000464275 ALDH8A1Q9H2A2 487 aaPredicted RBP25.96■■□□□ 1.75
PDLIM2-216ENST00000464275 ZDHHC9Q9Y397 364 aa25.96■■□□□ 1.75
PDLIM2-216ENST00000464275 FGFR2P21802 821 aa25.95■■□□□ 1.75
PDLIM2-216ENST00000464275 ZAP70P43403 619 aa25.95■■□□□ 1.75
PDLIM2-216ENST00000464275 SCARF1Q14162 830 aa25.95■■□□□ 1.75
PDLIM2-216ENST00000464275 LPIN2Q92539 896 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms