RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 FPGT-TNNI3KV9GXZ4 949 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 DDX60Q8IY21 1712 aaKnown RBP17.62■□□□□ 0.41
COL5A1-205ENST00000464187 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
COL5A1-205ENST00000464187 CHMLP26374 656 aa17.62■□□□□ 0.41
COL5A1-205ENST00000464187 MCM4P33991 863 aa17.62■□□□□ 0.41
COL5A1-205ENST00000464187 CNBD1Q8NA66 436 aa17.62■□□□□ 0.41
COL5A1-205ENST00000464187 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
COL5A1-205ENST00000464187 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 TTC41PQ6P2S7 1318 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 SLC15A2Q16348 729 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 RILPL2Q969X0 211 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 NLRP3Q96P20 1036 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 CNNM1Q9NRU3 951 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 ECHDC1Q9NTX5 307 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 CEP126Q9P2H0 1117 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
COL5A1-205ENST00000464187 LAMB2P55268 1798 aa17.6■□□□□ 0.41
COL5A1-205ENST00000464187 SERPINB2P05120 415 aa17.6■□□□□ 0.41
COL5A1-205ENST00000464187 NLGN1Q8N2Q7 840 aa17.6■□□□□ 0.41
COL5A1-205ENST00000464187 GPR108Q9NPR9 543 aa17.6■□□□□ 0.41
COL5A1-205ENST00000464187 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
COL5A1-205ENST00000464187 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
COL5A1-205ENST00000464187 HSP90AA1P07900 732 aaKnown RBP17.59■□□□□ 0.41
COL5A1-205ENST00000464187 DDR1Q08345 913 aa17.59■□□□□ 0.41
COL5A1-205ENST00000464187 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
COL5A1-205ENST00000464187 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
COL5A1-205ENST00000464187 DBNLQ9UJU6 430 aaKnown RBP17.59■□□□□ 0.41
COL5A1-205ENST00000464187 POLRMTO00411 1230 aaKnown RBP17.58■□□□□ 0.41
COL5A1-205ENST00000464187 GLRX3O76003 335 aaKnown RBP17.58■□□□□ 0.41
COL5A1-205ENST00000464187 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
COL5A1-205ENST00000464187 TIMM10P62072 90 aa17.58■□□□□ 0.4
COL5A1-205ENST00000464187 RAB3GAP1Q15042 981 aa17.58■□□□□ 0.4
COL5A1-205ENST00000464187 METTL24Q5JXM2 366 aa17.58■□□□□ 0.4
COL5A1-205ENST00000464187 CCDC125Q86Z20 511 aa17.58■□□□□ 0.4
COL5A1-205ENST00000464187 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
COL5A1-205ENST00000464187 RIC1Q4ADV7 1423 aa17.57■□□□□ 0.4
COL5A1-205ENST00000464187 A0A1B0GUL7 405 aa17.57■□□□□ 0.4
COL5A1-205ENST00000464187 NEUROD6Q96NK8 337 aa17.57■□□□□ 0.4
COL5A1-205ENST00000464187 DBNDD2Q9BQY9 259 aa17.57■□□□□ 0.4
COL5A1-205ENST00000464187 ST5P78524 1137 aa17.56■□□□□ 0.4
COL5A1-205ENST00000464187 TNPO1Q92973 898 aaKnown RBP17.56■□□□□ 0.4
COL5A1-205ENST00000464187 AKAP2Q9Y2D5 859 aa17.56■□□□□ 0.4
COL5A1-205ENST00000464187 MROH5Q6ZUA9 1318 aa17.56■□□□□ 0.4
COL5A1-205ENST00000464187 ZNF609O15014 1411 aa17.56■□□□□ 0.4
COL5A1-205ENST00000464187 LRP5O75197 1615 aa17.56■□□□□ 0.4
COL5A1-205ENST00000464187 MAP4K4O95819 1239 aaPredicted RBP17.56■□□□□ 0.4
COL5A1-205ENST00000464187 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
COL5A1-205ENST00000464187 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
COL5A1-205ENST00000464187 ST18O60284 1047 aa17.55■□□□□ 0.4
COL5A1-205ENST00000464187 PDE8BO95263 885 aa17.54■□□□□ 0.4
COL5A1-205ENST00000464187 MSL1Q68DK7 614 aa17.54■□□□□ 0.4
COL5A1-205ENST00000464187 CELF1Q92879 486 aaKnown RBP17.54■□□□□ 0.4
COL5A1-205ENST00000464187 IL25Q9H293 177 aa17.54■□□□□ 0.4
COL5A1-205ENST00000464187 DDX11L8A8MPP1 907 aa17.54■□□□□ 0.4
COL5A1-205ENST00000464187 MMP10P09238 476 aa17.54■□□□□ 0.4
COL5A1-205ENST00000464187 ANO2Q9NQ90 1003 aa17.54■□□□□ 0.4
COL5A1-205ENST00000464187 ATP5JP18859 108 aa17.53■□□□□ 0.4
COL5A1-205ENST00000464187 MCCP23508 829 aa17.53■□□□□ 0.4
COL5A1-205ENST00000464187 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
COL5A1-205ENST00000464187 DDX46Q7L014 1031 aaKnown RBP17.53■□□□□ 0.4
COL5A1-205ENST00000464187 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
COL5A1-205ENST00000464187 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
COL5A1-205ENST00000464187 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
COL5A1-205ENST00000464187 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
COL5A1-205ENST00000464187 PALD1Q9ULE6 856 aa17.53■□□□□ 0.4
COL5A1-205ENST00000464187 COL4A1P02462 1669 aa17.52■□□□□ 0.4
COL5A1-205ENST00000464187 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.39
COL5A1-205ENST00000464187 ANAPC15P60006 121 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 RPS8P62241 208 aaKnown RBP17.51■□□□□ 0.39
COL5A1-205ENST00000464187 CHRNDQ07001 517 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 IL17RAQ96F46 866 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 PARP3Q9Y6F1 533 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 TAF5LO75529 589 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 ADORA1P30542 326 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 PUM3Q15397 648 aaKnown RBP17.51■□□□□ 0.39
COL5A1-205ENST00000464187 CRY2Q49AN0 593 aa17.51■□□□□ 0.39
COL5A1-205ENST00000464187 EPB41L2O43491 1005 aaKnown RBP17.5■□□□□ 0.39
COL5A1-205ENST00000464187 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
COL5A1-205ENST00000464187 GBP4Q96PP9 640 aa17.5■□□□□ 0.39
COL5A1-205ENST00000464187 SGSM2O43147 1006 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 TRAK2O60296 914 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 FGFR2P21802 821 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 LPIN2Q92539 896 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 RPGRQ92834 1020 aaKnown RBP17.49■□□□□ 0.39
COL5A1-205ENST00000464187 EVI5LQ96CN4 794 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 PDGFDQ9GZP0 370 aaPredicted RBP17.49■□□□□ 0.39
COL5A1-205ENST00000464187 MINPP1Q9UNW1 487 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 SNAP23O00161 211 aa17.49■□□□□ 0.39
COL5A1-205ENST00000464187 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
COL5A1-205ENST00000464187 NEK4P51957 841 aa17.48■□□□□ 0.39
COL5A1-205ENST00000464187 GRAPQ13588 217 aa17.48■□□□□ 0.39
COL5A1-205ENST00000464187 GRAPLQ8TC17 118 aaPredicted RBP17.48■□□□□ 0.39
COL5A1-205ENST00000464187 HAUS7Q99871 368 aa17.48■□□□□ 0.39
COL5A1-205ENST00000464187 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
COL5A1-205ENST00000464187 RAD50Q92878 1312 aa17.48■□□□□ 0.39
COL5A1-205ENST00000464187 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms