RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TTC39BQ5VTQ0 682 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-208ENST00000464001 OR13H1Q8NG92 308 aa8.56□□□□□ -1.04
ITGB1-208ENST00000464001 SEPT3Q9UH03 358 aa8.56□□□□□ -1.04
ITGB1-208ENST00000464001 ZBTB39O15060 712 aa8.55□□□□□ -1.04
ITGB1-208ENST00000464001 CACTIN-AS1Q8N1I8 211 aa8.55□□□□□ -1.04
ITGB1-208ENST00000464001 SPACA7Q96KW9 195 aa8.55□□□□□ -1.04
ITGB1-208ENST00000464001 HYAL2Q12891 473 aa8.54□□□□□ -1.04
ITGB1-208ENST00000464001 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-208ENST00000464001 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
ITGB1-208ENST00000464001 IL22RA1Q8N6P7 574 aa8.54□□□□□ -1.04
ITGB1-208ENST00000464001 DYRK3O43781 588 aa8.53□□□□□ -1.04
ITGB1-208ENST00000464001 RPLP1P05386 114 aaKnown RBP8.53□□□□□ -1.04
ITGB1-208ENST00000464001 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
ITGB1-208ENST00000464001 SRA1Q9HD15 236 aaKnown RBP8.53□□□□□ -1.04
ITGB1-208ENST00000464001 H2AFB1P0C5Y9 115 aa8.52□□□□□ -1.05
ITGB1-208ENST00000464001 H2AFB2P0C5Z0 115 aa8.52□□□□□ -1.05
ITGB1-208ENST00000464001 ITGB7P26010 798 aa8.52□□□□□ -1.05
ITGB1-208ENST00000464001 SCNN1AP37088 669 aa8.52□□□□□ -1.05
ITGB1-208ENST00000464001 HELQQ8TDG4 1101 aa8.52□□□□□ -1.05
ITGB1-208ENST00000464001 MUC3BQ9H195 1237 aa8.52□□□□□ -1.05
ITGB1-208ENST00000464001 ABI2Q9NYB9 513 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-208ENST00000464001 DEAF1O75398 565 aaPredicted RBP8.51□□□□□ -1.05
ITGB1-208ENST00000464001 PCSK2P16519 638 aa8.51□□□□□ -1.05
ITGB1-208ENST00000464001 PDE12Q6L8Q7 609 aaKnown RBP8.51□□□□□ -1.05
ITGB1-208ENST00000464001 MAP4K3Q8IVH8 894 aa8.51□□□□□ -1.05
ITGB1-208ENST00000464001 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
ITGB1-208ENST00000464001 TP53INP1Q96A56 240 aa8.51□□□□□ -1.05
ITGB1-208ENST00000464001 NUDT16Q96DE0 195 aaKnown RBP8.51□□□□□ -1.05
ITGB1-208ENST00000464001 DLL1O00548 723 aa8.5□□□□□ -1.05
ITGB1-208ENST00000464001 SMNDC1O75940 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
ITGB1-208ENST00000464001 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
ITGB1-208ENST00000464001 C14orf37Q86TY3 774 aa8.5□□□□□ -1.05
ITGB1-208ENST00000464001 TTC16Q8NEE8 873 aa8.5□□□□□ -1.05
ITGB1-208ENST00000464001 ELP3Q9H9T3 547 aa8.5□□□□□ -1.05
ITGB1-208ENST00000464001 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
ITGB1-208ENST00000464001 TMEM88BA6NKF7 163 aa8.49□□□□□ -1.05
ITGB1-208ENST00000464001 SSFA2P28290 1259 aa8.49□□□□□ -1.05
ITGB1-208ENST00000464001 IREB2P48200 963 aaKnown RBP8.49□□□□□ -1.05
ITGB1-208ENST00000464001 ZMYM1Q5SVZ6 1142 aa8.49□□□□□ -1.05
ITGB1-208ENST00000464001 COL13A1Q5TAT6 717 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-208ENST00000464001 ZNF438Q7Z4V0 828 aa8.49□□□□□ -1.05
ITGB1-208ENST00000464001 ATCAYQ86WG3 371 aa8.49□□□□□ -1.05
ITGB1-208ENST00000464001 Q8N3U1 123 aa8.49□□□□□ -1.05
ITGB1-208ENST00000464001 PPME1Q9Y570 386 aa8.49□□□□□ -1.05
ITGB1-208ENST00000464001 KIF4AO95239 1232 aa8.48□□□□□ -1.05
ITGB1-208ENST00000464001 NOS3P29474 1203 aa8.48□□□□□ -1.05
ITGB1-208ENST00000464001 CEP135Q66GS9 1140 aa8.48□□□□□ -1.05
ITGB1-208ENST00000464001 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
ITGB1-208ENST00000464001 GTF3C2Q8WUA4 911 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-208ENST00000464001 EDEM1Q92611 657 aa8.48□□□□□ -1.05
ITGB1-208ENST00000464001 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-208ENST00000464001 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
ITGB1-208ENST00000464001 C1orf115Q9H7X2 142 aa8.48□□□□□ -1.05
ITGB1-208ENST00000464001 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
ITGB1-208ENST00000464001 DNM1Q05193 864 aaKnown RBP8.47□□□□□ -1.05
ITGB1-208ENST00000464001 SETDB1Q15047 1291 aa8.47□□□□□ -1.05
ITGB1-208ENST00000464001 PRSS36Q5K4E3 855 aa8.47□□□□□ -1.05
ITGB1-208ENST00000464001 XP32Q5T750 250 aa8.47□□□□□ -1.05
ITGB1-208ENST00000464001 XKR5Q6UX68 686 aa8.47□□□□□ -1.05
ITGB1-208ENST00000464001 NCAPG2Q86XI2 1143 aa8.47□□□□□ -1.05
ITGB1-208ENST00000464001 CYP2E1P05181 493 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-208ENST00000464001 MZF1P28698 734 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-208ENST00000464001 CDC27P30260 824 aa8.46□□□□□ -1.06
ITGB1-208ENST00000464001 ATP11AP98196 1134 aa8.46□□□□□ -1.06
ITGB1-208ENST00000464001 TMEM130Q8N3G9 435 aa8.46□□□□□ -1.06
ITGB1-208ENST00000464001 LACRTQ9GZZ8 138 aa8.46□□□□□ -1.06
ITGB1-208ENST00000464001 AKTIPQ9H8T0 292 aa8.46□□□□□ -1.06
ITGB1-208ENST00000464001 TMEM63CQ9P1W3 806 aa8.46□□□□□ -1.06
ITGB1-208ENST00000464001 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
ITGB1-208ENST00000464001 PDGFAP04085 211 aa8.45□□□□□ -1.06
ITGB1-208ENST00000464001 MPSTP25325 297 aa8.45□□□□□ -1.06
ITGB1-208ENST00000464001 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
ITGB1-208ENST00000464001 C8orf34Q49A92 452 aa8.45□□□□□ -1.06
ITGB1-208ENST00000464001 PBX4Q9BYU1 374 aa8.45□□□□□ -1.06
ITGB1-208ENST00000464001 RASSF4Q9H2L5 321 aa8.45□□□□□ -1.06
ITGB1-208ENST00000464001 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
ITGB1-208ENST00000464001 AAMPQ13685 434 aa8.44□□□□□ -1.06
ITGB1-208ENST00000464001 FAM117BQ6P1L5 589 aa8.44□□□□□ -1.06
ITGB1-208ENST00000464001 CEP120Q8N960 986 aa8.44□□□□□ -1.06
ITGB1-208ENST00000464001 PMEPA1Q969W9 287 aa8.44□□□□□ -1.06
ITGB1-208ENST00000464001 CNTN3Q9P232 1028 aa8.44□□□□□ -1.06
ITGB1-208ENST00000464001 FAM13AO94988 1023 aa8.43□□□□□ -1.06
ITGB1-208ENST00000464001 CES1P23141 567 aa8.43□□□□□ -1.06
ITGB1-208ENST00000464001 MEGF10Q96KG7 1140 aa8.43□□□□□ -1.06
ITGB1-208ENST00000464001 GGNBP2Q9H3C7 697 aa8.43□□□□□ -1.06
ITGB1-208ENST00000464001 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
ITGB1-208ENST00000464001 F8W735 103 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-208ENST00000464001 PTPRAP18433 802 aa8.42□□□□□ -1.06
ITGB1-208ENST00000464001 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
ITGB1-208ENST00000464001 KANSL3Q9P2N6 904 aa8.42□□□□□ -1.06
ITGB1-208ENST00000464001 SALL4Q9UJQ4 1053 aa8.42□□□□□ -1.06
ITGB1-208ENST00000464001 ALX3O95076 343 aa8.41□□□□□ -1.06
ITGB1-208ENST00000464001 NPR3P17342 541 aa8.41□□□□□ -1.06
ITGB1-208ENST00000464001 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
ITGB1-208ENST00000464001 MTMR3Q13615 1198 aa8.41□□□□□ -1.06
ITGB1-208ENST00000464001 POLIQ9UNA4 740 aa8.41□□□□□ -1.06
ITGB1-208ENST00000464001 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-208ENST00000464001 USP5P45974 858 aa8.4□□□□□ -1.06
ITGB1-208ENST00000464001 FKBP4Q02790 459 aaKnown RBP eCLIP8.4□□□□□ -1.06
ITGB1-208ENST00000464001 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms