RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 PDE12Q6L8Q7 609 aaKnown RBP7.43□□□□□ -1.22
USP9X-204ENST00000463829 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
USP9X-204ENST00000463829 Q8N3U1 123 aa7.43□□□□□ -1.22
USP9X-204ENST00000463829 TRIM28Q13263 835 aaKnown RBP7.42□□□□□ -1.22
USP9X-204ENST00000463829 ZNF438Q7Z4V0 828 aa7.42□□□□□ -1.22
USP9X-204ENST00000463829 PNMA5Q96PV4 448 aa7.42□□□□□ -1.22
USP9X-204ENST00000463829 M0R082 166 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 SASH3O75995 380 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 NEFLP07196 543 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 PLCB3Q01970 1234 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 NLRP13Q86W25 1043 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 ZNF417Q8TAU3 575 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 TNFRSF25Q93038 417 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 NACC1Q96RE7 527 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 ZNF587Q96SQ5 575 aaPredicted RBP7.41□□□□□ -1.22
USP9X-204ENST00000463829 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
USP9X-204ENST00000463829 A6NHS1 94 aa7.4□□□□□ -1.22
USP9X-204ENST00000463829 TREHO43280 583 aa7.4□□□□□ -1.22
USP9X-204ENST00000463829 IGHA2P01877 340 aa7.4□□□□□ -1.22
USP9X-204ENST00000463829 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
USP9X-204ENST00000463829 KRT25Q7Z3Z0 450 aa7.4□□□□□ -1.22
USP9X-204ENST00000463829 RGS22Q8NE09 1264 aa7.4□□□□□ -1.22
USP9X-204ENST00000463829 ALKBH8Q96BT7 664 aaKnown RBP7.4□□□□□ -1.22
USP9X-204ENST00000463829 SLC30A3Q99726 388 aa7.4□□□□□ -1.22
USP9X-204ENST00000463829 NIF3L1Q9GZT8 377 aa7.4□□□□□ -1.22
USP9X-204ENST00000463829 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.4□□□□□ -1.22
USP9X-204ENST00000463829 GPR182O15218 404 aa7.39□□□□□ -1.23
USP9X-204ENST00000463829 ADH7P40394 386 aa7.39□□□□□ -1.23
USP9X-204ENST00000463829 DSC3Q14574 896 aa7.39□□□□□ -1.23
USP9X-204ENST00000463829 COL19A1Q14993 1142 aa7.39□□□□□ -1.23
USP9X-204ENST00000463829 TTC39BQ5VTQ0 682 aaPredicted RBP7.39□□□□□ -1.23
USP9X-204ENST00000463829 BHMTQ93088 406 aa7.39□□□□□ -1.23
USP9X-204ENST00000463829 PRDM6Q9NQX0 595 aa7.39□□□□□ -1.23
USP9X-204ENST00000463829 ABI2Q9NYB9 513 aaPredicted RBP7.39□□□□□ -1.23
USP9X-204ENST00000463829 TNFRSF21O75509 655 aa7.38□□□□□ -1.23
USP9X-204ENST00000463829 RARAP10276 462 aa7.38□□□□□ -1.23
USP9X-204ENST00000463829 NFKB1P19838 968 aa7.38□□□□□ -1.23
USP9X-204ENST00000463829 NPAS4Q8IUM7 802 aa7.38□□□□□ -1.23
USP9X-204ENST00000463829 MICALL1Q8N3F8 863 aa7.38□□□□□ -1.23
USP9X-204ENST00000463829 TMEM63CQ9P1W3 806 aa7.38□□□□□ -1.23
USP9X-204ENST00000463829 MAP3K6O95382 1288 aa7.37□□□□□ -1.23
USP9X-204ENST00000463829 ZMYM1Q5SVZ6 1142 aa7.37□□□□□ -1.23
USP9X-204ENST00000463829 TRAPPC3LQ5T215 181 aa7.37□□□□□ -1.23
USP9X-204ENST00000463829 RAB44Q7Z6P3 723 aaPredicted RBP7.37□□□□□ -1.23
USP9X-204ENST00000463829 SNX29Q8TEQ0 813 aa7.37□□□□□ -1.23
USP9X-204ENST00000463829 PMEPA1Q969W9 287 aa7.37□□□□□ -1.23
USP9X-204ENST00000463829 MDFIQ99750 246 aa7.37□□□□□ -1.23
USP9X-204ENST00000463829 ZFATQ9P243 1243 aa7.37□□□□□ -1.23
USP9X-204ENST00000463829 MMP20O60882 483 aa7.36□□□□□ -1.23
USP9X-204ENST00000463829 LILRB5O75023 590 aa7.36□□□□□ -1.23
USP9X-204ENST00000463829 PHACTR2O75167 634 aa7.36□□□□□ -1.23
USP9X-204ENST00000463829 ALBP02768 609 aa7.36□□□□□ -1.23
USP9X-204ENST00000463829 FMR1Q06787 632 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP9X-204ENST00000463829 TBC1D8BQ0IIM8 1120 aa7.36□□□□□ -1.23
USP9X-204ENST00000463829 STARD13Q9Y3M8 1113 aa7.36□□□□□ -1.23
USP9X-204ENST00000463829 PSAPP07602 524 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 MAPK8P45983 427 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 EAPPQ56P03 285 aaPredicted RBP7.35□□□□□ -1.23
USP9X-204ENST00000463829 CSRNP1Q96S65 589 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 UBE2OQ9C0C9 1292 aaKnown RBP7.35□□□□□ -1.23
USP9X-204ENST00000463829 DNAJC25Q9H1X3 360 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 IGFLR1Q9H665 355 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 ZFYVE28Q9HCC9 887 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 TLR7Q9NYK1 1049 aaKnown RBP7.35□□□□□ -1.23
USP9X-204ENST00000463829 CNTN3Q9P232 1028 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 FOXD3Q9UJU5 478 aaPredicted RBP7.35□□□□□ -1.23
USP9X-204ENST00000463829 AMOTL2Q9Y2J4 779 aa7.35□□□□□ -1.23
USP9X-204ENST00000463829 C9orf172C9J069 976 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 EIF1AYO14602 144 aaKnown RBP7.34□□□□□ -1.23
USP9X-204ENST00000463829 CPNE3O75131 537 aaKnown RBP7.34□□□□□ -1.23
USP9X-204ENST00000463829 P4HBP07237 508 aaKnown RBP7.34□□□□□ -1.23
USP9X-204ENST00000463829 CES1P23141 567 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 SOX18P35713 384 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 FGD1P98174 961 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 ORC1Q13415 861 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 PCSK7Q16549 785 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 DHX32Q7L7V1 743 aaKnown RBP7.34□□□□□ -1.23
USP9X-204ENST00000463829 C1orf127Q8N9H9 656 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 OR13H1Q8NG92 308 aa7.34□□□□□ -1.23
USP9X-204ENST00000463829 RAC1P63000 192 aa7.33□□□□□ -1.24
USP9X-204ENST00000463829 PLAURQ03405 335 aa7.33□□□□□ -1.24
USP9X-204ENST00000463829 ENOX2Q16206 610 aaKnown RBP7.33□□□□□ -1.24
USP9X-204ENST00000463829 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
USP9X-204ENST00000463829 C8orf86Q6ZUL3 223 aa7.33□□□□□ -1.24
USP9X-204ENST00000463829 FOXD4L4Q8WXT5 416 aaPredicted RBP7.33□□□□□ -1.24
USP9X-204ENST00000463829 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
USP9X-204ENST00000463829 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
USP9X-204ENST00000463829 TPSG1Q9NRR2 321 aa7.33□□□□□ -1.24
USP9X-204ENST00000463829 PNMA6FA0A0J9YX94 578 aa7.32□□□□□ -1.24
USP9X-204ENST00000463829 SCO2A0A1W2PP80 73 aa7.32□□□□□ -1.24
USP9X-204ENST00000463829 NID1P14543 1247 aa7.32□□□□□ -1.24
USP9X-204ENST00000463829 NRLP54845 237 aa7.32□□□□□ -1.24
USP9X-204ENST00000463829 ATP2B2Q01814 1243 aa7.32□□□□□ -1.24
USP9X-204ENST00000463829 COL9A3Q14050 684 aaPredicted RBP7.32□□□□□ -1.24
USP9X-204ENST00000463829 GRIK4Q16099 956 aa7.32□□□□□ -1.24
USP9X-204ENST00000463829 FBXO33Q7Z6M2 555 aa7.32□□□□□ -1.24
USP9X-204ENST00000463829 LDHBP07195 334 aaKnown RBP7.31□□□□□ -1.24
USP9X-204ENST00000463829 HOXD8P13378 290 aaPredicted RBP7.31□□□□□ -1.24
USP9X-204ENST00000463829 HYAL2Q12891 473 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms