RNA–Protein interactions for RNA: ENST00000463783.1

NCBP2-209, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 4,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-209ENST00000463783 SMC3Q9UQE7 1217 aa9.98□□□□□ -0.81
NCBP2-209ENST00000463783 MRVI1Q9Y6F6 885 aa9.98□□□□□ -0.81
NCBP2-209ENST00000463783 KDM4AO75164 1064 aa9.98□□□□□ -0.81
NCBP2-209ENST00000463783 OS9Q13438 667 aaPredicted RBP9.98□□□□□ -0.81
NCBP2-209ENST00000463783 SNRKQ9NRH2 765 aa9.98□□□□□ -0.81
NCBP2-209ENST00000463783 DIAPH3Q9NSV4 1193 aa9.98□□□□□ -0.81
NCBP2-209ENST00000463783 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
NCBP2-209ENST00000463783 ARAP2Q8WZ64 1704 aa9.98□□□□□ -0.81
NCBP2-209ENST00000463783 TEFQ10587 303 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 CKAP2LQ8IYA6 745 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 SPC24Q8NBT2 197 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 LRMPQ12912 555 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 NFATC2IPQ8NCF5 419 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 SLC4A9Q96Q91 983 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 ANP32BQ92688 251 aaKnown RBP9.97□□□□□ -0.81
NCBP2-209ENST00000463783 PALLDQ8WX93 1383 aa9.97□□□□□ -0.81
NCBP2-209ENST00000463783 TAF5LO75529 589 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 HOXB7P09629 217 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.81
NCBP2-209ENST00000463783 CLASRPQ8N2M8 674 aaKnown RBP9.96□□□□□ -0.81
NCBP2-209ENST00000463783 ERCC4Q92889 916 aaPredicted RBP9.96□□□□□ -0.81
NCBP2-209ENST00000463783 SPEF2Q9C093 1822 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 AFF2P51816 1311 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 NR1I2O75469 434 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 PTPN12Q05209 780 aaKnown RBP9.96□□□□□ -0.81
NCBP2-209ENST00000463783 NOLC1Q14978 699 aaKnown RBP eCLIP9.96□□□□□ -0.81
NCBP2-209ENST00000463783 PIBF1Q8WXW3 757 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 ZNF496Q96IT1 587 aaPredicted RBP9.96□□□□□ -0.81
NCBP2-209ENST00000463783 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 BTG4Q9NY30 223 aa9.96□□□□□ -0.81
NCBP2-209ENST00000463783 CTDNEP1O95476 244 aa9.96□□□□□ -0.82
NCBP2-209ENST00000463783 TFCP2Q12800 502 aa9.96□□□□□ -0.82
NCBP2-209ENST00000463783 MARCH10Q8NA82 808 aaPredicted RBP9.96□□□□□ -0.82
NCBP2-209ENST00000463783 XAGE3Q8WTP9 111 aa9.96□□□□□ -0.82
NCBP2-209ENST00000463783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.828e-8■■□□□ 13.4
NCBP2-209ENST00000463783 ATP5J2-PTCD1G3V325 749 aa9.96□□□□□ -0.82
NCBP2-209ENST00000463783 PTCD1O75127 700 aaKnown RBP9.96□□□□□ -0.82
NCBP2-209ENST00000463783 ADD1P35611 737 aaKnown RBP9.96□□□□□ -0.82
NCBP2-209ENST00000463783 ARID5BQ14865 1188 aa9.96□□□□□ -0.82
NCBP2-209ENST00000463783 COPS6Q7L5N1 327 aa9.96□□□□□ -0.82
NCBP2-209ENST00000463783 TAF1P21675 1872 aa9.96□□□□□ -0.82
NCBP2-209ENST00000463783 EPB41L2O43491 1005 aaKnown RBP9.95□□□□□ -0.82
NCBP2-209ENST00000463783 IFIT2P09913 472 aaKnown RBP9.95□□□□□ -0.82
NCBP2-209ENST00000463783 NAA30Q147X3 362 aaPredicted RBP9.95□□□□□ -0.82
NCBP2-209ENST00000463783 EVI5LQ96CN4 794 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 CYP21A2P08686 494 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 FOSBP53539 338 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 MYD88Q99836 296 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
NCBP2-209ENST00000463783 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
NCBP2-209ENST00000463783 CYP46A1Q9Y6A2 500 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 RPS6KB1P23443 525 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 CASP7P55210 303 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 PLCB2Q00722 1185 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 GCKRQ14397 625 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 LINS1Q8NG48 757 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 TM6SF1Q9BZW5 370 aa9.95□□□□□ -0.82
NCBP2-209ENST00000463783 FOXP2O15409 715 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 CCDC144BQ3MJ40 725 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 SPTLC3Q9NUV7 552 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 PRDM4Q9UKN5 801 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 ECM29Q5VYK3 1845 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 ALDH1L1O75891 902 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 TERF1P54274 439 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 KIAA1524Q8TCG1 905 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
NCBP2-209ENST00000463783 PRDM10Q9NQV6 1147 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 DACT1Q9NYF0 836 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 PTGS1P23219 599 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 LARP1BQ659C4 914 aaKnown RBP9.94□□□□□ -0.82
NCBP2-209ENST00000463783 SASS6Q6UVJ0 657 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 CHST3Q7LGC8 479 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 GOLPH3LQ9H4A5 285 aa9.94□□□□□ -0.82
NCBP2-209ENST00000463783 DDX21Q9NR30 783 aaKnown RBP eCLIP9.94□□□□□ -0.82
NCBP2-209ENST00000463783 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
NCBP2-209ENST00000463783 SCRN1Q12765 414 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 ATP2B3Q16720 1220 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 DDX46Q7L014 1031 aaKnown RBP9.93□□□□□ -0.82
NCBP2-209ENST00000463783 KIAA2012Q0VF49 1180 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 AMIGO3Q86WK7 504 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 FSD1Q9BTV5 496 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 DENND2AQ9ULE3 1009 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 PHKG2P15735 406 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 PLEKHO1Q53GL0 409 aaPredicted RBP9.93□□□□□ -0.82
NCBP2-209ENST00000463783 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 GJB4Q9NTQ9 266 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 PTMAP06454 111 aaKnown RBP9.93□□□□□ -0.82
NCBP2-209ENST00000463783 MCM5P33992 734 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 RESTQ13127 1097 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 MYRIPQ8NFW9 859 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 LEO1Q8WVC0 666 aaPredicted RBP9.93□□□□□ -0.82
NCBP2-209ENST00000463783 CBX8Q9HC52 389 aa9.93□□□□□ -0.82
NCBP2-209ENST00000463783 NCOA5Q9HCD5 579 aaKnown RBP9.92□□□□□ -0.82
NCBP2-209ENST00000463783 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
NCBP2-209ENST00000463783 CEBPZQ03701 1054 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms