RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
TM9SF2-202ENST00000463709 ELOA3Q8NG57 546 aa8.35□□□□□ -1.07
TM9SF2-202ENST00000463709 FAM129BQ96TA1 746 aa8.35□□□□□ -1.07
TM9SF2-202ENST00000463709 PLVAPQ9BX97 442 aa8.35□□□□□ -1.07
TM9SF2-202ENST00000463709 FNDC3AQ9Y2H6 1198 aaKnown RBP8.35□□□□□ -1.07
TM9SF2-202ENST00000463709 POLR3DP05423 398 aaPredicted RBP8.34□□□□□ -1.07
TM9SF2-202ENST00000463709 USP5P45974 858 aa8.34□□□□□ -1.07
TM9SF2-202ENST00000463709 HFE2Q6ZVN8 426 aa8.34□□□□□ -1.07
TM9SF2-202ENST00000463709 C1orf127Q8N9H9 656 aa8.34□□□□□ -1.07
TM9SF2-202ENST00000463709 ASB16Q96NS5 453 aa8.34□□□□□ -1.07
TM9SF2-202ENST00000463709 MDFIQ99750 246 aa8.34□□□□□ -1.07
TM9SF2-202ENST00000463709 KANSL3Q9P2N6 904 aa8.34□□□□□ -1.07
TM9SF2-202ENST00000463709 TNFRSF21O75509 655 aa8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 EGFRP00533 1210 aa8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 TTC39BQ5VTQ0 682 aaPredicted RBP8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 ZSCAN29Q8IWY8 852 aaPredicted RBP8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 FOXD4L4Q8WXT5 416 aaPredicted RBP8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 NSUN5Q96P11 429 aaKnown RBP8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
TM9SF2-202ENST00000463709 ALAS2P22557 587 aa8.32□□□□□ -1.08
TM9SF2-202ENST00000463709 PDE3BQ13370 1112 aa8.32□□□□□ -1.08
TM9SF2-202ENST00000463709 DOC2BQ14184 412 aa8.32□□□□□ -1.08
TM9SF2-202ENST00000463709 COL13A1Q5TAT6 717 aaPredicted RBP8.32□□□□□ -1.08
TM9SF2-202ENST00000463709 PDE12Q6L8Q7 609 aaKnown RBP8.32□□□□□ -1.08
TM9SF2-202ENST00000463709 UBE2OQ9C0C9 1292 aaKnown RBP8.32□□□□□ -1.08
TM9SF2-202ENST00000463709 ABI2Q9NYB9 513 aaPredicted RBP8.32□□□□□ -1.08
TM9SF2-202ENST00000463709 ZBTB42B2RXF5 422 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 J3QW42 95 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 PHACTR2O75167 634 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 RPLP1P05386 114 aaKnown RBP8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 ITGB7P26010 798 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 MAPK8P45983 427 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 TAGLNQ01995 201 aaKnown RBP8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 EHHADHQ08426 723 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 DHX32Q7L7V1 743 aaKnown RBP8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 CHRDQ9H2X0 955 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
TM9SF2-202ENST00000463709 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 EREGO14944 169 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 TREHO43280 583 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 SIN3BO75182 1162 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 GATA4P43694 442 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 DSC3Q14574 896 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 NPAS4Q8IUM7 802 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 DMRTB1Q96MA1 342 aa8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 DNAJB12Q9NXW2 375 aaKnown RBP8.3□□□□□ -1.08
TM9SF2-202ENST00000463709 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
TM9SF2-202ENST00000463709 PSAPP07602 524 aa8.29□□□□□ -1.08
TM9SF2-202ENST00000463709 ACPPP15309 386 aa8.29□□□□□ -1.08
TM9SF2-202ENST00000463709 NEUROD1Q13562 356 aa8.29□□□□□ -1.08
TM9SF2-202ENST00000463709 XKR5Q6UX68 686 aa8.29□□□□□ -1.08
TM9SF2-202ENST00000463709 TLR7Q9NYK1 1049 aaKnown RBP8.29□□□□□ -1.08
TM9SF2-202ENST00000463709 PNMA6FA0A0J9YX94 578 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 TRPA1O75762 1119 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 CES1P23141 567 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 OR13H1Q8NG92 308 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 SNX29Q8TEQ0 813 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 SEMA6BQ9H3T3 888 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 ZFYVE28Q9HCC9 887 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 LATS2Q9NRM7 1088 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 RNF19AQ9NV58 838 aa8.28□□□□□ -1.08
TM9SF2-202ENST00000463709 MAP3K6O95382 1288 aa8.27□□□□□ -1.09
TM9SF2-202ENST00000463709 CPB1P15086 417 aa8.27□□□□□ -1.09
TM9SF2-202ENST00000463709 PRRT3Q5FWE3 981 aa8.27□□□□□ -1.09
TM9SF2-202ENST00000463709 RGS22Q8NE09 1264 aa8.27□□□□□ -1.09
TM9SF2-202ENST00000463709 C11orf16Q9NQ32 467 aa8.27□□□□□ -1.09
TM9SF2-202ENST00000463709 M0R082 166 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 ADH7P40394 386 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 PLAURQ03405 335 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 FMR1Q06787 632 aaKnown RBP eCLIP8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 COL9A3Q14050 684 aaPredicted RBP8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 PI16Q6UXB8 463 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 ZNF417Q8TAU3 575 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 CSRNP1Q96S65 589 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 ZNF587Q96SQ5 575 aaPredicted RBP8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 PRDM6Q9NQX0 595 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 SLC6A14Q9UN76 642 aa8.26□□□□□ -1.09
TM9SF2-202ENST00000463709 FAM35AQ86V20 835 aa8.25□□□□□ -1.09
TM9SF2-202ENST00000463709 NCAPG2Q86XI2 1143 aa8.25□□□□□ -1.09
TM9SF2-202ENST00000463709 ALKBH8Q96BT7 664 aaKnown RBP8.25□□□□□ -1.09
TM9SF2-202ENST00000463709 STARD13Q9Y3M8 1113 aa8.25□□□□□ -1.09
TM9SF2-202ENST00000463709 LOC102724428A0A0B4J2F2 783 aa8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 CPNE3O75131 537 aaKnown RBP8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 APBA3O96018 575 aa8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 EIF2AK2P19525 551 aaKnown RBP8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 SIK1P57059 783 aa8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 ATP11AP98196 1134 aa8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 RSPO4Q2I0M5 234 aaPredicted RBP8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 TRPM4Q8TD43 1214 aa8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 EPS8L3Q8TE67 593 aaKnown RBP8.24□□□□□ -1.09
TM9SF2-202ENST00000463709 NUDT8Q8WV74 236 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms