RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 TM4SF1P30408 202 aa23.15■■□□□ 1.3
CCDC78-206ENST00000463539 VGLL2Q8N8G2 317 aa23.15■■□□□ 1.3
CCDC78-206ENST00000463539 ATP2B3Q16720 1220 aa23.15■■□□□ 1.3
CCDC78-206ENST00000463539 EVI5LQ96CN4 794 aa23.15■■□□□ 1.3
CCDC78-206ENST00000463539 PDE8BO95263 885 aa23.14■■□□□ 1.29
CCDC78-206ENST00000463539 CHMLP26374 656 aa23.14■■□□□ 1.29
CCDC78-206ENST00000463539 BAG6P46379 1132 aa23.14■■□□□ 1.29
CCDC78-206ENST00000463539 PRR5LQ6MZQ0 368 aa23.14■■□□□ 1.29
CCDC78-206ENST00000463539 ANKRD18AQ8IVF6 992 aa23.14■■□□□ 1.29
CCDC78-206ENST00000463539 C22orf23Q9BZE7 217 aa23.14■■□□□ 1.29
CCDC78-206ENST00000463539 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
CCDC78-206ENST00000463539 SERPINB2P05120 415 aa23.13■■□□□ 1.29
CCDC78-206ENST00000463539 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
CCDC78-206ENST00000463539 ST5P78524 1137 aa23.12■■□□□ 1.29
CCDC78-206ENST00000463539 DDR1Q08345 913 aa23.12■■□□□ 1.29
CCDC78-206ENST00000463539 PUM3Q15397 648 aaKnown RBP23.12■■□□□ 1.29
CCDC78-206ENST00000463539 GORABQ5T7V8 394 aa23.12■■□□□ 1.29
CCDC78-206ENST00000463539 XAGE2Q96GT9 111 aa23.12■■□□□ 1.29
CCDC78-206ENST00000463539 POLRMTO00411 1230 aaKnown RBP23.11■■□□□ 1.29
CCDC78-206ENST00000463539 ANO8Q9HCE9 1232 aaPredicted RBP23.11■■□□□ 1.29
CCDC78-206ENST00000463539 STK32BQ9NY57 414 aa23.11■■□□□ 1.29
CCDC78-206ENST00000463539 ADORA1P30542 326 aa23.1■■□□□ 1.29
CCDC78-206ENST00000463539 SLC15A2Q16348 729 aa23.1■■□□□ 1.29
CCDC78-206ENST00000463539 CCDC158Q5M9N0 1113 aa23.1■■□□□ 1.29
CCDC78-206ENST00000463539 HAUS7Q99871 368 aa23.1■■□□□ 1.29
CCDC78-206ENST00000463539 ESYT1Q9BSJ8 1104 aa23.1■■□□□ 1.29
CCDC78-206ENST00000463539 REC8O95072 547 aa23.1■■□□□ 1.29
CCDC78-206ENST00000463539 DDX46Q7L014 1031 aaKnown RBP23.1■■□□□ 1.29
CCDC78-206ENST00000463539 HELBQ8NG08 1087 aaPredicted RBP23.1■■□□□ 1.29
CCDC78-206ENST00000463539 BSDC1Q9NW68 430 aaPredicted RBP23.1■■□□□ 1.29
CCDC78-206ENST00000463539 LPIN2Q92539 896 aa23.09■■□□□ 1.29
CCDC78-206ENST00000463539 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
CCDC78-206ENST00000463539 DNAJC2Q99543 621 aaKnown RBP23.09■■□□□ 1.29
CCDC78-206ENST00000463539 TNRC6CQ9HCJ0 1690 aaKnown RBP23.09■■□□□ 1.29
CCDC78-206ENST00000463539 TTC39AQ5SRH9 613 aa23.08■■□□□ 1.29
CCDC78-206ENST00000463539 COL4A1P02462 1669 aa23.08■■□□□ 1.29
CCDC78-206ENST00000463539 CHRNDQ07001 517 aa23.08■■□□□ 1.28
CCDC78-206ENST00000463539 DEFB132Q7Z7B7 95 aa23.08■■□□□ 1.28
CCDC78-206ENST00000463539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.08■■□□□ 1.28
CCDC78-206ENST00000463539 FSD1Q9BTV5 496 aa23.08■■□□□ 1.28
CCDC78-206ENST00000463539 DIAPH3Q9NSV4 1193 aa23.08■■□□□ 1.28
CCDC78-206ENST00000463539 TAF5LO75529 589 aa23.07■■□□□ 1.28
CCDC78-206ENST00000463539 FGFR2P21802 821 aa23.07■■□□□ 1.28
CCDC78-206ENST00000463539 RBM25P49756 843 aaKnown RBP23.07■■□□□ 1.28
CCDC78-206ENST00000463539 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
CCDC78-206ENST00000463539 HIP1O00291 1037 aa23.06■■□□□ 1.28
CCDC78-206ENST00000463539 IFIT1P09914 478 aaKnown RBP23.06■■□□□ 1.28
CCDC78-206ENST00000463539 SLC5A1P13866 664 aa23.06■■□□□ 1.28
CCDC78-206ENST00000463539 EDC3Q96F86 508 aaKnown RBP23.05■■□□□ 1.28
CCDC78-206ENST00000463539 DDRGK1Q96HY6 314 aa23.05■■□□□ 1.28
CCDC78-206ENST00000463539 IPO9Q96P70 1041 aaKnown RBP23.05■■□□□ 1.28
CCDC78-206ENST00000463539 NDUFB9Q9Y6M9 179 aa23.05■■□□□ 1.28
CCDC78-206ENST00000463539 CRY2Q49AN0 593 aa23.04■■□□□ 1.28
CCDC78-206ENST00000463539 CWC27Q6UX04 472 aaKnown RBP23.04■■□□□ 1.28
CCDC78-206ENST00000463539 RPGRQ92834 1020 aaKnown RBP23.04■■□□□ 1.28
CCDC78-206ENST00000463539 PAG1Q9NWQ8 432 aa23.04■■□□□ 1.28
CCDC78-206ENST00000463539 CASZ1Q86V15 1759 aa23.04■■□□□ 1.28
CCDC78-206ENST00000463539 MMP10P09238 476 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 RUFY2Q8WXA3 655 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 USP26Q9BXU7 913 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 MINPP1Q9UNW1 487 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 RFX7Q2KHR2 1363 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 GOLIM4O00461 696 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 SGSM2O43147 1006 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 MSL1Q68DK7 614 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 ANO2Q9NQ90 1003 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 PARP3Q9Y6F1 533 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 AK9Q5TCS8 1911 aa23.03■■□□□ 1.28
CCDC78-206ENST00000463539 GRAPQ13588 217 aa23.02■■□□□ 1.28
CCDC78-206ENST00000463539 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-206ENST00000463539 ZNF512BQ96KM6 892 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-206ENST00000463539 SNAP23O00161 211 aa23.01■■□□□ 1.27
CCDC78-206ENST00000463539 CCDC102BQ68D86 513 aa23.01■■□□□ 1.27
CCDC78-206ENST00000463539 CCDC125Q86Z20 511 aa23.01■■□□□ 1.27
CCDC78-206ENST00000463539 IL25Q9H293 177 aa23.01■■□□□ 1.27
CCDC78-206ENST00000463539 FKBP4Q02790 459 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCDC78-206ENST00000463539 KBTBD3Q8NAB2 608 aa23.01■■□□□ 1.27
CCDC78-206ENST00000463539 ANKRD2Q9GZV1 360 aa23■■□□□ 1.27
CCDC78-206ENST00000463539 UQCRFS1P1P0C7P4 283 aa22.99■■□□□ 1.27
CCDC78-206ENST00000463539 PHKA1P46020 1223 aa22.99■■□□□ 1.27
CCDC78-206ENST00000463539 SCARF1Q14162 830 aa22.99■■□□□ 1.27
CCDC78-206ENST00000463539 RBM17Q96I25 401 aaKnown RBP22.99■■□□□ 1.27
CCDC78-206ENST00000463539 BRIP1Q9BX63 1249 aa22.99■■□□□ 1.27
CCDC78-206ENST00000463539 SNRKQ9NRH2 765 aa22.99■■□□□ 1.27
CCDC78-206ENST00000463539 KLRG2A4D1S0 409 aaPredicted RBP22.98■■□□□ 1.27
CCDC78-206ENST00000463539 ARID4AP29374 1257 aaPredicted RBP22.98■■□□□ 1.27
CCDC78-206ENST00000463539 NMIQ13287 307 aaPredicted RBP22.98■■□□□ 1.27
CCDC78-206ENST00000463539 UBE4AQ14139 1066 aa22.98■■□□□ 1.27
CCDC78-206ENST00000463539 TICAM2Q86XR7 235 aa22.98■■□□□ 1.27
CCDC78-206ENST00000463539 ARAP2Q8WZ64 1704 aa22.98■■□□□ 1.27
CCDC78-206ENST00000463539 RAD50Q92878 1312 aa22.98■■□□□ 1.27
CCDC78-206ENST00000463539 MCAMP43121 646 aa22.98■■□□□ 1.27
CCDC78-206ENST00000463539 FAM227BQ96M60 508 aa22.98■■□□□ 1.27
CCDC78-206ENST00000463539 EPB41L2O43491 1005 aaKnown RBP22.97■■□□□ 1.27
CCDC78-206ENST00000463539 KIAA1211Q6ZU35 1233 aa22.97■■□□□ 1.27
CCDC78-206ENST00000463539 TAF1P21675 1872 aa22.97■■□□□ 1.27
CCDC78-206ENST00000463539 NRXN2Q9P2S2 1712 aa22.97■■□□□ 1.27
CCDC78-206ENST00000463539 HOXA10P31260 410 aaPredicted RBP22.96■■□□□ 1.27
CCDC78-206ENST00000463539 KCNJ4P48050 445 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms