RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 HCLS1P14317 486 aaPredicted RBP14.76□□□□□ -0.05
NUP58-206ENST00000463407 FERMT2Q96AC1 680 aa14.76□□□□□ -0.05
NUP58-206ENST00000463407 COL17A1Q9UMD9 1497 aaPredicted RBP14.76□□□□□ -0.05
NUP58-206ENST00000463407 GNAQP50148 359 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 ERMNQ8TAM6 284 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 BRF1Q92994 677 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 CCDC87Q9NVE4 849 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 EDC4Q6P2E9 1401 aaKnown RBP14.75□□□□□ -0.05
NUP58-206ENST00000463407 RNF113AO15541 343 aaKnown RBP14.75□□□□□ -0.05
NUP58-206ENST00000463407 TNPO1Q92973 898 aaKnown RBP14.75□□□□□ -0.05
NUP58-206ENST00000463407 ZNF408Q9H9D4 720 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 TFIP11Q9UBB9 837 aaKnown RBP14.75□□□□□ -0.05
NUP58-206ENST00000463407 NAPAP54920 295 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 AXDND1Q5T1B0 1012 aaPredicted RBP14.75□□□□□ -0.05
NUP58-206ENST00000463407 TCERG1LQ5VWI1 586 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 VPS36Q86VN1 386 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 CCDC148Q8NFR7 591 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 PLBD2Q8NHP8 589 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 CETN1Q12798 172 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 PIK3C2GO75747 1445 aa14.75□□□□□ -0.05
NUP58-206ENST00000463407 TBCAO75347 108 aaKnown RBP14.75□□□□□ -0.05
NUP58-206ENST00000463407 CTAGE5O15320 804 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 NMIQ13287 307 aaPredicted RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 CCDC40Q4G0X9 1142 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 SLC52A2Q9HAB3 445 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 DENND2AQ9ULE3 1009 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 PCDHB15Q9Y5E8 787 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 RBM8AQ9Y5S9 174 aaKnown RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 NBPF7P0C2Y1 421 aaPredicted RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 ITGA6P23229 1130 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 IQCEQ6IPM2 695 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 DDX21Q9NR30 783 aaKnown RBP eCLIP14.74□□□□□ -0.05
NUP58-206ENST00000463407 GGA1Q9UJY5 639 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 PPM1FP49593 454 aaPredicted RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 EIF6P56537 245 aaKnown RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 TMEM2Q9UHN6 1383 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 B4DLN1 442 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 PRKCSHP14314 528 aaPredicted RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 MRPL12P52815 198 aaKnown RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 ARHGAP29Q52LW3 1261 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 SAP30BPQ9UHR5 308 aaKnown RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 MTIF2P46199 727 aaKnown RBP14.74□□□□□ -0.05
NUP58-206ENST00000463407 LRRC27Q9C0I9 530 aa14.74□□□□□ -0.05
NUP58-206ENST00000463407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.73□□□□□ -0.05
NUP58-206ENST00000463407 VAMP4O75379 141 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 PYM1Q9BRP8 204 aaKnown RBP14.73□□□□□ -0.05
NUP58-206ENST00000463407 ALG1Q9BT22 464 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 CFAP74Q9C0B2 1584 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 CALM1P0DP23 149 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 CALM2P0DP24 149 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 CALM3P0DP25 149 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 SBNO2Q9Y2G9 1366 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 USP8P40818 1118 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 RRP36Q96EU6 259 aaKnown RBP14.73□□□□□ -0.05
NUP58-206ENST00000463407 BIN2Q9UBW5 565 aaPredicted RBP14.73□□□□□ -0.05
NUP58-206ENST00000463407 NEO1Q92859 1461 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 ESYT1Q9BSJ8 1104 aa14.73□□□□□ -0.05
NUP58-206ENST00000463407 Q6ZUG5 572 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 CCDC24Q8N4L8 307 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 GDPD2Q9HCC8 539 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 NECAB1Q8N987 351 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 LGR6Q9HBX8 967 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 PDE8AO60658 829 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 DPP8Q6V1X1 898 aaPredicted RBP14.72□□□□□ -0.05
NUP58-206ENST00000463407 HIBADHP31937 336 aaKnown RBP14.72□□□□□ -0.05
NUP58-206ENST00000463407 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 PUF60Q9UHX1 559 aaKnown RBP14.72□□□□□ -0.05
NUP58-206ENST00000463407 SH3TC1Q8TE82 1336 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 A1BGP04217 495 aa14.72□□□□□ -0.05
NUP58-206ENST00000463407 NUP88Q99567 741 aaPredicted RBP14.72□□□□□ -0.05
NUP58-206ENST00000463407 CENPHQ9H3R5 247 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 CEP85Q6P2H3 762 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 METTL22Q9BUU2 404 aaPredicted RBP14.71□□□□□ -0.05
NUP58-206ENST00000463407 MMRN2Q9H8L6 949 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 TNNQ9UQP3 1299 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 BIN1O00499 593 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 PRC1O43663 620 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 MTERF4Q7Z6M4 381 aaKnown RBP14.71□□□□□ -0.05
NUP58-206ENST00000463407 TCEANC2Q96MN5 208 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 PICK1Q9NRD5 415 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 DDX19AQ9NUU7 478 aaKnown RBP14.71□□□□□ -0.05
NUP58-206ENST00000463407 SPDYE3A6NKU9 549 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 TOP1P11387 765 aaKnown RBP14.71□□□□□ -0.05
NUP58-206ENST00000463407 GBP2P32456 591 aaPredicted RBP14.71□□□□□ -0.05
NUP58-206ENST00000463407 ANAPC15P60006 121 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 RAB3GAP1Q15042 981 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 TDRD12Q587J7 1177 aaKnown RBP14.71□□□□□ -0.05
NUP58-206ENST00000463407 TBC1D32Q96NH3 1257 aa14.71□□□□□ -0.05
NUP58-206ENST00000463407 RTL9Q8NET4 1388 aa14.71□□□□□ -0.06
NUP58-206ENST00000463407 TEX11Q8IYF3 940 aa14.71□□□□□ -0.06
NUP58-206ENST00000463407 EXOC1Q9NV70 894 aa14.71□□□□□ -0.06
NUP58-206ENST00000463407 IL13P35225 146 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 RBM25P49756 843 aaKnown RBP14.7□□□□□ -0.06
NUP58-206ENST00000463407 ZRSR2Q15696 482 aaKnown RBP14.7□□□□□ -0.06
NUP58-206ENST00000463407 C6orf50Q9HD87 102 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 ADGRL2O95490 1459 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 ERLIN1O75477 346 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 SFPQP23246 707 aaKnown RBP eCLIP14.7□□□□□ -0.06
NUP58-206ENST00000463407 LTKP29376 864 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 TTC41PQ6P2S7 1318 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms