RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 SPDYE5A6NIY4 337 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 ADCY5O95622 1261 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 SPDYE6P0CI01 402 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
SHQ1-203ENST00000463369 TAF7Q15545 349 aaPredicted RBP10.36□□□□□ -0.75
SHQ1-203ENST00000463369 SPDYE2Q495Y8 402 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 SH3D19Q5HYK7 790 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 MBIPQ9NS73 344 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 VGLL3A8MV65 326 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 PROCA1Q8NCQ7 364 aaPredicted RBP10.35□□□□□ -0.75
SHQ1-203ENST00000463369 KIAA1524Q8TCG1 905 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 DDX54Q8TDD1 881 aaKnown RBP10.35□□□□□ -0.75
SHQ1-203ENST00000463369 QTRT2Q9H974 415 aaKnown RBP10.35□□□□□ -0.75
SHQ1-203ENST00000463369 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 USP25Q9UHP3 1055 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 UBR2Q8IWV8 1755 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 SLFN14P0C7P3 912 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 DDB1Q16531 1140 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
SHQ1-203ENST00000463369 LARGE2Q8N3Y3 721 aa10.35□□□□□ -0.75
SHQ1-203ENST00000463369 GNEQ9Y223 722 aaKnown RBP10.35□□□□□ -0.75
SHQ1-203ENST00000463369 TMEM88BA6NKF7 163 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 TEFQ10587 303 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 PAPPAQ13219 1627 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 SYCP1Q15431 976 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 INTS3Q68E01 1043 aaKnown RBP10.34□□□□□ -0.75
SHQ1-203ENST00000463369 PLEKHM2Q8IWE5 1019 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 SIRT2Q8IXJ6 389 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
SHQ1-203ENST00000463369 FOXD4Q12950 439 aaPredicted RBP10.34□□□□□ -0.75
SHQ1-203ENST00000463369 ZNF772Q68DY9 489 aaPredicted RBP10.34□□□□□ -0.75
SHQ1-203ENST00000463369 SLC52A2Q9HAB3 445 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 CTNNA3Q9UI47 895 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 KCNG1Q9UIX4 513 aa10.34□□□□□ -0.75
SHQ1-203ENST00000463369 ERVV-2B6SEH9 535 aa10.33□□□□□ -0.76
SHQ1-203ENST00000463369 IRF6O14896 467 aa10.33□□□□□ -0.76
SHQ1-203ENST00000463369 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
SHQ1-203ENST00000463369 MIS18AQ9NYP9 233 aa10.33□□□□□ -0.76
SHQ1-203ENST00000463369 TSPYL4Q9UJ04 414 aa10.33□□□□□ -0.76
SHQ1-203ENST00000463369 TPM3P06753 285 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 KCNJ4P48050 445 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 SLC20A2Q08357 652 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 DDX41Q9UJV9 622 aaKnown RBP10.32□□□□□ -0.76
SHQ1-203ENST00000463369 CCDC66A2RUB6 948 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 BTBD11A6QL63 1104 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 NCBP1Q09161 790 aaKnown RBP10.32□□□□□ -0.76
SHQ1-203ENST00000463369 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
SHQ1-203ENST00000463369 PMM1Q92871 262 aa10.32□□□□□ -0.76
SHQ1-203ENST00000463369 SECISBP2LQ93073 1101 aaKnown RBP10.32□□□□□ -0.76
SHQ1-203ENST00000463369 MORC2Q9Y6X9 1032 aaPredicted RBP10.32□□□□□ -0.76
SHQ1-203ENST00000463369 GADD45BO75293 160 aaPredicted RBP10.31□□□□□ -0.76
SHQ1-203ENST00000463369 MARCH10Q8NA82 808 aaPredicted RBP10.31□□□□□ -0.76
SHQ1-203ENST00000463369 KCNF1Q9H3M0 494 aa10.31□□□□□ -0.76
SHQ1-203ENST00000463369 PYCARDQ9ULZ3 195 aa10.31□□□□□ -0.76
SHQ1-203ENST00000463369 C5P01031 1676 aa10.31□□□□□ -0.76
SHQ1-203ENST00000463369 CCDC194A0A1B0GVG4 234 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 CREB3O43889 395 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 CABP4P57796 275 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 TERF2Q15554 542 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 ARHGAP45Q92619 1136 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 TMX3Q96JJ7 454 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 MFRPQ9BY79 579 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 LAMB4A4D0S4 1761 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 VAMP4O75379 141 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 MCM2P49736 904 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 CUL4AQ13619 759 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 CCDC183Q5T5S1 534 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 CASC1Q6TDU7 716 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 USP48Q86UV5 1035 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 C8orf58Q8NAV2 365 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 TIGD1Q96MW7 591 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
SHQ1-203ENST00000463369 METTL14Q9HCE5 456 aaKnown RBP10.3□□□□□ -0.76
SHQ1-203ENST00000463369 RPS6KL1Q9Y6S9 549 aa10.3□□□□□ -0.76
SHQ1-203ENST00000463369 REC8O95072 547 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 PAX3P23760 479 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 TWISTNBQ3B726 338 aaPredicted RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 TSPYL6Q8N831 410 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 BTAF1O14981 1849 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 A0A0G2JS52 829 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 KCNQ3O43525 872 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 RECKO95980 971 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 HCLS1P14317 486 aaPredicted RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 MX1P20591 662 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 EIF4A1P60842 406 aaKnown RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 CCDC181Q5TID7 509 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 ZNF790Q6PG37 636 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 INTS4Q96HW7 963 aaKnown RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 UBA5Q9GZZ9 404 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 DCTPP1Q9H773 170 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 RGS17Q9UGC6 210 aaPredicted RBP10.29□□□□□ -0.76
SHQ1-203ENST00000463369 NHSQ6T4R5 1651 aa10.29□□□□□ -0.76
SHQ1-203ENST00000463369 SOS1Q07889 1333 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms