RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 ADGRB2O60241 1585 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 PNPLA6Q8IY17 1366 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 XRCC5P13010 732 aaKnown RBP6.47□□□□□ -1.37
TRA2B-207ENST00000463328 CLK1P49759 484 aaKnown RBP6.47□□□□□ -1.37
TRA2B-207ENST00000463328 CCDC70Q6NSX1 233 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.47□□□□□ -1.37
TRA2B-207ENST00000463328 TMEM87AQ8NBN3 555 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 PRR7Q8TB68 274 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 SMC3Q9UQE7 1217 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 SLIT1O75093 1534 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 CPS1P31327 1500 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 CDC42BPGQ6DT37 1551 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 ARHGAP23Q9P227 1491 aa6.47□□□□□ -1.37
TRA2B-207ENST00000463328 PPP1R12AO14974 1030 aaPredicted RBP6.46□□□□□ -1.37
TRA2B-207ENST00000463328 MCF2L2Q86YR7 1114 aa6.46□□□□□ -1.37
TRA2B-207ENST00000463328 VPS37AQ8NEZ2 397 aa6.46□□□□□ -1.37
TRA2B-207ENST00000463328 PPM1EQ8WY54 764 aa6.46□□□□□ -1.37
TRA2B-207ENST00000463328 A0A1W2PP64 1363 aa6.46□□□□□ -1.37
TRA2B-207ENST00000463328 PIK3R4Q99570 1358 aa6.46□□□□□ -1.37
TRA2B-207ENST00000463328 COL3A1P02461 1466 aaPredicted RBP6.46□□□□□ -1.38
TRA2B-207ENST00000463328 A6NJY4 79 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 CDC27P30260 824 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 MDM2Q00987 491 aaPredicted RBP6.46□□□□□ -1.38
TRA2B-207ENST00000463328 RAPGEF1Q13905 1077 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 ZKSCAN8Q15776 578 aaPredicted RBP6.46□□□□□ -1.38
TRA2B-207ENST00000463328 NFE2L2Q16236 605 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 CDC37Q16543 378 aaPredicted RBP6.46□□□□□ -1.38
TRA2B-207ENST00000463328 Q3C1V9 767 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 RELL1Q8IUW5 271 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 FBXO22Q8NEZ5 403 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 CD248Q9HCU0 757 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 APAF1O14727 1248 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 FAM160A1Q05DH4 1040 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 VPS72Q15906 364 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 TMEM95Q3KNT9 176 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 SAMD3Q8N6K7 520 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 CCDC89Q8N998 374 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 PRPF38AQ8NAV1 312 aaKnown RBP6.46□□□□□ -1.38
TRA2B-207ENST00000463328 NELL1Q92832 810 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 CCDC47Q96A33 483 aaKnown RBP6.46□□□□□ -1.38
TRA2B-207ENST00000463328 CDK19Q9BWU1 502 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 IP6K2Q9UHH9 426 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 ANAPC4Q9UJX5 808 aa6.46□□□□□ -1.38
TRA2B-207ENST00000463328 CPSF1Q10570 1443 aaKnown RBP6.45□□□□□ -1.38
TRA2B-207ENST00000463328 DIP2AQ14689 1571 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 NPHP1O15259 732 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 SLC26A4O43511 780 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 SSR1P43307 286 aaKnown RBP6.45□□□□□ -1.38
TRA2B-207ENST00000463328 E2F5Q15329 346 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 TMEM259Q4ZIN3 620 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
TRA2B-207ENST00000463328 RNF217Q8TC41 542 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 PNNQ9H307 717 aaKnown RBP6.45□□□□□ -1.38
TRA2B-207ENST00000463328 CABP2Q9NPB3 220 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 ASAP1Q9ULH1 1129 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 MRPS23Q9Y3D9 190 aaKnown RBP6.45□□□□□ -1.38
TRA2B-207ENST00000463328 WASLO00401 505 aaPredicted RBP6.45□□□□□ -1.38
TRA2B-207ENST00000463328 FYB1O15117 783 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 MTHFSP49914 203 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 GJD4Q96KN9 370 aaPredicted RBP6.45□□□□□ -1.38
TRA2B-207ENST00000463328 EMILIN3Q9NT22 766 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 AKAP12Q02952 1782 aa6.45□□□□□ -1.38
TRA2B-207ENST00000463328 MON2Q7Z3U7 1717 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 K7ELQ4 463 aaPredicted RBP6.44□□□□□ -1.38
TRA2B-207ENST00000463328 U2AF1L5P0DN76 240 aaPredicted RBP6.44□□□□□ -1.38
TRA2B-207ENST00000463328 CDKN1CP49918 316 aaPredicted RBP6.44□□□□□ -1.38
TRA2B-207ENST00000463328 U2AF1Q01081 240 aaKnown RBP eCLIP6.44□□□□□ -1.38
TRA2B-207ENST00000463328 WASHC5Q12768 1159 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 PDE3AQ14432 1141 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 PPP2R2DQ66LE6 453 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 CHCHD4Q8N4Q1 142 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 MYRIPQ8NFW9 859 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 EXOC6Q8TAG9 804 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 DNAJC25Q9H1X3 360 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 C12orf49Q9H741 205 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 POLG2Q9UHN1 485 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 IL16Q14005 1332 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 LILRB3O75022 631 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 ATICP31939 592 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 TRAPPC10P48553 1259 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 C14orf80Q86SX3 495 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 JAMLQ86YT9 394 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 ACRBPQ8NEB7 543 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 NLRP7Q8WX94 980 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 TYW1Q9NV66 732 aaKnown RBP6.44□□□□□ -1.38
TRA2B-207ENST00000463328 RAI14Q9P0K7 980 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 MRVI1Q9Y6F6 885 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 FER1L4A9Z1Z3 1794 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 C3P01024 1663 aa6.44□□□□□ -1.38
TRA2B-207ENST00000463328 ADAMTS13Q76LX8 1427 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 METP08581 1390 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 AATKQ6ZMQ8 1374 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 ZNF211Q13398 564 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-207ENST00000463328 HIC1Q14526 733 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 BRD3Q15059 726 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 PDIA6Q15084 440 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 ECM1Q16610 540 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 PLEKHG4Q58EX7 1191 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 ALKBH2Q6NS38 261 aa6.43□□□□□ -1.38
TRA2B-207ENST00000463328 ERAP2Q6P179 960 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms