RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
HDAC6-213ENST00000462730 HSPA4P34932 840 aa17.49■□□□□ 0.39
HDAC6-213ENST00000462730 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
HDAC6-213ENST00000462730 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
HDAC6-213ENST00000462730 RFC4P35249 363 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 TIMM10P62072 90 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 DNAJC2Q99543 621 aaKnown RBP17.48■□□□□ 0.39
HDAC6-213ENST00000462730 HAUS7Q99871 368 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
HDAC6-213ENST00000462730 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 POTEAQ6S8J7 498 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 IL17RAQ96F46 866 aa17.48■□□□□ 0.39
HDAC6-213ENST00000462730 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.47■□□□□ 0.39
HDAC6-213ENST00000462730 A0A1B0GUL7 405 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 ADRA2BP18089 450 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 DDIT3P35638 169 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 LDHAL6AQ6ZMR3 332 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
HDAC6-213ENST00000462730 NEK4P51957 841 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 PROM2Q8N271 834 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 ABCC12Q96J65 1359 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 A0A0D9SFI3 127 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 PTH1RQ03431 593 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 AKAP2Q9Y2D5 859 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 RIPOR2Q9Y4F9 1068 aa17.46■□□□□ 0.39
HDAC6-213ENST00000462730 RFX7Q2KHR2 1363 aa17.46■□□□□ 0.38
HDAC6-213ENST00000462730 RTL9Q8NET4 1388 aa17.46■□□□□ 0.38
HDAC6-213ENST00000462730 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
HDAC6-213ENST00000462730 CCDC171Q6TFL3 1326 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 APBA3O96018 575 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 CIZ1Q9ULV3 898 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-213ENST00000462730 SNX14Q9Y5W7 946 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 COL4A1P02462 1669 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 PLSCR1O15162 318 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 SSFA2P28290 1259 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-213ENST00000462730 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
HDAC6-213ENST00000462730 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-213ENST00000462730 SNRKQ9NRH2 765 aa17.44■□□□□ 0.38
HDAC6-213ENST00000462730 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
HDAC6-213ENST00000462730 ADORA1P30542 326 aa17.43■□□□□ 0.38
HDAC6-213ENST00000462730 C3orf67Q6ZVT6 689 aa17.43■□□□□ 0.38
HDAC6-213ENST00000462730 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-213ENST00000462730 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
HDAC6-213ENST00000462730 CARMIL3Q8ND23 1372 aa17.43■□□□□ 0.38
HDAC6-213ENST00000462730 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
HDAC6-213ENST00000462730 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
HDAC6-213ENST00000462730 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
HDAC6-213ENST00000462730 PAG1Q9NWQ8 432 aa17.42■□□□□ 0.38
HDAC6-213ENST00000462730 GOLIM4O00461 696 aa17.42■□□□□ 0.38
HDAC6-213ENST00000462730 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
HDAC6-213ENST00000462730 XAGE2Q96GT9 111 aa17.42■□□□□ 0.38
HDAC6-213ENST00000462730 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
HDAC6-213ENST00000462730 TNRC6CQ9HCJ0 1690 aaKnown RBP17.42■□□□□ 0.38
HDAC6-213ENST00000462730 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
HDAC6-213ENST00000462730 MCM2P49736 904 aa17.41■□□□□ 0.38
HDAC6-213ENST00000462730 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
HDAC6-213ENST00000462730 TTC39AQ5SRH9 613 aa17.41■□□□□ 0.38
HDAC6-213ENST00000462730 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
HDAC6-213ENST00000462730 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
HDAC6-213ENST00000462730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
HDAC6-213ENST00000462730 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
HDAC6-213ENST00000462730 NFIXQ14938 502 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 CCDC158Q5M9N0 1113 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 SLC10A5Q5PT55 438 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-213ENST00000462730 RBM8AQ9Y5S9 174 aaKnown RBP17.4■□□□□ 0.38
HDAC6-213ENST00000462730 MROH5Q6ZUA9 1318 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 GYS1P13807 737 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
HDAC6-213ENST00000462730 IGHMBP2P38935 993 aaKnown RBP17.4■□□□□ 0.38
HDAC6-213ENST00000462730 KCNJ4P48050 445 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
HDAC6-213ENST00000462730 ZNF827Q17R98 1081 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 TAF1P21675 1872 aa17.4■□□□□ 0.38
HDAC6-213ENST00000462730 PDE8BO95263 885 aa17.39■□□□□ 0.37
HDAC6-213ENST00000462730 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
HDAC6-213ENST00000462730 MAP4K1Q92918 833 aa17.39■□□□□ 0.37
HDAC6-213ENST00000462730 A0A1B0GUL6 1792 aa17.39■□□□□ 0.37
HDAC6-213ENST00000462730 NOL8Q76FK4 1167 aaKnown RBP17.39■□□□□ 0.37
HDAC6-213ENST00000462730 KCNB2Q92953 911 aa17.39■□□□□ 0.37
HDAC6-213ENST00000462730 CDC5LQ99459 802 aaKnown RBP17.39■□□□□ 0.37
HDAC6-213ENST00000462730 NPHP1O15259 732 aa17.38■□□□□ 0.37
HDAC6-213ENST00000462730 CHGBP05060 677 aa17.38■□□□□ 0.37
HDAC6-213ENST00000462730 NECTIN1Q15223 517 aa17.38■□□□□ 0.37
HDAC6-213ENST00000462730 CREB3L3Q68CJ9 461 aa17.38■□□□□ 0.37
HDAC6-213ENST00000462730 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
HDAC6-213ENST00000462730 HELBQ8NG08 1087 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-213ENST00000462730 NLRP3Q96P20 1036 aa17.37■□□□□ 0.37
HDAC6-213ENST00000462730 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms