RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GGA1Q9UJY5 639 aa24.2■■□□□ 1.46
VARS-220ENST00000461874 UFL1O94874 794 aa24.19■■□□□ 1.46
VARS-220ENST00000461874 DOK7Q18PE1 504 aa24.19■■□□□ 1.46
VARS-220ENST00000461874 ZC3H12CQ9C0D7 883 aaKnown RBP24.19■■□□□ 1.46
VARS-220ENST00000461874 GREM2Q9H772 168 aa24.19■■□□□ 1.46
VARS-220ENST00000461874 CNTNAP1P78357 1384 aa24.18■■□□□ 1.46
VARS-220ENST00000461874 RTL9Q8NET4 1388 aa24.18■■□□□ 1.46
VARS-220ENST00000461874 ZNF521Q96K83 1311 aa24.18■■□□□ 1.46
VARS-220ENST00000461874 PSMD14O00487 310 aa24.18■■□□□ 1.46
VARS-220ENST00000461874 ECE2O60344 883 aa24.18■■□□□ 1.46
VARS-220ENST00000461874 PLA2G12BQ9BX93 195 aa24.18■■□□□ 1.46
VARS-220ENST00000461874 CNOT7Q9UIV1 285 aaKnown RBP24.18■■□□□ 1.46
VARS-220ENST00000461874 CASP7P55210 303 aa24.17■■□□□ 1.46
VARS-220ENST00000461874 DPF2Q92785 391 aa24.17■■□□□ 1.46
VARS-220ENST00000461874 KCNQ5Q9NR82 932 aa24.17■■□□□ 1.46
VARS-220ENST00000461874 ZBTB12Q9Y330 459 aaPredicted RBP24.17■■□□□ 1.46
VARS-220ENST00000461874 XDHP47989 1333 aa24.16■■□□□ 1.46
VARS-220ENST00000461874 BSDC1Q9NW68 430 aaPredicted RBP24.16■■□□□ 1.46
VARS-220ENST00000461874 PGAP2Q9UHJ9 254 aa24.16■■□□□ 1.46
VARS-220ENST00000461874 CACNA1FO60840 1977 aa24.15■■□□□ 1.46
VARS-220ENST00000461874 SHTN1A0MZ66 631 aa24.15■■□□□ 1.46
VARS-220ENST00000461874 F6X3S4 739 aa24.15■■□□□ 1.46
VARS-220ENST00000461874 H7C1D1 291 aa24.15■■□□□ 1.46
VARS-220ENST00000461874 HIRAP54198 1017 aaPredicted RBP24.15■■□□□ 1.46
VARS-220ENST00000461874 MICALL2Q8IY33 904 aa24.15■■□□□ 1.46
VARS-220ENST00000461874 ATP2B4P23634 1241 aa24.14■■□□□ 1.45
VARS-220ENST00000461874 FMR1Q06787 632 aaKnown RBP eCLIP24.14■■□□□ 1.451e-8■■■■■ 29.9
VARS-220ENST00000461874 TRPM4Q8TD43 1214 aa24.14■■□□□ 1.45
VARS-220ENST00000461874 ZC3H15Q8WU90 426 aaKnown RBP24.14■■□□□ 1.45
VARS-220ENST00000461874 MINPP1Q9UNW1 487 aa24.14■■□□□ 1.45
VARS-220ENST00000461874 TRAF5O00463 557 aa24.13■■□□□ 1.45
VARS-220ENST00000461874 CSF1RP07333 972 aa24.13■■□□□ 1.45
VARS-220ENST00000461874 RPS12P25398 132 aaKnown RBP24.13■■□□□ 1.45
VARS-220ENST00000461874 BEND3Q5T5X7 828 aa24.13■■□□□ 1.45
VARS-220ENST00000461874 IFFO2Q5TF58 517 aa24.13■■□□□ 1.45
VARS-220ENST00000461874 RASSF10A6NK89 507 aa24.12■■□□□ 1.45
VARS-220ENST00000461874 G3V3G9 751 aa24.12■■□□□ 1.45
VARS-220ENST00000461874 HSPA1AP0DMV8 641 aaKnown RBP24.12■■□□□ 1.45
VARS-220ENST00000461874 HSPA1BP0DMV9 641 aaKnown RBP24.12■■□□□ 1.45
VARS-220ENST00000461874 VEGFBP49765 207 aa24.12■■□□□ 1.45
VARS-220ENST00000461874 DCAF8Q5TAQ9 597 aa24.12■■□□□ 1.45
VARS-220ENST00000461874 VIL1P09327 827 aaKnown RBP24.11■■□□□ 1.45
VARS-220ENST00000461874 WTIPA6NIX2 430 aaPredicted RBP24.1■■□□□ 1.45
VARS-220ENST00000461874 ITGA6P23229 1130 aa24.1■■□□□ 1.45
VARS-220ENST00000461874 IGHMBP2P38935 993 aaKnown RBP24.1■■□□□ 1.45
VARS-220ENST00000461874 DEFB115Q30KQ5 88 aa24.1■■□□□ 1.45
VARS-220ENST00000461874 FAM161AQ3B820 660 aa24.1■■□□□ 1.45
VARS-220ENST00000461874 CST9Q5W186 159 aa24.1■■□□□ 1.45
VARS-220ENST00000461874 ABT1Q9ULW3 272 aaKnown RBP24.1■■□□□ 1.45
VARS-220ENST00000461874 SAMD7Q7Z3H4 446 aa24.09■■□□□ 1.45
VARS-220ENST00000461874 GLIS2Q9BZE0 524 aaPredicted RBP24.09■■□□□ 1.45
VARS-220ENST00000461874 MYH3P11055 1940 aa24.08■■□□□ 1.45
VARS-220ENST00000461874 CCT4P50991 539 aaKnown RBP24.08■■□□□ 1.45
VARS-220ENST00000461874 TBC1D10BQ4KMP7 808 aaPredicted RBP24.07■■□□□ 1.44
VARS-220ENST00000461874 CDC37L1Q7L3B6 337 aa24.07■■□□□ 1.44
VARS-220ENST00000461874 PODNQ7Z5L7 613 aa24.07■■□□□ 1.44
VARS-220ENST00000461874 MED23Q9ULK4 1368 aa24.06■■□□□ 1.44
VARS-220ENST00000461874 E9PSI1 815 aa24.06■■□□□ 1.44
VARS-220ENST00000461874 EGFRP00533 1210 aa24.06■■□□□ 1.44
VARS-220ENST00000461874 FOXO4P98177 505 aa24.06■■□□□ 1.44
VARS-220ENST00000461874 COL13A1Q5TAT6 717 aaPredicted RBP24.06■■□□□ 1.44
VARS-220ENST00000461874 MPHOSPH8Q99549 860 aa24.06■■□□□ 1.44
VARS-220ENST00000461874 SCN9AQ15858 1988 aa24.05■■□□□ 1.44
VARS-220ENST00000461874 RSBN1LQ6PCB5 846 aaPredicted RBP24.05■■□□□ 1.44
VARS-220ENST00000461874 ANKRD2Q9GZV1 360 aa24.05■■□□□ 1.44
VARS-220ENST00000461874 LEMD3Q9Y2U8 911 aa24.05■■□□□ 1.44
VARS-220ENST00000461874 ANKRD18BA2A2Z9 1011 aa24.04■■□□□ 1.44
VARS-220ENST00000461874 GRM8O00222 908 aa24.04■■□□□ 1.44
VARS-220ENST00000461874 ALDH1L1O75891 902 aa24.04■■□□□ 1.44
VARS-220ENST00000461874 CELF2O95319 508 aaKnown RBP24.04■■□□□ 1.44
VARS-220ENST00000461874 RBM26Q5T8P6 1007 aaKnown RBP24.04■■□□□ 1.44
VARS-220ENST00000461874 AGBL3Q8NEM8 1001 aa24.04■■□□□ 1.44
VARS-220ENST00000461874 TLL2Q9Y6L7 1015 aa24.04■■□□□ 1.44
VARS-220ENST00000461874 ZNF609O15014 1411 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 USP17L3A6NCW0 530 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 USP17L4A6NCW7 530 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 SLFN5Q08AF3 891 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 SLC4A10Q6U841 1118 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 USP17L1Q7RTZ2 530 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 USP48Q86UV5 1035 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 SRCIN1Q9C0H9 1055 aa24.03■■□□□ 1.44
VARS-220ENST00000461874 WDR33Q9C0J8 1336 aaKnown RBP24.03■■□□□ 1.44
VARS-220ENST00000461874 ZNF280AP59817 542 aaPredicted RBP24.02■■□□□ 1.44
VARS-220ENST00000461874 IFIT5Q13325 482 aaKnown RBP24.02■■□□□ 1.44
VARS-220ENST00000461874 KIF4BQ2VIQ3 1234 aa24.02■■□□□ 1.44
VARS-220ENST00000461874 EPHA10Q5JZY3 1008 aa24.02■■□□□ 1.44
VARS-220ENST00000461874 MRPL50Q8N5N7 158 aaKnown RBP24.02■■□□□ 1.44
VARS-220ENST00000461874 GMLQ99445 158 aa24.02■■□□□ 1.44
VARS-220ENST00000461874 C9orf78Q9NZ63 289 aaPredicted RBP24.02■■□□□ 1.44
VARS-220ENST00000461874 ZNF804BA4D1E1 1349 aa24.02■■□□□ 1.44
VARS-220ENST00000461874 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
VARS-220ENST00000461874 CHRNDQ07001 517 aa24.01■■□□□ 1.43
VARS-220ENST00000461874 LMBR1LQ6UX01 489 aa24.01■■□□□ 1.43
VARS-220ENST00000461874 TXNRD3Q86VQ6 643 aa24.01■■□□□ 1.43
VARS-220ENST00000461874 COA1Q9GZY4 146 aa24.01■■□□□ 1.43
VARS-220ENST00000461874 CHMP3Q9Y3E7 222 aa24.01■■□□□ 1.43
VARS-220ENST00000461874 SAPCD2Q86UD0 394 aa24■■□□□ 1.43
VARS-220ENST00000461874 CAPNS2Q96L46 248 aa24■■□□□ 1.43
VARS-220ENST00000461874 WBP1LQ9NX94 342 aa24■■□□□ 1.43
VARS-220ENST00000461874 TRPM7Q96QT4 1865 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms