RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 GMPSP49915 693 aaPredicted RBP17.56■□□□□ 0.4
RBM39-222ENST00000461849 TBC1D16Q8TBP0 767 aa17.56■□□□□ 0.4
RBM39-222ENST00000461849 DBNDD1Q9H9R9 158 aa17.56■□□□□ 0.4
RBM39-222ENST00000461849 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
RBM39-222ENST00000461849 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
RBM39-222ENST00000461849 UFL1O94874 794 aa17.55■□□□□ 0.4
RBM39-222ENST00000461849 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
RBM39-222ENST00000461849 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
RBM39-222ENST00000461849 MKRN1Q9UHC7 482 aaKnown RBP17.55■□□□□ 0.4
RBM39-222ENST00000461849 ADAMTSL1Q8N6G6 1762 aa17.55■□□□□ 0.4
RBM39-222ENST00000461849 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
RBM39-222ENST00000461849 CACNA1FO60840 1977 aa17.55■□□□□ 0.4
RBM39-222ENST00000461849 YDJCA8MPS7 323 aa17.54■□□□□ 0.4
RBM39-222ENST00000461849 GCKRQ14397 625 aa17.54■□□□□ 0.4
RBM39-222ENST00000461849 LINS1Q8NG48 757 aa17.54■□□□□ 0.4
RBM39-222ENST00000461849 TTLL11Q8NHH1 800 aa17.54■□□□□ 0.4
RBM39-222ENST00000461849 COL4A1P02462 1669 aa17.53■□□□□ 0.4
RBM39-222ENST00000461849 H7C1D1 291 aa17.53■□□□□ 0.4
RBM39-222ENST00000461849 H7C1W4 665 aa17.53■□□□□ 0.4
RBM39-222ENST00000461849 ECE2O60344 883 aa17.53■□□□□ 0.4
RBM39-222ENST00000461849 DOK7Q18PE1 504 aa17.53■□□□□ 0.4
RBM39-222ENST00000461849 GREM2Q9H772 168 aa17.53■□□□□ 0.4
RBM39-222ENST00000461849 XDHP47989 1333 aa17.52■□□□□ 0.4
RBM39-222ENST00000461849 PSMD14O00487 310 aa17.52■□□□□ 0.4
RBM39-222ENST00000461849 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
RBM39-222ENST00000461849 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
RBM39-222ENST00000461849 CNOT7Q9UIV1 285 aaKnown RBP17.52■□□□□ 0.4
RBM39-222ENST00000461849 MYH3P11055 1940 aa17.51■□□□□ 0.39
RBM39-222ENST00000461849 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
RBM39-222ENST00000461849 BSDC1Q9NW68 430 aaPredicted RBP17.51■□□□□ 0.39
RBM39-222ENST00000461849 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
RBM39-222ENST00000461849 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
RBM39-222ENST00000461849 DPF2Q92785 391 aa17.5■□□□□ 0.39
RBM39-222ENST00000461849 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
RBM39-222ENST00000461849 PLA2G12BQ9BX93 195 aa17.5■□□□□ 0.39
RBM39-222ENST00000461849 ABT1Q9ULW3 272 aaKnown RBP17.5■□□□□ 0.39
RBM39-222ENST00000461849 CNTNAP1P78357 1384 aa17.5■□□□□ 0.39
RBM39-222ENST00000461849 RTL9Q8NET4 1388 aa17.5■□□□□ 0.39
RBM39-222ENST00000461849 F6X3S4 739 aa17.49■□□□□ 0.39
RBM39-222ENST00000461849 RPS12P25398 132 aaKnown RBP17.49■□□□□ 0.39
RBM39-222ENST00000461849 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
RBM39-222ENST00000461849 ITGA6P23229 1130 aa17.48■□□□□ 0.39
RBM39-222ENST00000461849 DEFB115Q30KQ5 88 aa17.48■□□□□ 0.39
RBM39-222ENST00000461849 ZC3H15Q8WU90 426 aaKnown RBP17.48■□□□□ 0.39
RBM39-222ENST00000461849 MINPP1Q9UNW1 487 aa17.48■□□□□ 0.39
RBM39-222ENST00000461849 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
RBM39-222ENST00000461849 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
RBM39-222ENST00000461849 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
RBM39-222ENST00000461849 BEND3Q5T5X7 828 aa17.47■□□□□ 0.39
RBM39-222ENST00000461849 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
RBM39-222ENST00000461849 KCNQ5Q9NR82 932 aa17.47■□□□□ 0.39
RBM39-222ENST00000461849 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
RBM39-222ENST00000461849 ANKRD18BA2A2Z9 1011 aa17.46■□□□□ 0.39
RBM39-222ENST00000461849 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
RBM39-222ENST00000461849 BRPF1P55201 1214 aaPredicted RBP17.46■□□□□ 0.39
RBM39-222ENST00000461849 CASP7P55210 303 aa17.46■□□□□ 0.39
RBM39-222ENST00000461849 PODNQ7Z5L7 613 aa17.46■□□□□ 0.39
RBM39-222ENST00000461849 TRPM4Q8TD43 1214 aa17.46■□□□□ 0.39
RBM39-222ENST00000461849 ANKRD2Q9GZV1 360 aa17.46■□□□□ 0.39
RBM39-222ENST00000461849 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
RBM39-222ENST00000461849 SPEF2Q9C093 1822 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 TRAF5O00463 557 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 CSF1RP07333 972 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
RBM39-222ENST00000461849 VEGFBP49765 207 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 RARSP54136 660 aaKnown RBP17.45■□□□□ 0.38
RBM39-222ENST00000461849 HIRAP54198 1017 aaPredicted RBP17.45■□□□□ 0.38
RBM39-222ENST00000461849 RBM26Q5T8P6 1007 aaKnown RBP17.45■□□□□ 0.38
RBM39-222ENST00000461849 PAXIP1Q6ZW49 1069 aaPredicted RBP17.45■□□□□ 0.38
RBM39-222ENST00000461849 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 SAMD7Q7Z3H4 446 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 PGAP2Q9UHJ9 254 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 LEMD3Q9Y2U8 911 aa17.45■□□□□ 0.38
RBM39-222ENST00000461849 MED23Q9ULK4 1368 aa17.44■□□□□ 0.38
RBM39-222ENST00000461849 KCNJ4P48050 445 aa17.44■□□□□ 0.38
RBM39-222ENST00000461849 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
RBM39-222ENST00000461849 IFIT5Q13325 482 aaKnown RBP17.44■□□□□ 0.38
RBM39-222ENST00000461849 TBC1D10BQ4KMP7 808 aaPredicted RBP17.44■□□□□ 0.38
RBM39-222ENST00000461849 GLIS2Q9BZE0 524 aaPredicted RBP17.44■□□□□ 0.38
RBM39-222ENST00000461849 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
RBM39-222ENST00000461849 GRM8O00222 908 aa17.43■□□□□ 0.38
RBM39-222ENST00000461849 ALDH1L1O75891 902 aa17.43■□□□□ 0.38
RBM39-222ENST00000461849 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
RBM39-222ENST00000461849 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
RBM39-222ENST00000461849 RSBN1LQ6PCB5 846 aaPredicted RBP17.43■□□□□ 0.38
RBM39-222ENST00000461849 AGBL3Q8NEM8 1001 aa17.43■□□□□ 0.38
RBM39-222ENST00000461849 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
RBM39-222ENST00000461849 ZNF408Q9H9D4 720 aa17.43■□□□□ 0.38
RBM39-222ENST00000461849 USP17L3A6NCW0 530 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 USP17L4A6NCW7 530 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 CCDC57Q2TAC2 916 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 CST9Q5W186 159 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 USP17L1Q7RTZ2 530 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
RBM39-222ENST00000461849 DCPSQ96C86 337 aaKnown RBP17.42■□□□□ 0.38
RBM39-222ENST00000461849 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms