RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 ERVV-2B6SEH9 535 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 CABP4P57796 275 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 FAM173BQ6P4H8 233 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 CCDC83Q8IWF9 413 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
NPHP1-209ENST00000461707 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 DBNDD2Q9BQY9 259 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 DIAPH3Q9NSV4 1193 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 ZNF335Q9H4Z2 1342 aaPredicted RBP8.82□□□□□ -1
NPHP1-209ENST00000461707 A0A087WZG4 1122 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 ME3Q16798 604 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
NPHP1-209ENST00000461707 ZBTB3Q9H5J0 574 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 STRN4Q9NRL3 753 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 CNPY2Q9Y2B0 182 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 MORC2Q9Y6X9 1032 aaPredicted RBP8.82□□□□□ -1
NPHP1-209ENST00000461707 CDHR2Q9BYE9 1310 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 SNRPA1P09661 255 aaKnown RBP8.81□□□□□ -1
NPHP1-209ENST00000461707 MCCP23508 829 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 G3BP1Q13283 466 aaKnown RBP eCLIP8.81□□□□□ -1
NPHP1-209ENST00000461707 USP48Q86UV5 1035 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 DCAF5Q96JK2 942 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 TPCN1Q9ULQ1 816 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 RBM8AQ9Y5S9 174 aaKnown RBP8.81□□□□□ -1
NPHP1-209ENST00000461707 PPFIA3O75145 1194 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 SKOR2Q2VWA4 1001 aaPredicted RBP8.81□□□□□ -1
NPHP1-209ENST00000461707 RNF214Q8ND24 703 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 ZSWIM6Q9HCJ5 1215 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 MYH7BA7E2Y1 1941 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 TIMM10P62072 90 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 MAP4K1Q92918 833 aa8.81□□□□□ -1
NPHP1-209ENST00000461707 SYT1P21579 422 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 LRRC24Q50LG9 513 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 CREB3L3Q68CJ9 461 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 MPNDQ8N594 471 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 PUS3Q9BZE2 481 aaKnown RBP8.8□□□□□ -1
NPHP1-209ENST00000461707 DDX58O95786 925 aaKnown RBP8.8□□□□□ -1
NPHP1-209ENST00000461707 NASPP49321 788 aaPredicted RBP8.8□□□□□ -1
NPHP1-209ENST00000461707 DDX46Q7L014 1031 aaKnown RBP8.8□□□□□ -1
NPHP1-209ENST00000461707 SLX4Q8IY92 1834 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 SLC27A2O14975 620 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 FMNL2Q96PY5 1086 aa8.8□□□□□ -1
NPHP1-209ENST00000461707 GOLGA6L22H0YM25 854 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 TNNI3KQ59H18 835 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 VPS53Q5VIR6 699 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 EVI5LQ96CN4 794 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 DNAJC2Q99543 621 aaKnown RBP8.79□□□□□ -1
NPHP1-209ENST00000461707 FSD1Q9BTV5 496 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 PRDM11Q9NQV5 511 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 CHMP3Q9Y3E7 222 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
NPHP1-209ENST00000461707 FPGT-TNNI3KV9GXZ4 949 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 CIAO1O76071 339 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 HSP90AB4PQ58FF6 505 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 KIAA1211Q6ZU35 1233 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 LRRC2Q9BYS8 371 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 STK3Q13188 491 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 CADPS2Q86UW7 1296 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 PDRG1Q9NUG6 133 aa8.79□□□□□ -1
NPHP1-209ENST00000461707 GJB2P29033 226 aa8.78□□□□□ -1
NPHP1-209ENST00000461707 NEXNQ0ZGT2 675 aa8.78□□□□□ -1
NPHP1-209ENST00000461707 LIMCH1Q9UPQ0 1083 aa8.78□□□□□ -1
NPHP1-209ENST00000461707 ASAP1Q9ULH1 1129 aa8.78□□□□□ -1
NPHP1-209ENST00000461707 ADD1P35611 737 aaKnown RBP8.78□□□□□ -1
NPHP1-209ENST00000461707 TOB2Q14106 344 aaPredicted RBP8.78□□□□□ -1
NPHP1-209ENST00000461707 FERMT3Q86UX7 667 aa8.78□□□□□ -1
NPHP1-209ENST00000461707 ZCRB1Q8TBF4 217 aaKnown RBP8.78□□□□□ -1
NPHP1-209ENST00000461707 FBXO3Q9UK99 471 aa8.78□□□□□ -1
NPHP1-209ENST00000461707 TAF5LO75529 589 aa8.77□□□□□ -1
NPHP1-209ENST00000461707 DNM1Q05193 864 aaKnown RBP8.77□□□□□ -1
NPHP1-209ENST00000461707 BAZ2AQ9UIF9 1905 aaKnown RBP8.77□□□□□ -1.01
NPHP1-209ENST00000461707 EIF5BO60841 1220 aaKnown RBP8.77□□□□□ -1.01
NPHP1-209ENST00000461707 MCM2P49736 904 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 STOX1Q6ZVD7 989 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 PCDH11XQ9BZA7 1347 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 PCDH11YQ9BZA8 1340 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 ESPNB1AK53 854 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 STX6O43752 255 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 HSP90AB3PQ58FF7 597 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 ERC1Q8IUD2 1116 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 PLBD2Q8NHP8 589 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 MTMR6Q9Y217 621 aa8.77□□□□□ -1.01
NPHP1-209ENST00000461707 FIBPO43427 364 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 PI16Q6UXB8 463 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 CDC37L1Q7L3B6 337 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 NBPF3Q9H094 633 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 MYH8P13535 1937 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 JAK2O60674 1132 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 ZSCAN22P10073 491 aaPredicted RBP8.76□□□□□ -1.01
NPHP1-209ENST00000461707 NEUROD6Q96NK8 337 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 KCNJ4P48050 445 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 EXOSC10Q01780 885 aaKnown RBP8.76□□□□□ -1.01
NPHP1-209ENST00000461707 CHST3Q7LGC8 479 aa8.76□□□□□ -1.01
NPHP1-209ENST00000461707 SMARCC2Q8TAQ2 1214 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms