RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 HSH2DQ96JZ2 352 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 ZNF587Q96SQ5 575 aaPredicted RBP5.07□□□□□ -1.6
HDAC6-212ENST00000461608 PHACTR1Q9C0D0 580 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 USP21Q9UK80 565 aa5.07□□□□□ -1.6
HDAC6-212ENST00000461608 FAM229AH3BQW9 127 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 DGKZQ13574 1117 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 LAMC2Q13753 1193 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 GRIK4Q16099 956 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 ECM1Q16610 540 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 ZNF280CQ8ND82 737 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 RHPN1Q8TCX5 695 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 ALKBH8Q96BT7 664 aaKnown RBP5.06□□□□□ -1.6
HDAC6-212ENST00000461608 NGLY1Q96IV0 654 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 ANKIB1Q9P2G1 1089 aa5.06□□□□□ -1.6
HDAC6-212ENST00000461608 COL17A1Q9UMD9 1497 aaPredicted RBP5.06□□□□□ -1.6
HDAC6-212ENST00000461608 TGFBR3LH3BV60 316 aa5.05□□□□□ -1.6
HDAC6-212ENST00000461608 AAMPQ13685 434 aa5.05□□□□□ -1.6
HDAC6-212ENST00000461608 FAM129BQ96TA1 746 aa5.05□□□□□ -1.6
HDAC6-212ENST00000461608 SAP130Q9H0E3 1048 aa5.05□□□□□ -1.6
HDAC6-212ENST00000461608 LRFN2Q9ULH4 789 aa5.05□□□□□ -1.6
HDAC6-212ENST00000461608 RNF112Q9ULX5 631 aa5.05□□□□□ -1.6
HDAC6-212ENST00000461608 TREHO43280 583 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 ALBP02768 609 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 NEFLP07196 543 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 VAMP1P23763 118 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 MZF1P28698 734 aaPredicted RBP5.04□□□□□ -1.6
HDAC6-212ENST00000461608 FMR1Q06787 632 aaKnown RBP eCLIP5.04□□□□□ -1.6
HDAC6-212ENST00000461608 FZD5Q13467 585 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 EAPPQ56P03 285 aaPredicted RBP5.04□□□□□ -1.6
HDAC6-212ENST00000461608 TMC7Q7Z402 723 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 GJD3Q8N144 294 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 GIPC2Q8TF65 315 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 HCN4Q9Y3Q4 1203 aa5.04□□□□□ -1.6
HDAC6-212ENST00000461608 FZD6O60353 706 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 EPB42P16452 691 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 ZNF16P17020 682 aaPredicted RBP5.03□□□□□ -1.6
HDAC6-212ENST00000461608 ZAP70P43403 619 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 ATP2B2Q01814 1243 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 ADGRE1Q14246 886 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 FBXO33Q7Z6M2 555 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 TTC16Q8NEE8 873 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 TMC1Q8TDI8 760 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 IFT43Q96FT9 208 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 C11orf16Q9NQ32 467 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 PRDM6Q9NQX0 595 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 RNF114Q9Y508 228 aa5.03□□□□□ -1.6
HDAC6-212ENST00000461608 ADARB2-AS1A8MUL3 147 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 LILRB5O75023 590 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 SIN3BO75182 1162 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 NID1P14543 1247 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 TYRO3Q06418 890 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 SPEM2Q0P670 501 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 MBTPS1Q14703 1052 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 ETFBKMTQ8IXQ9 262 aa5.02□□□□□ -1.61
HDAC6-212ENST00000461608 MRRFQ96E11 262 aaKnown RBP5.02□□□□□ -1.61
HDAC6-212ENST00000461608 PDGFAP04085 211 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 ADH7P40394 386 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 ARSDP51689 593 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 C20orf204Q6ZNR8 217 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 SLC51AQ86UW1 340 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 TREML1Q86YW5 311 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 MICALL1Q8N3F8 863 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 FBF1Q8TES7 1133 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 PIK3R5Q8WYR1 880 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 TNFRSF25Q93038 417 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 LENG1Q96BZ8 264 aaPredicted RBP5.01□□□□□ -1.61
HDAC6-212ENST00000461608 BRD7Q9NPI1 651 aa5.01□□□□□ -1.61
HDAC6-212ENST00000461608 FNDC3AQ9Y2H6 1198 aaKnown RBP5.01□□□□□ -1.61
HDAC6-212ENST00000461608 PRPF40AO75400 957 aaKnown RBP5□□□□□ -1.61
HDAC6-212ENST00000461608 GRNP28799 593 aaKnown RBP5□□□□□ -1.61
HDAC6-212ENST00000461608 DNM1Q05193 864 aaKnown RBP5□□□□□ -1.61
HDAC6-212ENST00000461608 DSC3Q14574 896 aa5□□□□□ -1.61
HDAC6-212ENST00000461608 ALG1LQ6GMV1 187 aa5□□□□□ -1.61
HDAC6-212ENST00000461608 EDEM1Q92611 657 aa5□□□□□ -1.61
HDAC6-212ENST00000461608 SUSD3Q96L08 255 aa5□□□□□ -1.61
HDAC6-212ENST00000461608 FMNL2Q96PY5 1086 aa5□□□□□ -1.61
HDAC6-212ENST00000461608 KLK14Q9P0G3 267 aa5□□□□□ -1.61
HDAC6-212ENST00000461608 POLIQ9UNA4 740 aa5□□□□□ -1.61
HDAC6-212ENST00000461608 GPR182O15218 404 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 MICAL2O94851 1124 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 P4HBP07237 508 aaKnown RBP4.99□□□□□ -1.61
HDAC6-212ENST00000461608 PLCB3Q01970 1234 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 PDE12Q6L8Q7 609 aaKnown RBP4.99□□□□□ -1.61
HDAC6-212ENST00000461608 ZNF428Q96B54 188 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 CEP63Q96MT8 703 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 FRMD6Q96NE9 622 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 DNAJC25Q9H1X3 360 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 CCDC87Q9NVE4 849 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 NAGPAQ9UK23 515 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 BCS1LQ9Y276 419 aa4.99□□□□□ -1.61
HDAC6-212ENST00000461608 IGHA2P01877 340 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 MAPK8P45983 427 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 IDH3AP50213 366 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 KCNQ4P56696 695 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 BTLAQ7Z6A9 289 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 SNX29Q8TEQ0 813 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 BHMTQ93088 406 aa4.98□□□□□ -1.61
HDAC6-212ENST00000461608 NUDT16Q96DE0 195 aaKnown RBP4.98□□□□□ -1.61
HDAC6-212ENST00000461608 MRS2Q9HD23 443 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms