RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 NLRP2Q9NX02 1062 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 EVC2Q86UK5 1308 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 FAM208AQ9UK61 1670 aaKnown RBP7.22□□□□□ -1.25
BRCA1-206ENST00000461574 GRIN3BO60391 1043 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 IL2RBP14784 551 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 NR6A1Q15406 480 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 NBPF1Q3BBV0 1214 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-206ENST00000461574 OCSTAMPQ9BR26 566 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 COL25A1Q9BXS0 654 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-206ENST00000461574 TFCP2L1Q9NZI6 479 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 TTC21BQ7Z4L5 1316 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 TTC21AQ8NDW8 1320 aa7.21□□□□□ -1.26
BRCA1-206ENST00000461574 KTN1Q86UP2 1357 aaKnown RBP7.2□□□□□ -1.26
BRCA1-206ENST00000461574 CTSOP43234 321 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-206ENST00000461574 INTS6LQ5JSJ4 861 aaKnown RBP7.2□□□□□ -1.26
BRCA1-206ENST00000461574 SLC27A3Q5K4L6 730 aa7.2□□□□□ -1.26
BRCA1-206ENST00000461574 RNFT1Q5M7Z0 435 aa7.2□□□□□ -1.26
BRCA1-206ENST00000461574 ZBTB33Q86T24 672 aa7.2□□□□□ -1.26
BRCA1-206ENST00000461574 NLGN2Q8NFZ4 835 aa7.2□□□□□ -1.26
BRCA1-206ENST00000461574 NANOS1Q8WY41 292 aaKnown RBP7.2□□□□□ -1.26
BRCA1-206ENST00000461574 GPBP1L1Q9HC44 474 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-206ENST00000461574 LY75O60449 1722 aa7.2□□□□□ -1.26
BRCA1-206ENST00000461574 ATP10DQ9P241 1426 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 SLC35F4A4IF30 521 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 RELBQ01201 579 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 KCTD17Q8N5Z5 321 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 PROCA1Q8NCQ7 364 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-206ENST00000461574 ZNF526Q8TF50 670 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-206ENST00000461574 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-206ENST00000461574 KRTAP4-6Q9BYQ5 205 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 LRRC4BQ9NT99 713 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 CDV3Q9UKY7 258 aaKnown RBP7.19□□□□□ -1.26
BRCA1-206ENST00000461574 ADAMTS8Q9UP79 889 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 PNPLA7Q6ZV29 1317 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 USP54Q70EL1 1684 aa7.19□□□□□ -1.26
BRCA1-206ENST00000461574 DHX9Q08211 1270 aaKnown RBP7.18□□□□□ -1.26
BRCA1-206ENST00000461574 SKIV2LQ15477 1246 aaKnown RBP7.18□□□□□ -1.26
BRCA1-206ENST00000461574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.18□□□□□ -1.26
BRCA1-206ENST00000461574 DDX54Q8TDD1 881 aaKnown RBP7.18□□□□□ -1.26
BRCA1-206ENST00000461574 ANKRD24Q8TF21 1146 aa7.18□□□□□ -1.26
BRCA1-206ENST00000461574 C5P01031 1676 aa7.18□□□□□ -1.26
BRCA1-206ENST00000461574 YBX3P16989 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-206ENST00000461574 HSPA6P17066 643 aa7.17□□□□□ -1.26
BRCA1-206ENST00000461574 KCNQ4P56696 695 aa7.17□□□□□ -1.26
BRCA1-206ENST00000461574 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
BRCA1-206ENST00000461574 ADAM32Q8TC27 787 aa7.17□□□□□ -1.26
BRCA1-206ENST00000461574 ZNF395Q9H8N7 513 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-206ENST00000461574 TMPRSS4Q9NRS4 437 aa7.17□□□□□ -1.26
BRCA1-206ENST00000461574 ZC3H4Q9UPT8 1303 aaKnown RBP7.17□□□□□ -1.26
BRCA1-206ENST00000461574 RGPD2P0DJD1 1756 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 ITGA6P23229 1130 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 PTK2Q05397 1052 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-206ENST00000461574 MSL1Q68DK7 614 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 EPS8L1Q8TE68 723 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 LTV1Q96GA3 475 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-206ENST00000461574 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.16□□□□□ -1.26
BRCA1-206ENST00000461574 POLMQ9NP87 494 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-206ENST00000461574 CCNL1Q9UK58 526 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-206ENST00000461574 ROCK2O75116 1388 aaKnown RBP7.16□□□□□ -1.26
BRCA1-206ENST00000461574 ANKRD36BQ8N2N9 1353 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 USP47Q96K76 1375 aa7.16□□□□□ -1.26
BRCA1-206ENST00000461574 CDC14CA4D256 554 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 AP1G2O75843 785 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 RAB15P59190 212 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 RASSF7Q02833 373 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
BRCA1-206ENST00000461574 SH3D19Q5HYK7 790 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 PPP2R2DQ66LE6 453 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 NME9Q86XW9 330 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 TMEM151AQ8N4L1 468 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 RNF217Q8TC41 542 aa7.15□□□□□ -1.26
BRCA1-206ENST00000461574 TAF1LQ8IZX4 1826 aa7.15□□□□□ -1.27
BRCA1-206ENST00000461574 GDF11O95390 407 aa7.14□□□□□ -1.27
BRCA1-206ENST00000461574 USP31Q70CQ4 1352 aa7.14□□□□□ -1.27
BRCA1-206ENST00000461574 SV2AQ7L0J3 742 aa7.14□□□□□ -1.27
BRCA1-206ENST00000461574 HDGFL2Q7Z4V5 671 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-206ENST00000461574 SVOPQ8N4V2 548 aa7.14□□□□□ -1.27
BRCA1-206ENST00000461574 TMC1Q8TDI8 760 aa7.14□□□□□ -1.27
BRCA1-206ENST00000461574 FAM117AQ9C073 453 aa7.14□□□□□ -1.27
BRCA1-206ENST00000461574 GPSM3Q9Y4H4 160 aa7.14□□□□□ -1.27
BRCA1-206ENST00000461574 EDC4Q6P2E9 1401 aaKnown RBP7.13□□□□□ -1.27
BRCA1-206ENST00000461574 ADCY9O60503 1353 aa7.13□□□□□ -1.27
BRCA1-206ENST00000461574 SLURP2P0DP57 97 aa7.13□□□□□ -1.27
BRCA1-206ENST00000461574 HMGB2P26583 209 aaKnown RBP7.13□□□□□ -1.27
BRCA1-206ENST00000461574 ADD1P35611 737 aaKnown RBP7.13□□□□□ -1.27
BRCA1-206ENST00000461574 COL23A1Q86Y22 540 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-206ENST00000461574 KDM4CQ9H3R0 1056 aa7.13□□□□□ -1.27
BRCA1-206ENST00000461574 HMX1Q9NP08 348 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-206ENST00000461574 WWC3Q9ULE0 1092 aa7.13□□□□□ -1.27
BRCA1-206ENST00000461574 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
BRCA1-206ENST00000461574 C4BP0C0L5 1744 aa7.13□□□□□ -1.27
BRCA1-206ENST00000461574 IGSF1Q8N6C5 1336 aa7.12□□□□□ -1.27
BRCA1-206ENST00000461574 ERVH48-1M5A8F1 160 aa7.12□□□□□ -1.27
BRCA1-206ENST00000461574 LILRA1O75019 489 aa7.12□□□□□ -1.27
BRCA1-206ENST00000461574 NBPF20Q3BBV1 942 aa7.12□□□□□ -1.27
BRCA1-206ENST00000461574 FOXD4L5Q5VV16 416 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms