RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
IFT88-204ENST00000461115 HAUS7Q99871 368 aa13.17□□□□□ -0.3
IFT88-204ENST00000461115 ANO2Q9NQ90 1003 aa13.17□□□□□ -0.3
IFT88-204ENST00000461115 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
IFT88-204ENST00000461115 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
IFT88-204ENST00000461115 ST18O60284 1047 aa13.16□□□□□ -0.3
IFT88-204ENST00000461115 CTSWP56202 376 aa13.16□□□□□ -0.3
IFT88-204ENST00000461115 CCDC57Q2TAC2 916 aa13.16□□□□□ -0.3
IFT88-204ENST00000461115 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
IFT88-204ENST00000461115 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
IFT88-204ENST00000461115 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
IFT88-204ENST00000461115 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
IFT88-204ENST00000461115 RIC1Q4ADV7 1423 aa13.15□□□□□ -0.3
IFT88-204ENST00000461115 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
IFT88-204ENST00000461115 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
IFT88-204ENST00000461115 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
IFT88-204ENST00000461115 PALD1Q9ULE6 856 aa13.15□□□□□ -0.3
IFT88-204ENST00000461115 RIPOR2Q9Y4F9 1068 aa13.15□□□□□ -0.3
IFT88-204ENST00000461115 MYH7P12883 1935 aa13.15□□□□□ -0.3
IFT88-204ENST00000461115 CASZ1Q86V15 1759 aa13.15□□□□□ -0.3
IFT88-204ENST00000461115 IRS4O14654 1257 aaPredicted RBP13.14□□□□□ -0.31
IFT88-204ENST00000461115 MYT1Q01538 1121 aa13.14□□□□□ -0.31
IFT88-204ENST00000461115 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
IFT88-204ENST00000461115 MAP4K1Q92918 833 aa13.14□□□□□ -0.31
IFT88-204ENST00000461115 ZNF512BQ96KM6 892 aaPredicted RBP13.14□□□□□ -0.31
IFT88-204ENST00000461115 SLKQ9H2G2 1235 aaPredicted RBP13.14□□□□□ -0.31
IFT88-204ENST00000461115 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
IFT88-204ENST00000461115 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
IFT88-204ENST00000461115 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
IFT88-204ENST00000461115 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
IFT88-204ENST00000461115 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
IFT88-204ENST00000461115 HSP90B1P14625 803 aaKnown RBP13.13□□□□□ -0.31
IFT88-204ENST00000461115 HSPA1LP34931 641 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
IFT88-204ENST00000461115 CWC27Q6UX04 472 aaKnown RBP13.13□□□□□ -0.31
IFT88-204ENST00000461115 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
IFT88-204ENST00000461115 PUS3Q9BZE2 481 aaKnown RBP13.13□□□□□ -0.31
IFT88-204ENST00000461115 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 CEP126Q9P2H0 1117 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 NTSR2O95665 410 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 GPTP24298 496 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 CLEC17AQ6ZS10 378 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 TRPC5Q9UL62 973 aaPredicted RBP13.13□□□□□ -0.31
IFT88-204ENST00000461115 CHMP3Q9Y3E7 222 aa13.13□□□□□ -0.31
IFT88-204ENST00000461115 A0A1B0GUL6 1792 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 ANKRD18BA2A2Z9 1011 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 ITGA6P23229 1130 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
IFT88-204ENST00000461115 CUL4AQ13619 759 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 NBR1Q14596 966 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 TTC14Q96N46 770 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
IFT88-204ENST00000461115 GREM2Q9H772 168 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 SNX14Q9Y5W7 946 aa13.12□□□□□ -0.31
IFT88-204ENST00000461115 AFF2P51816 1311 aa13.11□□□□□ -0.31
IFT88-204ENST00000461115 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
IFT88-204ENST00000461115 TIMM10P62072 90 aa13.11□□□□□ -0.31
IFT88-204ENST00000461115 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
IFT88-204ENST00000461115 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
IFT88-204ENST00000461115 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
IFT88-204ENST00000461115 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
IFT88-204ENST00000461115 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 FRAT2O75474 233 aaPredicted RBP13.1□□□□□ -0.31
IFT88-204ENST00000461115 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
IFT88-204ENST00000461115 NEK4P51957 841 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 PTH1RQ03431 593 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 BRWD3Q6RI45 1802 aa13.1□□□□□ -0.31
IFT88-204ENST00000461115 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
IFT88-204ENST00000461115 TAF5LO75529 589 aa13.09□□□□□ -0.31
IFT88-204ENST00000461115 FGFR2P21802 821 aa13.09□□□□□ -0.31
IFT88-204ENST00000461115 SLC10A5Q5PT55 438 aa13.09□□□□□ -0.31
IFT88-204ENST00000461115 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
IFT88-204ENST00000461115 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
IFT88-204ENST00000461115 HELLSQ9NRZ9 838 aa13.09□□□□□ -0.31
IFT88-204ENST00000461115 NARFQ9UHQ1 456 aa13.09□□□□□ -0.31
IFT88-204ENST00000461115 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
IFT88-204ENST00000461115 PDE8BO95263 885 aa13.08□□□□□ -0.32
IFT88-204ENST00000461115 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
IFT88-204ENST00000461115 LDHAL6AQ6ZMR3 332 aa13.08□□□□□ -0.32
IFT88-204ENST00000461115 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
IFT88-204ENST00000461115 PTF1AQ7RTS3 328 aa13.08□□□□□ -0.32
IFT88-204ENST00000461115 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms