RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 ADM5C9JUS6 153 aa18.93■□□□□ 0.62
NCK1-202ENST00000460960 CALD1Q05682 793 aaKnown RBP18.93■□□□□ 0.62
NCK1-202ENST00000460960 DOK7Q18PE1 504 aa18.93■□□□□ 0.62
NCK1-202ENST00000460960 RTL5Q5HYW3 569 aaPredicted RBP18.93■□□□□ 0.62
NCK1-202ENST00000460960 RGMBQ6NW40 437 aa18.93■□□□□ 0.62
NCK1-202ENST00000460960 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
NCK1-202ENST00000460960 C2orf69Q8N8R5 385 aa18.93■□□□□ 0.62
NCK1-202ENST00000460960 DCPSQ96C86 337 aaKnown RBP18.93■□□□□ 0.62
NCK1-202ENST00000460960 CHPF2Q9P2E5 772 aa18.93■□□□□ 0.62
NCK1-202ENST00000460960 IL16Q14005 1332 aa18.93■□□□□ 0.62
NCK1-202ENST00000460960 LRRC37AA6NMS7 1700 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 DDX60Q8IY21 1712 aaKnown RBP18.92■□□□□ 0.62
NCK1-202ENST00000460960 ECE2O60344 883 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 EGFRP00533 1210 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 C8orf58Q8NAV2 365 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 DPF2Q92785 391 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 CELF1Q92879 486 aaKnown RBP18.92■□□□□ 0.62
NCK1-202ENST00000460960 FAM89AQ96GI7 184 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 CDCA7LQ96GN5 454 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 FANCIQ9NVI1 1328 aa18.92■□□□□ 0.62
NCK1-202ENST00000460960 ATP5J2-PTCD1G3V325 749 aa18.91■□□□□ 0.62
NCK1-202ENST00000460960 ZNF157P51786 506 aaPredicted RBP18.91■□□□□ 0.62
NCK1-202ENST00000460960 GPSM2P81274 684 aa18.91■□□□□ 0.62
NCK1-202ENST00000460960 HNRNPUQ00839 825 aaKnown RBP eCLIP18.91■□□□□ 0.62
NCK1-202ENST00000460960 TSPYL6Q8N831 410 aa18.91■□□□□ 0.62
NCK1-202ENST00000460960 EYA3Q99504 573 aa18.91■□□□□ 0.62
NCK1-202ENST00000460960 G3V3G9 751 aa18.9■□□□□ 0.62
NCK1-202ENST00000460960 ELL2O00472 640 aaPredicted RBP18.9■□□□□ 0.62
NCK1-202ENST00000460960 DCAF8Q5TAQ9 597 aa18.9■□□□□ 0.62
NCK1-202ENST00000460960 HDGFL1Q5TGJ6 251 aa18.9■□□□□ 0.62
NCK1-202ENST00000460960 KCNQ5Q9NR82 932 aa18.9■□□□□ 0.62
NCK1-202ENST00000460960 POLLQ9UGP5 575 aa18.9■□□□□ 0.62
NCK1-202ENST00000460960 KIF23Q02241 960 aaPredicted RBP18.89■□□□□ 0.61
NCK1-202ENST00000460960 KIF4BQ2VIQ3 1234 aa18.89■□□□□ 0.61
NCK1-202ENST00000460960 DUSP27Q5VZP5 1158 aa18.89■□□□□ 0.61
NCK1-202ENST00000460960 PLBD2Q8NHP8 589 aa18.89■□□□□ 0.61
NCK1-202ENST00000460960 CCDC102AQ96A19 550 aa18.89■□□□□ 0.61
NCK1-202ENST00000460960 TRPA1O75762 1119 aa18.88■□□□□ 0.61
NCK1-202ENST00000460960 RPS12P25398 132 aaKnown RBP18.88■□□□□ 0.61
NCK1-202ENST00000460960 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
NCK1-202ENST00000460960 SULF1Q8IWU6 871 aa18.88■□□□□ 0.61
NCK1-202ENST00000460960 GGA3Q9NZ52 723 aa18.88■□□□□ 0.61
NCK1-202ENST00000460960 AKAP11Q9UKA4 1901 aa18.88■□□□□ 0.61
NCK1-202ENST00000460960 FAM155AB1AL88 458 aaPredicted RBP18.87■□□□□ 0.61
NCK1-202ENST00000460960 SOX10P56693 466 aa18.87■□□□□ 0.61
NCK1-202ENST00000460960 SF3B3Q15393 1217 aaKnown RBP18.87■□□□□ 0.61
NCK1-202ENST00000460960 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
NCK1-202ENST00000460960 COL4A1P02462 1669 aa18.86■□□□□ 0.61
NCK1-202ENST00000460960 IRS4O14654 1257 aaPredicted RBP18.86■□□□□ 0.61
NCK1-202ENST00000460960 TBC1D16Q8TBP0 767 aa18.86■□□□□ 0.61
NCK1-202ENST00000460960 ISCA1Q9BUE6 129 aa18.86■□□□□ 0.61
NCK1-202ENST00000460960 ZC3H12CQ9C0D7 883 aaKnown RBP18.86■□□□□ 0.61
NCK1-202ENST00000460960 SAGE1Q9NXZ1 904 aa18.86■□□□□ 0.61
NCK1-202ENST00000460960 ASTN2O75129 1339 aaPredicted RBP18.85■□□□□ 0.61
NCK1-202ENST00000460960 UFL1O94874 794 aa18.85■□□□□ 0.61
NCK1-202ENST00000460960 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
NCK1-202ENST00000460960 EXOSC9Q06265 439 aaKnown RBP18.85■□□□□ 0.61
NCK1-202ENST00000460960 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
NCK1-202ENST00000460960 SLFN5Q08AF3 891 aa18.85■□□□□ 0.61
NCK1-202ENST00000460960 RNF186Q9NXI6 227 aa18.85■□□□□ 0.61
NCK1-202ENST00000460960 ANKIB1Q9P2G1 1089 aa18.85■□□□□ 0.61
NCK1-202ENST00000460960 CDCA5Q96FF9 252 aa18.84■□□□□ 0.61
NCK1-202ENST00000460960 DBF4Q9UBU7 674 aaPredicted RBP18.84■□□□□ 0.61
NCK1-202ENST00000460960 SCN9AQ15858 1988 aa18.84■□□□□ 0.61
NCK1-202ENST00000460960 PDE4DIPQ5VU43 2346 aa18.83■□□□□ 0.61
NCK1-202ENST00000460960 SLC10A3P09131 477 aa18.83■□□□□ 0.6
NCK1-202ENST00000460960 ANGEL2Q5VTE6 544 aaKnown RBP18.82■□□□□ 0.6
NCK1-202ENST00000460960 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
NCK1-202ENST00000460960 TRMT2AQ8IZ69 625 aaKnown RBP18.82■□□□□ 0.6
NCK1-202ENST00000460960 CCDC85AQ96PX6 553 aaPredicted RBP18.82■□□□□ 0.6
NCK1-202ENST00000460960 SEC31BQ9NQW1 1179 aa18.82■□□□□ 0.6
NCK1-202ENST00000460960 HYPKQ9NX55 129 aa18.82■□□□□ 0.6
NCK1-202ENST00000460960 GGA1Q9UJY5 639 aa18.82■□□□□ 0.6
NCK1-202ENST00000460960 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
NCK1-202ENST00000460960 HOXB7P09629 217 aa18.81■□□□□ 0.6
NCK1-202ENST00000460960 SCARF1Q14162 830 aa18.81■□□□□ 0.6
NCK1-202ENST00000460960 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
NCK1-202ENST00000460960 CSRNP1Q96S65 589 aa18.81■□□□□ 0.6
NCK1-202ENST00000460960 MYH16Q9H6N6 1097 aa18.81■□□□□ 0.6
NCK1-202ENST00000460960 E9PSI1 815 aa18.8■□□□□ 0.6
NCK1-202ENST00000460960 VAMP4O75379 141 aa18.79■□□□□ 0.6
NCK1-202ENST00000460960 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
NCK1-202ENST00000460960 CTU1Q7Z7A3 348 aaKnown RBP18.79■□□□□ 0.6
NCK1-202ENST00000460960 RASAL3Q86YV0 1011 aa18.79■□□□□ 0.6
NCK1-202ENST00000460960 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
NCK1-202ENST00000460960 MYD88Q99836 296 aa18.79■□□□□ 0.6
NCK1-202ENST00000460960 SCAF8Q9UPN6 1271 aaKnown RBP18.79■□□□□ 0.6
NCK1-202ENST00000460960 ZBED9Q6R2W3 1325 aa18.78■□□□□ 0.6
NCK1-202ENST00000460960 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
NCK1-202ENST00000460960 CCDC152Q4G0S7 254 aa18.78■□□□□ 0.6
NCK1-202ENST00000460960 ZBTB38Q8NAP3 1195 aaPredicted RBP18.78■□□□□ 0.6
NCK1-202ENST00000460960 PODXL2Q9NZ53 605 aa18.78■□□□□ 0.6
NCK1-202ENST00000460960 TTLL12Q14166 644 aaPredicted RBP18.77■□□□□ 0.6
NCK1-202ENST00000460960 AGBL3Q8NEM8 1001 aa18.77■□□□□ 0.6
NCK1-202ENST00000460960 FBXW7Q969H0 707 aa18.77■□□□□ 0.6
NCK1-202ENST00000460960 HDAC9Q9UKV0 1011 aa18.77■□□□□ 0.6
NCK1-202ENST00000460960 PAPPA2Q9BXP8 1791 aa18.76■□□□□ 0.59
NCK1-202ENST00000460960 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
NCK1-202ENST00000460960 ZNF280AP59817 542 aaPredicted RBP18.76■□□□□ 0.59
NCK1-202ENST00000460960 TRIM28Q13263 835 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms