RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 FSTL1Q12841 308 aa11.94□□□□□ -0.5
EPB41-208ENST00000460378 TTF1Q15361 905 aaPredicted RBP11.94□□□□□ -0.5
EPB41-208ENST00000460378 FSD1Q9BTV5 496 aa11.94□□□□□ -0.5
EPB41-208ENST00000460378 PLS1Q14651 629 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 RALYLQ86SE5 291 aaKnown RBP11.93□□□□□ -0.5
EPB41-208ENST00000460378 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
EPB41-208ENST00000460378 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 LRP6O75581 1613 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 TMEM88BA6NKF7 163 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
EPB41-208ENST00000460378 ZBTB38Q8NAP3 1195 aaPredicted RBP11.93□□□□□ -0.5
EPB41-208ENST00000460378 PTPRCP08575 1304 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 BRDTQ58F21 947 aaPredicted RBP11.93□□□□□ -0.5
EPB41-208ENST00000460378 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
EPB41-208ENST00000460378 GADL1Q6ZQY3 521 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 NLGN2Q8NFZ4 835 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
EPB41-208ENST00000460378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.93□□□□□ -0.5
EPB41-208ENST00000460378 MFSD14BQ5SR56 506 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 CTCFP49711 727 aaPredicted RBP11.92□□□□□ -0.5
EPB41-208ENST00000460378 NFXL1Q6ZNB6 911 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 DISP2A7MBM2 1401 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 IL15P40933 162 aaPredicted RBP11.92□□□□□ -0.5
EPB41-208ENST00000460378 NAA16Q6N069 864 aaPredicted RBP11.92□□□□□ -0.5
EPB41-208ENST00000460378 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 JAG2Q9Y219 1238 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 F6X3S4 739 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 PCCAP05165 728 aaPredicted RBP11.92□□□□□ -0.5
EPB41-208ENST00000460378 UBXN2AP68543 259 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 AACSQ86V21 672 aa11.92□□□□□ -0.5
EPB41-208ENST00000460378 OSBPP22059 807 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 RRP12Q5JTH9 1297 aaKnown RBP11.91□□□□□ -0.5
EPB41-208ENST00000460378 WWC2Q6AWC2 1192 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 PODNQ7Z5L7 613 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 COA1Q9GZY4 146 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 CTSWP56202 376 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 ANP32EQ9BTT0 268 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 IL16Q14005 1332 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
EPB41-208ENST00000460378 MYCP01106 439 aaPredicted RBP11.91□□□□□ -0.5
EPB41-208ENST00000460378 CDK11BP21127 795 aaKnown RBP11.91□□□□□ -0.5
EPB41-208ENST00000460378 CERS3Q8IU89 383 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 ECE2O60344 883 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 CCNA1P78396 465 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 TTC6Q86TZ1 520 aa11.91□□□□□ -0.5
EPB41-208ENST00000460378 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
EPB41-208ENST00000460378 COL14A1Q05707 1796 aaKnown RBP11.91□□□□□ -0.5
EPB41-208ENST00000460378 GLTPD2A6NH11 291 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 KCNQ3O43525 872 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 ALDH1A1P00352 501 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 CHMP4CQ96CF2 233 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 STRCQ7RTU9 1775 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 GBA2Q9HCG7 927 aaPredicted RBP11.9□□□□□ -0.5
EPB41-208ENST00000460378 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
EPB41-208ENST00000460378 PNMA3Q9UL41 463 aa11.9□□□□□ -0.51
EPB41-208ENST00000460378 NOB1Q9ULX3 412 aaKnown RBP11.9□□□□□ -0.51
EPB41-208ENST00000460378 GMPSP49915 693 aaPredicted RBP11.89□□□□□ -0.51
EPB41-208ENST00000460378 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
EPB41-208ENST00000460378 EIF5P55010 431 aaKnown RBP11.89□□□□□ -0.51
EPB41-208ENST00000460378 USP50Q70EL3 339 aaPredicted RBP11.89□□□□□ -0.51
EPB41-208ENST00000460378 ZFYVE28Q9HCC9 887 aa11.89□□□□□ -0.51
EPB41-208ENST00000460378 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
EPB41-208ENST00000460378 HSPA6P17066 643 aa11.89□□□□□ -0.51
EPB41-208ENST00000460378 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
EPB41-208ENST00000460378 SUSD4Q5VX71 490 aa11.89□□□□□ -0.51
EPB41-208ENST00000460378 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
EPB41-208ENST00000460378 RAET1EQ8TD07 263 aa11.89□□□□□ -0.51
EPB41-208ENST00000460378 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
EPB41-208ENST00000460378 CA12O43570 354 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 CCDC96Q2M329 555 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 CNGA1P29973 690 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 GPC2Q8N158 579 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 COA7Q96BR5 231 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 PUM3Q15397 648 aaKnown RBP11.88□□□□□ -0.51
EPB41-208ENST00000460378 GPR101Q96P66 508 aaPredicted RBP11.88□□□□□ -0.51
EPB41-208ENST00000460378 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 NOGQ13253 232 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 TEX11Q8IYF3 940 aa11.88□□□□□ -0.51
EPB41-208ENST00000460378 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 NOD1Q9Y239 953 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 USP32Q8NFA0 1604 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 ALDH1L2Q3SY69 923 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 ATP6V0A2Q9Y487 856 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
EPB41-208ENST00000460378 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 CYP7A1P22680 504 aa11.87□□□□□ -0.51
EPB41-208ENST00000460378 HIP1O00291 1037 aa11.86□□□□□ -0.51
EPB41-208ENST00000460378 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
EPB41-208ENST00000460378 NMRK2Q9NPI5 230 aa11.86□□□□□ -0.51
EPB41-208ENST00000460378 GPHNQ9NQX3 736 aaPredicted RBP11.86□□□□□ -0.51
EPB41-208ENST00000460378 SCNN1DP51172 638 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms