RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 TMC1Q8TDI8 760 aa5.87□□□□□ -1.47
VPS8-215ENST00000460158 PSMG3-AS1Q96PY0 264 aa5.87□□□□□ -1.47
VPS8-215ENST00000460158 CITED4Q96RK1 184 aa5.87□□□□□ -1.47
VPS8-215ENST00000460158 FAM129BQ96TA1 746 aa5.87□□□□□ -1.47
VPS8-215ENST00000460158 GSX2Q9BZM3 304 aa5.87□□□□□ -1.47
VPS8-215ENST00000460158 TPSG1Q9NRR2 321 aa5.87□□□□□ -1.47
VPS8-215ENST00000460158 STARD13Q9Y3M8 1113 aa5.87□□□□□ -1.47
VPS8-215ENST00000460158 SASH3O75995 380 aa5.86□□□□□ -1.47
VPS8-215ENST00000460158 EGFRP00533 1210 aa5.86□□□□□ -1.47
VPS8-215ENST00000460158 RPLP1P05386 114 aaKnown RBP5.86□□□□□ -1.47
VPS8-215ENST00000460158 CCINQ13939 588 aa5.86□□□□□ -1.47
VPS8-215ENST00000460158 KRT25Q7Z3Z0 450 aa5.86□□□□□ -1.47
VPS8-215ENST00000460158 RAB44Q7Z6P3 723 aaPredicted RBP5.86□□□□□ -1.47
VPS8-215ENST00000460158 ASB16Q96NS5 453 aa5.86□□□□□ -1.47
VPS8-215ENST00000460158 FNDC3AQ9Y2H6 1198 aaKnown RBP5.86□□□□□ -1.47
VPS8-215ENST00000460158 CCDC9Q9Y3X0 531 aaKnown RBP5.86□□□□□ -1.47
VPS8-215ENST00000460158 ANKRD33BA6NCL7 494 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 GPR182O15218 404 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 ALBP02768 609 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 NID1P14543 1247 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 TARSP26639 723 aaKnown RBP5.85□□□□□ -1.47
VPS8-215ENST00000460158 ADH7P40394 386 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 PDE3BQ13370 1112 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 C20orf204Q6ZNR8 217 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 ZSCAN29Q8IWY8 852 aaPredicted RBP5.85□□□□□ -1.47
VPS8-215ENST00000460158 TTC16Q8NEE8 873 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 C11orf16Q9NQ32 467 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 ZFATQ9P243 1243 aa5.85□□□□□ -1.47
VPS8-215ENST00000460158 DYRK3O43781 588 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 NFKB1P19838 968 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 PDE12Q6L8Q7 609 aaKnown RBP5.84□□□□□ -1.47
VPS8-215ENST00000460158 XKR5Q6UX68 686 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 ZNF438Q7Z4V0 828 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 NLRP13Q86W25 1043 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 BHMTQ93088 406 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 DMRTB1Q96MA1 342 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 NIF3L1Q9GZT8 377 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 ELP3Q9H9T3 547 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 EFCC1Q9HA90 598 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 TMEM63CQ9P1W3 806 aa5.84□□□□□ -1.47
VPS8-215ENST00000460158 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.84□□□□□ -1.47
VPS8-215ENST00000460158 C9orf172C9J069 976 aa5.83□□□□□ -1.48
VPS8-215ENST00000460158 TREHO43280 583 aa5.83□□□□□ -1.48
VPS8-215ENST00000460158 RARAP10276 462 aa5.83□□□□□ -1.48
VPS8-215ENST00000460158 EHHADHQ08426 723 aa5.83□□□□□ -1.48
VPS8-215ENST00000460158 DSC3Q14574 896 aa5.83□□□□□ -1.48
VPS8-215ENST00000460158 RGS22Q8NE09 1264 aa5.83□□□□□ -1.48
VPS8-215ENST00000460158 PNMA5Q96PV4 448 aa5.83□□□□□ -1.48
VPS8-215ENST00000460158 FOXD3Q9UJU5 478 aaPredicted RBP5.83□□□□□ -1.48
VPS8-215ENST00000460158 SCO2A0A1W2PP80 73 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 MMP20O60882 483 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 LILRB5O75023 590 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 TNFRSF21O75509 655 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 PLCB3Q01970 1234 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 ORC1Q13415 861 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 FOXD4L6Q3SYB3 417 aaPredicted RBP5.82□□□□□ -1.48
VPS8-215ENST00000460158 FOXD4L3Q6VB84 417 aaPredicted RBP5.82□□□□□ -1.48
VPS8-215ENST00000460158 C8orf86Q6ZUL3 223 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 NPAS4Q8IUM7 802 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 ALKBH8Q96BT7 664 aaKnown RBP5.82□□□□□ -1.48
VPS8-215ENST00000460158 ABI2Q9NYB9 513 aaPredicted RBP5.82□□□□□ -1.48
VPS8-215ENST00000460158 CNTN3Q9P232 1028 aa5.82□□□□□ -1.48
VPS8-215ENST00000460158 CYP2E1P05181 493 aaPredicted RBP5.81□□□□□ -1.48
VPS8-215ENST00000460158 H2AFB1P0C5Y9 115 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 H2AFB2P0C5Z0 115 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 ELNP15502 786 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 GRIK4Q16099 956 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 TRAPPC3LQ5T215 181 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 ARTNQ5T4W7 220 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 C1orf127Q8N9H9 656 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
VPS8-215ENST00000460158 MAP3K6O95382 1288 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 P4HBP07237 508 aaKnown RBP5.8□□□□□ -1.48
VPS8-215ENST00000460158 ERCC3P19447 782 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 MAPK8P45983 427 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 NRG1Q02297 640 aaPredicted RBP5.8□□□□□ -1.48
VPS8-215ENST00000460158 FMR1Q06787 632 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS8-215ENST00000460158 ADGRE1Q14246 886 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 PRSS36Q5K4E3 855 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 TTC39BQ5VTQ0 682 aaPredicted RBP5.8□□□□□ -1.48
VPS8-215ENST00000460158 SNX29Q8TEQ0 813 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 FOXD4L4Q8WXT5 416 aaPredicted RBP5.8□□□□□ -1.48
VPS8-215ENST00000460158 LENG1Q96BZ8 264 aaPredicted RBP5.8□□□□□ -1.48
VPS8-215ENST00000460158 CHRDQ9H2X0 955 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 IGFLR1Q9H665 355 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 ZFP64Q9NPA5 681 aa5.8□□□□□ -1.48
VPS8-215ENST00000460158 TLR7Q9NYK1 1049 aaKnown RBP5.8□□□□□ -1.48
VPS8-215ENST00000460158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.8□□□□□ -1.48
VPS8-215ENST00000460158 A0A0A0MRY4 1105 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
VPS8-215ENST00000460158 EIF1AYO14602 144 aaKnown RBP5.79□□□□□ -1.48
VPS8-215ENST00000460158 EREGO14944 169 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 PHACTR2O75167 634 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 SELPP16109 830 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 RAC1P63000 192 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 TBC1D8BQ0IIM8 1120 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 MBTPS1Q14703 1052 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 USPL1Q5W0Q7 1092 aa5.79□□□□□ -1.48
VPS8-215ENST00000460158 DHX32Q7L7V1 743 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms