RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 SLC4A8Q2Y0W8 1093 aa18.13■□□□□ 0.49
PCOLCE-202ENST00000460002 GIGYF2Q6Y7W6 1299 aaKnown RBP18.13■□□□□ 0.49
PCOLCE-202ENST00000460002 DDX46Q7L014 1031 aaKnown RBP18.13■□□□□ 0.49
PCOLCE-202ENST00000460002 POLLQ9UGP5 575 aa18.13■□□□□ 0.49
PCOLCE-202ENST00000460002 IGF2BP3O00425 579 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 TCIRG1Q13488 830 aa18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 PARP10Q53GL7 1025 aa18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 NSFL1CQ9UNZ2 370 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 LAMB2P55268 1798 aa18.12■□□□□ 0.49
PCOLCE-202ENST00000460002 LAMA3Q16787 3333 aa18.11■□□□□ 0.49
PCOLCE-202ENST00000460002 WTIPA6NIX2 430 aaPredicted RBP18.11■□□□□ 0.49
PCOLCE-202ENST00000460002 C6orf229H3BNL8 230 aa18.11■□□□□ 0.49
PCOLCE-202ENST00000460002 DPF3Q92784 378 aa18.11■□□□□ 0.49
PCOLCE-202ENST00000460002 SCN9AQ15858 1988 aa18.1■□□□□ 0.49
PCOLCE-202ENST00000460002 LAMB4A4D0S4 1761 aa18.1■□□□□ 0.49
PCOLCE-202ENST00000460002 MYCP01106 439 aaPredicted RBP18.1■□□□□ 0.49
PCOLCE-202ENST00000460002 MYL6BP14649 208 aa18.1■□□□□ 0.49
PCOLCE-202ENST00000460002 MCM10Q7L590 875 aa18.1■□□□□ 0.49
PCOLCE-202ENST00000460002 MYOZ2Q9NPC6 264 aa18.1■□□□□ 0.49
PCOLCE-202ENST00000460002 MANSC4A6NHS7 340 aaPredicted RBP18.09■□□□□ 0.49
PCOLCE-202ENST00000460002 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-202ENST00000460002 SLC9C1Q4G0N8 1177 aa18.09■□□□□ 0.49
PCOLCE-202ENST00000460002 TMC4Q7Z404 712 aa18.09■□□□□ 0.49
PCOLCE-202ENST00000460002 PTCH2Q9Y6C5 1203 aa18.09■□□□□ 0.49
PCOLCE-202ENST00000460002 TAF1P21675 1872 aa18.09■□□□□ 0.49
PCOLCE-202ENST00000460002 ANKRD36CQ5JPF3 1778 aa18.09■□□□□ 0.49
PCOLCE-202ENST00000460002 UNC80Q8N2C7 3258 aa18.08■□□□□ 0.49
PCOLCE-202ENST00000460002 INHBEP58166 350 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 GPSM2P81274 684 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 CRHR2Q13324 411 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 PRKG1Q13976 671 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 LDLRAD1Q5T700 205 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 RSBN1LQ6PCB5 846 aaPredicted RBP18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 NBPF11Q86T75 865 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 AGBL3Q8NEM8 1001 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 DDX60Q8IY21 1712 aaKnown RBP18.08■□□□□ 0.48
PCOLCE-202ENST00000460002 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
PCOLCE-202ENST00000460002 KDM3BQ7LBC6 1761 aa18.07■□□□□ 0.48
PCOLCE-202ENST00000460002 SP3Q02447 781 aa18.07■□□□□ 0.48
PCOLCE-202ENST00000460002 GMLQ99445 158 aa18.07■□□□□ 0.48
PCOLCE-202ENST00000460002 NF2P35240 595 aa18.06■□□□□ 0.48
PCOLCE-202ENST00000460002 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
PCOLCE-202ENST00000460002 NBPF9Q3BBW0 867 aa18.06■□□□□ 0.48
PCOLCE-202ENST00000460002 ARMC9Q7Z3E5 817 aa18.06■□□□□ 0.48
PCOLCE-202ENST00000460002 EYA3Q99504 573 aa18.06■□□□□ 0.48
PCOLCE-202ENST00000460002 MIS18AQ9NYP9 233 aa18.06■□□□□ 0.48
PCOLCE-202ENST00000460002 A0A1W2PPC1 479 aa18.05■□□□□ 0.48
PCOLCE-202ENST00000460002 USP17L8P0C7I0 530 aa18.05■□□□□ 0.48
PCOLCE-202ENST00000460002 TBC1D16Q8TBP0 767 aa18.05■□□□□ 0.48
PCOLCE-202ENST00000460002 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
PCOLCE-202ENST00000460002 CELF1Q92879 486 aaKnown RBP18.05■□□□□ 0.48
PCOLCE-202ENST00000460002 SHISA4Q96DD7 197 aa18.05■□□□□ 0.48
PCOLCE-202ENST00000460002 FZD1Q9UP38 647 aa18.05■□□□□ 0.48
PCOLCE-202ENST00000460002 COL4A1P02462 1669 aa18.04■□□□□ 0.48
PCOLCE-202ENST00000460002 PRKAR2BP31323 418 aa18.03■□□□□ 0.48
PCOLCE-202ENST00000460002 SH3TC2Q8TF17 1288 aa18.03■□□□□ 0.48
PCOLCE-202ENST00000460002 RTF1Q92541 710 aaKnown RBP18.03■□□□□ 0.48
PCOLCE-202ENST00000460002 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.03■□□□□ 0.48
PCOLCE-202ENST00000460002 ANGEL1Q9UNK9 670 aaKnown RBP18.03■□□□□ 0.48
PCOLCE-202ENST00000460002 STXBP5LQ9Y2K9 1186 aa18.03■□□□□ 0.48
PCOLCE-202ENST00000460002 ZBTB48P10074 688 aaPredicted RBP18.02■□□□□ 0.48
PCOLCE-202ENST00000460002 WNK4Q96J92 1243 aa18.02■□□□□ 0.48
PCOLCE-202ENST00000460002 ZC3H12CQ9C0D7 883 aaKnown RBP18.02■□□□□ 0.48
PCOLCE-202ENST00000460002 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
PCOLCE-202ENST00000460002 UBE2Q1Q7Z7E8 422 aa18.01■□□□□ 0.47
PCOLCE-202ENST00000460002 NLRP10Q86W26 655 aa18.01■□□□□ 0.47
PCOLCE-202ENST00000460002 SLC10A4Q96EP9 437 aa18.01■□□□□ 0.47
PCOLCE-202ENST00000460002 CLMNQ96JQ2 1002 aa18.01■□□□□ 0.47
PCOLCE-202ENST00000460002 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
PCOLCE-202ENST00000460002 Q7L0L9 218 aa18■□□□□ 0.47
PCOLCE-202ENST00000460002 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
PCOLCE-202ENST00000460002 DEFB123Q8N688 67 aa18■□□□□ 0.47
PCOLCE-202ENST00000460002 PTPN18Q99952 460 aa18■□□□□ 0.47
PCOLCE-202ENST00000460002 RSPH6AQ9H0K4 717 aa18■□□□□ 0.47
PCOLCE-202ENST00000460002 SH3TC1Q8TE82 1336 aa17.99■□□□□ 0.47
PCOLCE-202ENST00000460002 G3V3G9 751 aa17.99■□□□□ 0.47
PCOLCE-202ENST00000460002 WNT10BO00744 389 aa17.99■□□□□ 0.47
PCOLCE-202ENST00000460002 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
PCOLCE-202ENST00000460002 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
PCOLCE-202ENST00000460002 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
PCOLCE-202ENST00000460002 NR2E3Q9Y5X4 410 aa17.99■□□□□ 0.47
PCOLCE-202ENST00000460002 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCOLCE-202ENST00000460002 HTATIP2Q9BUP3 242 aa17.98■□□□□ 0.47
PCOLCE-202ENST00000460002 PRDM6Q9NQX0 595 aa17.98■□□□□ 0.47
PCOLCE-202ENST00000460002 LAMB1P07942 1786 aa17.98■□□□□ 0.47
PCOLCE-202ENST00000460002 VCANP13611 3396 aa17.97■□□□□ 0.47
PCOLCE-202ENST00000460002 GJA5P36382 358 aa17.97■□□□□ 0.47
PCOLCE-202ENST00000460002 MTFR1Q15390 333 aa17.97■□□□□ 0.47
PCOLCE-202ENST00000460002 OTUD7BQ6GQQ9 843 aa17.97■□□□□ 0.47
PCOLCE-202ENST00000460002 GPR153Q6NV75 609 aa17.97■□□□□ 0.47
PCOLCE-202ENST00000460002 ANKRD13DQ6ZTN6 518 aa17.97■□□□□ 0.47
PCOLCE-202ENST00000460002 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
PCOLCE-202ENST00000460002 UFL1O94874 794 aa17.96■□□□□ 0.47
PCOLCE-202ENST00000460002 EIF4A1P60842 406 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms