RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 TMEM88BA6NKF7 163 aa26.65■■□□□ 1.86
SRM-202ENST00000459997 LINS1Q8NG48 757 aa26.65■■□□□ 1.86
SRM-202ENST00000459997 GREM2Q9H772 168 aa26.65■■□□□ 1.86
SRM-202ENST00000459997 MKRN1Q9UHC7 482 aaKnown RBP26.65■■□□□ 1.86
SRM-202ENST00000459997 GGA1Q9UJY5 639 aa26.65■■□□□ 1.86
SRM-202ENST00000459997 ZNF521Q96K83 1311 aa26.65■■□□□ 1.86
SRM-202ENST00000459997 ECE2O60344 883 aa26.64■■□□□ 1.86
SRM-202ENST00000459997 DOK7Q18PE1 504 aa26.64■■□□□ 1.86
SRM-202ENST00000459997 ZC3H12CQ9C0D7 883 aaKnown RBP26.64■■□□□ 1.86
SRM-202ENST00000459997 RTL9Q8NET4 1388 aa26.63■■□□□ 1.85
SRM-202ENST00000459997 PSMD14O00487 310 aa26.62■■□□□ 1.85
SRM-202ENST00000459997 XDHP47989 1333 aa26.62■■□□□ 1.85
SRM-202ENST00000459997 F6X3S4 739 aa26.61■■□□□ 1.85
SRM-202ENST00000459997 ZBTB12Q9Y330 459 aaPredicted RBP26.61■■□□□ 1.85
SRM-202ENST00000459997 CNTNAP1P78357 1384 aa26.6■■□□□ 1.85
SRM-202ENST00000459997 G3V3G9 751 aa26.6■■□□□ 1.85
SRM-202ENST00000459997 CASP7P55210 303 aa26.6■■□□□ 1.85
SRM-202ENST00000459997 DCAF8Q5TAQ9 597 aa26.6■■□□□ 1.85
SRM-202ENST00000459997 PLA2G12BQ9BX93 195 aa26.6■■□□□ 1.85
SRM-202ENST00000459997 KCNQ5Q9NR82 932 aa26.6■■□□□ 1.85
SRM-202ENST00000459997 CNOT7Q9UIV1 285 aaKnown RBP26.6■■□□□ 1.85
SRM-202ENST00000459997 PCNTO95613 3336 aa26.6■■□□□ 1.85
SRM-202ENST00000459997 SHTN1A0MZ66 631 aa26.59■■□□□ 1.85
SRM-202ENST00000459997 MICALL2Q8IY33 904 aa26.59■■□□□ 1.85
SRM-202ENST00000459997 BSDC1Q9NW68 430 aaPredicted RBP26.59■■□□□ 1.85
SRM-202ENST00000459997 H7C1D1 291 aa26.58■■□□□ 1.85
SRM-202ENST00000459997 ATP2B4P23634 1241 aa26.57■■□□□ 1.84
SRM-202ENST00000459997 FMR1Q06787 632 aaKnown RBP eCLIP26.57■■□□□ 1.84
SRM-202ENST00000459997 FAM161AQ3B820 660 aa26.57■■□□□ 1.84
SRM-202ENST00000459997 BEND3Q5T5X7 828 aa26.57■■□□□ 1.84
SRM-202ENST00000459997 TRPM4Q8TD43 1214 aa26.57■■□□□ 1.84
SRM-202ENST00000459997 DPF2Q92785 391 aa26.57■■□□□ 1.84
SRM-202ENST00000459997 MINPP1Q9UNW1 487 aa26.57■■□□□ 1.84
SRM-202ENST00000459997 SCN9AQ15858 1988 aa26.57■■□□□ 1.84
SRM-202ENST00000459997 TRAF5O00463 557 aa26.56■■□□□ 1.84
SRM-202ENST00000459997 ITGA6P23229 1130 aa26.56■■□□□ 1.84
SRM-202ENST00000459997 IGHMBP2P38935 993 aaKnown RBP26.56■■□□□ 1.84
SRM-202ENST00000459997 RPS12P25398 132 aaKnown RBP26.55■■□□□ 1.84
SRM-202ENST00000459997 HIRAP54198 1017 aaPredicted RBP26.55■■□□□ 1.84
SRM-202ENST00000459997 CSF1RP07333 972 aa26.54■■□□□ 1.84
SRM-202ENST00000459997 HSPA1AP0DMV8 641 aaKnown RBP26.54■■□□□ 1.84
SRM-202ENST00000459997 HSPA1BP0DMV9 641 aaKnown RBP26.54■■□□□ 1.84
SRM-202ENST00000459997 PGAP2Q9UHJ9 254 aa26.54■■□□□ 1.84
SRM-202ENST00000459997 ABT1Q9ULW3 272 aaKnown RBP26.54■■□□□ 1.84
SRM-202ENST00000459997 TRPM7Q96QT4 1865 aa26.53■■□□□ 1.84
SRM-202ENST00000459997 WTIPA6NIX2 430 aaPredicted RBP26.53■■□□□ 1.84
SRM-202ENST00000459997 E9PSI1 815 aa26.53■■□□□ 1.84
SRM-202ENST00000459997 ZC3H15Q8WU90 426 aaKnown RBP26.53■■□□□ 1.84
SRM-202ENST00000459997 VIL1P09327 827 aaKnown RBP26.52■■□□□ 1.84
SRM-202ENST00000459997 VEGFBP49765 207 aa26.52■■□□□ 1.84
SRM-202ENST00000459997 SLC4A10Q6U841 1118 aa26.52■■□□□ 1.84
SRM-202ENST00000459997 SAMD7Q7Z3H4 446 aa26.52■■□□□ 1.84
SRM-202ENST00000459997 MPHOSPH8Q99549 860 aa26.52■■□□□ 1.84
SRM-202ENST00000459997 PSME4Q14997 1843 aa26.51■■□□□ 1.83
SRM-202ENST00000459997 MED23Q9ULK4 1368 aa26.51■■□□□ 1.83
SRM-202ENST00000459997 RASSF10A6NK89 507 aa26.51■■□□□ 1.83
SRM-202ENST00000459997 CCT4P50991 539 aaKnown RBP26.51■■□□□ 1.83
SRM-202ENST00000459997 TBC1D10BQ4KMP7 808 aaPredicted RBP26.51■■□□□ 1.83
SRM-202ENST00000459997 GLIS2Q9BZE0 524 aaPredicted RBP26.51■■□□□ 1.83
SRM-202ENST00000459997 FOXO4P98177 505 aa26.5■■□□□ 1.83
SRM-202ENST00000459997 DEFB115Q30KQ5 88 aa26.5■■□□□ 1.83
SRM-202ENST00000459997 CST9Q5W186 159 aa26.5■■□□□ 1.83
SRM-202ENST00000459997 ANKRD18BA2A2Z9 1011 aa26.49■■□□□ 1.83
SRM-202ENST00000459997 GRM8O00222 908 aa26.49■■□□□ 1.83
SRM-202ENST00000459997 EGFRP00533 1210 aa26.49■■□□□ 1.83
SRM-202ENST00000459997 CHMP3Q9Y3E7 222 aa26.49■■□□□ 1.83
SRM-202ENST00000459997 ALDH1L1O75891 902 aa26.48■■□□□ 1.83
SRM-202ENST00000459997 SLFN5Q08AF3 891 aa26.48■■□□□ 1.83
SRM-202ENST00000459997 RBM26Q5T8P6 1007 aaKnown RBP26.48■■□□□ 1.83
SRM-202ENST00000459997 IFFO2Q5TF58 517 aa26.48■■□□□ 1.83
SRM-202ENST00000459997 PODNQ7Z5L7 613 aa26.48■■□□□ 1.83
SRM-202ENST00000459997 SRCIN1Q9C0H9 1055 aa26.48■■□□□ 1.83
SRM-202ENST00000459997 ANKRD2Q9GZV1 360 aa26.48■■□□□ 1.83
SRM-202ENST00000459997 C9orf78Q9NZ63 289 aaPredicted RBP26.48■■□□□ 1.83
SRM-202ENST00000459997 LEMD3Q9Y2U8 911 aa26.48■■□□□ 1.83
SRM-202ENST00000459997 CCER2I3L3R5 266 aa26.47■■□□□ 1.83
SRM-202ENST00000459997 IFIT5Q13325 482 aaKnown RBP26.47■■□□□ 1.83
SRM-202ENST00000459997 RSBN1LQ6PCB5 846 aaPredicted RBP26.47■■□□□ 1.83
SRM-202ENST00000459997 CDC37L1Q7L3B6 337 aa26.47■■□□□ 1.83
SRM-202ENST00000459997 MRPL50Q8N5N7 158 aaKnown RBP26.47■■□□□ 1.83
SRM-202ENST00000459997 ZNF609O15014 1411 aa26.47■■□□□ 1.83
SRM-202ENST00000459997 CELF2O95319 508 aaKnown RBP26.46■■□□□ 1.83
SRM-202ENST00000459997 ZNF804BA4D1E1 1349 aa26.45■■□□□ 1.83
SRM-202ENST00000459997 USP17L3A6NCW0 530 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 USP17L4A6NCW7 530 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 KIF4BQ2VIQ3 1234 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 EPHA10Q5JZY3 1008 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 LMBR1LQ6UX01 489 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 USP17L1Q7RTZ2 530 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 AGBL3Q8NEM8 1001 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 CDCA7LQ96GN5 454 aa26.45■■□□□ 1.82
SRM-202ENST00000459997 CHRNDQ07001 517 aa26.44■■□□□ 1.82
SRM-202ENST00000459997 COL13A1Q5TAT6 717 aaPredicted RBP26.44■■□□□ 1.82
SRM-202ENST00000459997 USP48Q86UV5 1035 aa26.44■■□□□ 1.82
SRM-202ENST00000459997 ZNF408Q9H9D4 720 aa26.44■■□□□ 1.82
SRM-202ENST00000459997 TLL2Q9Y6L7 1015 aa26.44■■□□□ 1.82
SRM-202ENST00000459997 WDR33Q9C0J8 1336 aaKnown RBP26.43■■□□□ 1.82
SRM-202ENST00000459997 KCNJ4P48050 445 aa26.43■■□□□ 1.82
SRM-202ENST00000459997 PAXIP1Q6ZW49 1069 aaPredicted RBP26.43■■□□□ 1.82
SRM-202ENST00000459997 TXNRD3Q86VQ6 643 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms