RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
SCNM1-203ENST00000459799 RSPH6AQ9H0K4 717 aa12.05□□□□□ -0.48
SCNM1-203ENST00000459799 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
SCNM1-203ENST00000459799 UNC80Q8N2C7 3258 aa12.04□□□□□ -0.48
SCNM1-203ENST00000459799 ECE2O60344 883 aa12.04□□□□□ -0.48
SCNM1-203ENST00000459799 GRAPQ13588 217 aa12.04□□□□□ -0.48
SCNM1-203ENST00000459799 PARP10Q53GL7 1025 aa12.04□□□□□ -0.48
SCNM1-203ENST00000459799 ANGEL2Q5VTE6 544 aaKnown RBP12.04□□□□□ -0.48
SCNM1-203ENST00000459799 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
SCNM1-203ENST00000459799 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
SCNM1-203ENST00000459799 MYL6BP14649 208 aa12.03□□□□□ -0.48
SCNM1-203ENST00000459799 EN2P19622 333 aaPredicted RBP12.03□□□□□ -0.48
SCNM1-203ENST00000459799 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
SCNM1-203ENST00000459799 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
SCNM1-203ENST00000459799 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
SCNM1-203ENST00000459799 UBE2Q2LH0YL09 131 aa12.02□□□□□ -0.49
SCNM1-203ENST00000459799 ARMC5Q96C12 935 aa12.02□□□□□ -0.49
SCNM1-203ENST00000459799 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
SCNM1-203ENST00000459799 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
SCNM1-203ENST00000459799 RRP7AQ9Y3A4 280 aaKnown RBP12.02□□□□□ -0.49
SCNM1-203ENST00000459799 TRIM17Q9Y577 477 aa12.02□□□□□ -0.49
SCNM1-203ENST00000459799 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
SCNM1-203ENST00000459799 VIL1P09327 827 aaKnown RBP12.01□□□□□ -0.49
SCNM1-203ENST00000459799 HCLS1P14317 486 aaPredicted RBP12.01□□□□□ -0.49
SCNM1-203ENST00000459799 ZNF280AP59817 542 aaPredicted RBP12.01□□□□□ -0.49
SCNM1-203ENST00000459799 SREBF2Q12772 1141 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 MKRN3Q13064 507 aaKnown RBP12.01□□□□□ -0.49
SCNM1-203ENST00000459799 SCARF1Q14162 830 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
SCNM1-203ENST00000459799 TMC4Q7Z404 712 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 LRP10Q7Z4F1 713 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 SLC17A8Q8NDX2 589 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 RTF1Q92541 710 aaKnown RBP12.01□□□□□ -0.49
SCNM1-203ENST00000459799 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 POLLQ9UGP5 575 aa12.01□□□□□ -0.49
SCNM1-203ENST00000459799 SCAF8Q9UPN6 1271 aaKnown RBP12.01□□□□□ -0.49
SCNM1-203ENST00000459799 RIMBP2O15034 1052 aa12□□□□□ -0.49
SCNM1-203ENST00000459799 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
SCNM1-203ENST00000459799 DOK7Q18PE1 504 aa12□□□□□ -0.49
SCNM1-203ENST00000459799 H0YGN5 161 aa11.99□□□□□ -0.49
SCNM1-203ENST00000459799 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
SCNM1-203ENST00000459799 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
SCNM1-203ENST00000459799 PRAMEF18Q5VWM3 479 aa11.99□□□□□ -0.49
SCNM1-203ENST00000459799 NSFL1CQ9UNZ2 370 aaKnown RBP11.99□□□□□ -0.49
SCNM1-203ENST00000459799 PTPN22Q9Y2R2 807 aa11.99□□□□□ -0.49
SCNM1-203ENST00000459799 ERBB4Q15303 1308 aa11.98□□□□□ -0.49
SCNM1-203ENST00000459799 PER1O15534 1290 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-203ENST00000459799 GPSM2P81274 684 aa11.98□□□□□ -0.49
SCNM1-203ENST00000459799 C6orf229H3BNL8 230 aa11.97□□□□□ -0.49
SCNM1-203ENST00000459799 HTATSF1O43719 755 aaKnown RBP11.97□□□□□ -0.49
SCNM1-203ENST00000459799 ALDH1A1P00352 501 aa11.97□□□□□ -0.49
SCNM1-203ENST00000459799 EIF4A1P60842 406 aaKnown RBP11.97□□□□□ -0.49
SCNM1-203ENST00000459799 CAP1Q01518 475 aa11.97□□□□□ -0.49
SCNM1-203ENST00000459799 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
SCNM1-203ENST00000459799 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
SCNM1-203ENST00000459799 GMLQ99445 158 aa11.97□□□□□ -0.49
SCNM1-203ENST00000459799 MYOZ2Q9NPC6 264 aa11.97□□□□□ -0.49
SCNM1-203ENST00000459799 SH3TC1Q8TE82 1336 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 PTPN12Q05209 780 aaKnown RBP11.96□□□□□ -0.49
SCNM1-203ENST00000459799 TTLL12Q14166 644 aaPredicted RBP11.96□□□□□ -0.49
SCNM1-203ENST00000459799 PDIA6Q15084 440 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 SPRYD7Q5W111 196 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.49
SCNM1-203ENST00000459799 AGBL3Q8NEM8 1001 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 TBC1D16Q8TBP0 767 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 CD99L2Q8TCZ2 262 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 ZNF333Q96JL9 665 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 EYA3Q99504 573 aa11.96□□□□□ -0.49
SCNM1-203ENST00000459799 THUMPD2Q9BTF0 503 aaKnown RBP11.96□□□□□ -0.49
SCNM1-203ENST00000459799 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
SCNM1-203ENST00000459799 IGF2BP3O00425 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCNM1-203ENST00000459799 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
SCNM1-203ENST00000459799 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
SCNM1-203ENST00000459799 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
SCNM1-203ENST00000459799 TIMELESSQ9UNS1 1208 aa11.95□□□□□ -0.5
SCNM1-203ENST00000459799 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
SCNM1-203ENST00000459799 OTOFQ9HC10 1997 aa11.94□□□□□ -0.5
SCNM1-203ENST00000459799 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
SCNM1-203ENST00000459799 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
SCNM1-203ENST00000459799 TCIRG1Q13488 830 aa11.94□□□□□ -0.5
SCNM1-203ENST00000459799 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
SCNM1-203ENST00000459799 NBPF9Q3BBW0 867 aa11.94□□□□□ -0.5
SCNM1-203ENST00000459799 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
SCNM1-203ENST00000459799 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
SCNM1-203ENST00000459799 ECM29Q5VYK3 1845 aa11.93□□□□□ -0.5
SCNM1-203ENST00000459799 SSC5DA1L4H1 1573 aa11.93□□□□□ -0.5
SCNM1-203ENST00000459799 LDLRAD1Q5T700 205 aa11.93□□□□□ -0.5
SCNM1-203ENST00000459799 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
SCNM1-203ENST00000459799 MANSC4A6NHS7 340 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-203ENST00000459799 HAX1O00165 279 aa11.92□□□□□ -0.5
SCNM1-203ENST00000459799 ANXA1P04083 346 aa11.92□□□□□ -0.5
SCNM1-203ENST00000459799 NF2P35240 595 aa11.92□□□□□ -0.5
SCNM1-203ENST00000459799 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-203ENST00000459799 SF3B3Q15393 1217 aaKnown RBP11.92□□□□□ -0.5
SCNM1-203ENST00000459799 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
SCNM1-203ENST00000459799 PNISRQ8TF01 805 aaKnown RBP11.92□□□□□ -0.5
SCNM1-203ENST00000459799 ZNF428Q96B54 188 aa11.92□□□□□ -0.5
SCNM1-203ENST00000459799 ZC3H12CQ9C0D7 883 aaKnown RBP11.92□□□□□ -0.5
SCNM1-203ENST00000459799 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms