RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 TSHZ2Q9NRE2 1034 aa12.87□□□□□ -0.35
NEDD9-205ENST00000459670 PSME4Q14997 1843 aa12.86□□□□□ -0.35
NEDD9-205ENST00000459670 HOXA10P31260 410 aaPredicted RBP12.86□□□□□ -0.35
NEDD9-205ENST00000459670 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
NEDD9-205ENST00000459670 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
NEDD9-205ENST00000459670 ZBTB22O15209 634 aa12.85□□□□□ -0.35
NEDD9-205ENST00000459670 TSHZ3Q63HK5 1081 aa12.85□□□□□ -0.35
NEDD9-205ENST00000459670 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
NEDD9-205ENST00000459670 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
NEDD9-205ENST00000459670 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
NEDD9-205ENST00000459670 CHD4Q14839 1912 aa12.84□□□□□ -0.35
NEDD9-205ENST00000459670 MMP10P09238 476 aa12.84□□□□□ -0.35
NEDD9-205ENST00000459670 SLC51AQ86UW1 340 aa12.84□□□□□ -0.35
NEDD9-205ENST00000459670 AACSQ86V21 672 aa12.84□□□□□ -0.35
NEDD9-205ENST00000459670 SLC16A10Q8TF71 515 aa12.84□□□□□ -0.35
NEDD9-205ENST00000459670 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
NEDD9-205ENST00000459670 BSDC1Q9NW68 430 aaPredicted RBP12.84□□□□□ -0.35
NEDD9-205ENST00000459670 MROH5Q6ZUA9 1318 aa12.84□□□□□ -0.35
NEDD9-205ENST00000459670 COL1A1P02452 1464 aaPredicted RBP12.84□□□□□ -0.35
NEDD9-205ENST00000459670 RFX7Q2KHR2 1363 aa12.83□□□□□ -0.36
NEDD9-205ENST00000459670 PDE8BO95263 885 aa12.83□□□□□ -0.36
NEDD9-205ENST00000459670 SDSP20132 328 aa12.83□□□□□ -0.36
NEDD9-205ENST00000459670 OS9Q13438 667 aaPredicted RBP12.83□□□□□ -0.36
NEDD9-205ENST00000459670 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
NEDD9-205ENST00000459670 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
NEDD9-205ENST00000459670 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
NEDD9-205ENST00000459670 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
NEDD9-205ENST00000459670 ARFGEF1Q9Y6D6 1849 aa12.83□□□□□ -0.36
NEDD9-205ENST00000459670 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
NEDD9-205ENST00000459670 ATP5JP18859 108 aa12.82□□□□□ -0.36
NEDD9-205ENST00000459670 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
NEDD9-205ENST00000459670 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEDD9-205ENST00000459670 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
NEDD9-205ENST00000459670 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
NEDD9-205ENST00000459670 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
NEDD9-205ENST00000459670 ECHDC1Q9NTX5 307 aa12.82□□□□□ -0.36
NEDD9-205ENST00000459670 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
NEDD9-205ENST00000459670 ZNF804BA4D1E1 1349 aa12.82□□□□□ -0.36
NEDD9-205ENST00000459670 GLRX3O76003 335 aaKnown RBP12.81□□□□□ -0.36
NEDD9-205ENST00000459670 ADORA1P30542 326 aa12.81□□□□□ -0.36
NEDD9-205ENST00000459670 ST5P78524 1137 aa12.81□□□□□ -0.36
NEDD9-205ENST00000459670 GRAPQ13588 217 aa12.81□□□□□ -0.36
NEDD9-205ENST00000459670 GRAPLQ8TC17 118 aaPredicted RBP12.81□□□□□ -0.36
NEDD9-205ENST00000459670 ZNF512BQ96KM6 892 aaPredicted RBP12.81□□□□□ -0.36
NEDD9-205ENST00000459670 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
NEDD9-205ENST00000459670 SEC24BO95487 1268 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 SRGNP10124 158 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 CHRNDQ07001 517 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 ATP2B3Q16720 1220 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 MINPP1Q9UNW1 487 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
NEDD9-205ENST00000459670 LAMA4Q16363 1823 aa12.79□□□□□ -0.36
NEDD9-205ENST00000459670 IFIT2P09913 472 aaKnown RBP12.79□□□□□ -0.36
NEDD9-205ENST00000459670 ARID4AP29374 1257 aaPredicted RBP12.79□□□□□ -0.36
NEDD9-205ENST00000459670 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
NEDD9-205ENST00000459670 TIMM10P62072 90 aa12.79□□□□□ -0.36
NEDD9-205ENST00000459670 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
NEDD9-205ENST00000459670 PUM3Q15397 648 aaKnown RBP12.79□□□□□ -0.36
NEDD9-205ENST00000459670 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
NEDD9-205ENST00000459670 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
NEDD9-205ENST00000459670 XAGE2Q96GT9 111 aa12.79□□□□□ -0.36
NEDD9-205ENST00000459670 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
NEDD9-205ENST00000459670 CDK5RAP2Q96SN8 1893 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 SNAP23O00161 211 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-205ENST00000459670 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 LPIN2Q92539 896 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 HAUS7Q99871 368 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 IL25Q9H293 177 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-205ENST00000459670 AKAP2Q9Y2D5 859 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
NEDD9-205ENST00000459670 WTIPA6NIX2 430 aaPredicted RBP12.77□□□□□ -0.37
NEDD9-205ENST00000459670 ERC2O15083 957 aa12.77□□□□□ -0.37
NEDD9-205ENST00000459670 CDC45O75419 566 aa12.77□□□□□ -0.37
NEDD9-205ENST00000459670 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
NEDD9-205ENST00000459670 SCARF1Q14162 830 aa12.77□□□□□ -0.37
NEDD9-205ENST00000459670 C15orf52Q6ZUT6 534 aaKnown RBP12.77□□□□□ -0.37
NEDD9-205ENST00000459670 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
NEDD9-205ENST00000459670 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
NEDD9-205ENST00000459670 MED23Q9ULK4 1368 aa12.77□□□□□ -0.37
NEDD9-205ENST00000459670 TAF5LO75529 589 aa12.76□□□□□ -0.37
NEDD9-205ENST00000459670 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
NEDD9-205ENST00000459670 HELBQ8NG08 1087 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-205ENST00000459670 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
NEDD9-205ENST00000459670 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
NEDD9-205ENST00000459670 MSH5O43196 834 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 NPR1P16066 1061 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 CHMLP26374 656 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 KLRK1P26718 216 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 PDE6BP35913 854 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 PTGER2P43116 358 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 MCAMP43121 646 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 PHKA1P46020 1223 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
NEDD9-205ENST00000459670 FOCADQ5VW36 1801 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms