RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 SMARCA5O60264 1052 aaPredicted RBP10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 GLRX3O76003 335 aaKnown RBP10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 IFIT2P09913 472 aaKnown RBP10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 BAG6P46379 1132 aa10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 SF3B3Q15393 1217 aaKnown RBP10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 RTL5Q5HYW3 569 aaPredicted RBP10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 IER5LQ5T953 404 aa10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 JARID2Q92833 1246 aaPredicted RBP10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 TFCP2L1Q9NZI6 479 aa10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 PA2G4Q9UQ80 394 aaKnown RBP10.93□□□□□ -0.66
CDC42EP3-204ENST00000457889 QSER1Q2KHR3 1735 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 DDX60Q8IY21 1712 aaKnown RBP10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 PHF14O94880 888 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 SASH1O94885 1247 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 GYS1P13807 737 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 ITGA6P23229 1130 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 CASC1Q6TDU7 716 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 TICAM2Q86XR7 235 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 NLGN1Q8N2Q7 840 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 CAMKK2Q96RR4 588 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 CDC5LQ99459 802 aaKnown RBP10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 SIL1Q9H173 461 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 IL1RAPL2Q9NP60 686 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 ECHDC1Q9NTX5 307 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 SRP68Q9UHB9 627 aaKnown RBP10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 AKAP2Q9Y2D5 859 aa10.92□□□□□ -0.66
CDC42EP3-204ENST00000457889 ABCC12Q96J65 1359 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 CDC45O75419 566 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 ATG9AQ7Z3C6 839 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 AACSQ86V21 672 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 AMIGO3Q86WK7 504 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 CNBD1Q8NA66 436 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 GREM2Q9H772 168 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 UPF2Q9HAU5 1272 aaKnown RBP10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 CEP126Q9P2H0 1117 aa10.91□□□□□ -0.66
CDC42EP3-204ENST00000457889 MROH5Q6ZUA9 1318 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 GSPT1P15170 499 aaKnown RBP10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 IGHMBP2P38935 993 aaKnown RBP10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 NFIXQ14938 502 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 TNNI3KQ59H18 835 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 KLHDC4Q8TBB5 520 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 OTUD7AQ8TE49 926 aaPredicted RBP10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 STK32BQ9NY57 414 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 PCDH10Q9P2E7 1040 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 FPGT-TNNI3KV9GXZ4 949 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 ZNF609O15014 1411 aa10.9□□□□□ -0.66
CDC42EP3-204ENST00000457889 NPHP1O15259 732 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 HCLS1P14317 486 aaPredicted RBP10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 TM4SF1P30408 202 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 ST5P78524 1137 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 TFCP2Q12800 502 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 ZNF827Q17R98 1081 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 ERFEQ4G0M1 354 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 LDHAL6AQ6ZMR3 332 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 SYNE4Q8N205 404 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 SLAIN1Q8ND83 568 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 EAF2Q96CJ1 260 aaPredicted RBP10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 RIPOR2Q9Y4F9 1068 aa10.89□□□□□ -0.67
CDC42EP3-204ENST00000457889 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 CNTROBQ8N137 903 aa10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 PI4K2BQ8TCG2 481 aa10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 TUBGCP6Q96RT7 1819 aa10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 RFX7Q2KHR2 1363 aa10.88□□□□□ -0.67
CDC42EP3-204ENST00000457889 PNPLA7Q6ZV29 1317 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 HIP1O00291 1037 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 PLCG2P16885 1265 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 ATP5JP18859 108 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 SDSP20132 328 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 METTL24Q5JXM2 366 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 ANKRD18AQ8IVF6 992 aa10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 BSDC1Q9NW68 430 aaPredicted RBP10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 RBM19Q9Y4C8 960 aaKnown RBP10.87□□□□□ -0.67
CDC42EP3-204ENST00000457889 POLRMTO00411 1230 aaKnown RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 EPB41L2O43491 1005 aaKnown RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 PDE8BO95263 885 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 SERPINB2P05120 415 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 PUM3Q15397 648 aaKnown RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 EZH2Q15910 746 aaKnown RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 ATP2B3Q16720 1220 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 CRY2Q49AN0 593 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 PRR5LQ6MZQ0 368 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 TBC1D9Q6ZT07 1266 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 ILDR1Q86SU0 546 aaPredicted RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 COL23A1Q86Y22 540 aaPredicted RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 VGLL2Q8N8G2 317 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms