RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 FMR1NBQ8N0W7 255 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 DTWD1Q8N5C7 304 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 FAM200AQ8TCP9 573 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 NUDT8Q8WV74 236 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 VTI1AQ96AJ9 217 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 LPIN3Q9BQK8 851 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 IGFLR1Q9H665 355 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 ZFATQ9P243 1243 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 MARCH6O60337 910 aa5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 HOXD8P13378 290 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 TCF3P15923 654 aa5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 ELOAQ14241 798 aaKnown RBP5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 GRIK5Q16478 980 aa5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 UBXN4Q92575 508 aa5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 TTC9Q92623 222 aa5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 IFT43Q96FT9 208 aa5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 HIRIP3Q9BW71 556 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 LRFN2Q9ULH4 789 aa5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 NOVA2Q9UNW9 492 aaKnown RBP5.53□□□□□ -1.52
HMGB3P30-201ENST00000457863 H2AFB1P0C5Y9 115 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 H2AFB2P0C5Z0 115 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 RARAP10276 462 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 ARID4AP29374 1257 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 NRLP54845 237 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 SRPK2P78362 688 aaKnown RBP5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 FKBP5Q13451 457 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 PERM1Q5SV97 790 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 ZMYM1Q5SVZ6 1142 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 MSL1Q68DK7 614 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 TEX2Q8IWB9 1127 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 ZMIZ1Q9ULJ6 1067 aa5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 RTCBQ9Y3I0 505 aaKnown RBP5.52□□□□□ -1.53
HMGB3P30-201ENST00000457863 ZBTB42B2RXF5 422 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 OPLAHO14841 1288 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 CPB1P15086 417 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 ERCC3P19447 782 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 TARSP26639 723 aaKnown RBP5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 SOX18P35713 384 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 OCLNQ16625 522 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 TREML1Q86YW5 311 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 EXOC8Q8IYI6 725 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 COL26A1Q96A83 441 aa5.51□□□□□ -1.53
HMGB3P30-201ENST00000457863 CARNS1A5YM72 827 aa5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 ZNF16P17020 682 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 RFX1P22670 979 aa5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 FOXD4L6Q3SYB3 417 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 COX20Q5RI15 118 aa5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 ELMSAN1Q6PJG2 1045 aa5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 SHISA2Q6UWI4 295 aa5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 FOXD4L3Q6VB84 417 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 KRT25Q7Z3Z0 450 aa5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 FBXO11Q86XK2 927 aa5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 DMRTC2Q8IXT2 367 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 SSBP4Q9BWG4 385 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 TLR7Q9NYK1 1049 aaKnown RBP5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 GNEQ9Y223 722 aaKnown RBP5.5□□□□□ -1.53
HMGB3P30-201ENST00000457863 XYLBO75191 536 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 SASH3O75995 380 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 FGD1P98174 961 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 FAM69CQ0P6D2 419 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 PRSS36Q5K4E3 855 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 GIMAP6Q6P9H5 292 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 MYH16Q9H6N6 1097 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 PPME1Q9Y570 386 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 KCNMB2Q9Y691 235 aa5.49□□□□□ -1.53
HMGB3P30-201ENST00000457863 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 ZC3H6P61129 1189 aaKnown RBP5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 SETQ01105 290 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 MLLT1Q03111 559 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 PLAURQ03405 335 aa5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 C16orf46Q6P387 395 aa5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 WFDC8Q8IUA0 241 aa5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 ETFBKMTQ8IXQ9 262 aa5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 RGL4Q8IZJ4 473 aa5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 STK32AQ8WU08 396 aa5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 SRA1Q9HD15 236 aaKnown RBP5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 SUGT1Q9Y2Z0 365 aa5.48□□□□□ -1.53
HMGB3P30-201ENST00000457863 TPD52L2O43399 206 aaKnown RBP5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 PRMT3O60678 531 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 ATG7O95352 703 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 EIF2AK2P19525 551 aaKnown RBP5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 CDCA8Q53HL2 280 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 DNAJC14Q6Y2X3 702 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 ZNF662Q6ZS27 426 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 PKNOX2Q96KN3 472 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 PRIMPOLQ96LW4 560 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 SMG9Q9H0W8 520 aaKnown RBP5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 CXXC1Q9P0U4 656 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 PPP1R1BQ9UD71 204 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 USP21Q9UK80 565 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 USP20Q9Y2K6 914 aa5.47□□□□□ -1.53
HMGB3P30-201ENST00000457863 DLL1O00548 723 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 TNFRSF10BO14763 440 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 MAFGO15525 162 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 MMP20O60882 483 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 DEAF1O75398 565 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 PSAPP07602 524 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 TRIP4Q15650 581 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 HSP90AB4PQ58FF6 505 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms