RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 NEXMIFQ5QGS0 1516 aa19.09■□□□□ 0.65
LSS-205ENST00000457828 TNS3Q68CZ2 1445 aa19.08■□□□□ 0.65
LSS-205ENST00000457828 TERF1P54274 439 aa19.08■□□□□ 0.64
LSS-205ENST00000457828 LUZP1Q86V48 1076 aa19.08■□□□□ 0.64
LSS-205ENST00000457828 FAM200AQ8TCP9 573 aa19.08■□□□□ 0.64
LSS-205ENST00000457828 RBM8AQ9Y5S9 174 aaKnown RBP19.08■□□□□ 0.64
LSS-205ENST00000457828 PTCH1Q13635 1447 aa19.08■□□□□ 0.64
LSS-205ENST00000457828 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
LSS-205ENST00000457828 ZNF853P0CG23 659 aa19.07■□□□□ 0.64
LSS-205ENST00000457828 TNNT3P45378 269 aaPredicted RBP19.07■□□□□ 0.64
LSS-205ENST00000457828 PIBF1Q8WXW3 757 aa19.07■□□□□ 0.64
LSS-205ENST00000457828 SNX14Q9Y5W7 946 aa19.07■□□□□ 0.64
LSS-205ENST00000457828 SH3TC1Q8TE82 1336 aa19.07■□□□□ 0.64
LSS-205ENST00000457828 CCDC94Q9BW85 323 aaPredicted RBP19.07■□□□□ 0.64
LSS-205ENST00000457828 CLSTN1O94985 981 aa19.06■□□□□ 0.64
LSS-205ENST00000457828 PTPN14Q15678 1187 aa19.06■□□□□ 0.64
LSS-205ENST00000457828 EVI5LQ96CN4 794 aa19.06■□□□□ 0.64
LSS-205ENST00000457828 JCADQ9P266 1359 aa19.06■□□□□ 0.64
LSS-205ENST00000457828 MAP3K12Q12852 859 aa19.06■□□□□ 0.64
LSS-205ENST00000457828 ZNF396Q96N95 335 aaPredicted RBP19.06■□□□□ 0.64
LSS-205ENST00000457828 PTPRUQ92729 1446 aa19.06■□□□□ 0.64
LSS-205ENST00000457828 FAM177A1Q8N128 213 aaPredicted RBP19.06■□□□□ 0.64
LSS-205ENST00000457828 TULP4Q9NRJ4 1543 aa19.06■□□□□ 0.64
LSS-205ENST00000457828 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
LSS-205ENST00000457828 DDX19AQ9NUU7 478 aaKnown RBP19.05■□□□□ 0.64
LSS-205ENST00000457828 TYRO3Q06418 890 aa19.05■□□□□ 0.64
LSS-205ENST00000457828 METTL22Q9BUU2 404 aaPredicted RBP19.05■□□□□ 0.64
LSS-205ENST00000457828 LRRC2Q9BYS8 371 aa19.05■□□□□ 0.64
LSS-205ENST00000457828 DNAJC25Q9H1X3 360 aa19.05■□□□□ 0.64
LSS-205ENST00000457828 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
LSS-205ENST00000457828 ATP2B3Q16720 1220 aa19.05■□□□□ 0.64
LSS-205ENST00000457828 GOLIM4O00461 696 aa19.04■□□□□ 0.64
LSS-205ENST00000457828 PDILTQ8N807 584 aa19.04■□□□□ 0.64
LSS-205ENST00000457828 MYRIPQ8NFW9 859 aa19.04■□□□□ 0.64
LSS-205ENST00000457828 ZC3H13Q5T200 1668 aaKnown RBP19.04■□□□□ 0.64
LSS-205ENST00000457828 SGSM2O43147 1006 aa19.04■□□□□ 0.64
LSS-205ENST00000457828 ZDHHC9Q9Y397 364 aa19.04■□□□□ 0.64
LSS-205ENST00000457828 SPATA31D1Q6ZQQ2 1576 aa19.03■□□□□ 0.64
LSS-205ENST00000457828 CCT2P78371 535 aaKnown RBP19.03■□□□□ 0.64
LSS-205ENST00000457828 KRT32Q14532 448 aa19.03■□□□□ 0.64
LSS-205ENST00000457828 PARP10Q53GL7 1025 aa19.03■□□□□ 0.64
LSS-205ENST00000457828 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
LSS-205ENST00000457828 ERICH4A6NGS2 130 aa19.03■□□□□ 0.64
LSS-205ENST00000457828 CYP27B1O15528 508 aa19.03■□□□□ 0.64
LSS-205ENST00000457828 MSL1Q68DK7 614 aa19.03■□□□□ 0.64
LSS-205ENST00000457828 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.03■□□□□ 0.64
LSS-205ENST00000457828 V9GYY5 206 aaPredicted RBP19.03■□□□□ 0.64
LSS-205ENST00000457828 HSPA4P34932 840 aa19.02■□□□□ 0.64
LSS-205ENST00000457828 DDIT3P35638 169 aa19.02■□□□□ 0.64
LSS-205ENST00000457828 USP5P45974 858 aa19.02■□□□□ 0.64
LSS-205ENST00000457828 MINDY4BA8MYZ0 360 aa19.02■□□□□ 0.64
LSS-205ENST00000457828 ARGLU1Q9NWB6 273 aaPredicted RBP19.02■□□□□ 0.64
LSS-205ENST00000457828 IL15P40933 162 aaPredicted RBP19.02■□□□□ 0.63
LSS-205ENST00000457828 TTLL7Q6ZT98 887 aa19.02■□□□□ 0.63
LSS-205ENST00000457828 RAD50Q92878 1312 aa19.01■□□□□ 0.63
LSS-205ENST00000457828 NBPF7P0C2Y1 421 aaPredicted RBP19.01■□□□□ 0.63
LSS-205ENST00000457828 BICC1Q9H694 974 aaKnown RBP19.01■□□□□ 0.63
LSS-205ENST00000457828 THRAP3Q9Y2W1 955 aaKnown RBP19.01■□□□□ 0.63
LSS-205ENST00000457828 CCDC191Q8NCU4 936 aa19.01■□□□□ 0.63
LSS-205ENST00000457828 ZC3H12CQ9C0D7 883 aaKnown RBP19.01■□□□□ 0.63
LSS-205ENST00000457828 IQSEC2Q5JU85 1478 aa19.01■□□□□ 0.63
LSS-205ENST00000457828 RIOK3O14730 519 aaKnown RBP19■□□□□ 0.63
LSS-205ENST00000457828 ATP2B1P20020 1258 aa19■□□□□ 0.63
LSS-205ENST00000457828 PIGBQ92521 554 aa19■□□□□ 0.63
LSS-205ENST00000457828 CCDC34Q96HJ3 373 aa19■□□□□ 0.63
LSS-205ENST00000457828 CTNNA3Q9UI47 895 aa19■□□□□ 0.63
LSS-205ENST00000457828 PDIA4P13667 645 aaKnown RBP19■□□□□ 0.63
LSS-205ENST00000457828 NMIQ13287 307 aaPredicted RBP19■□□□□ 0.63
LSS-205ENST00000457828 SERPINC1P01008 464 aa19■□□□□ 0.63
LSS-205ENST00000457828 CREB3L3Q68CJ9 461 aa18.99■□□□□ 0.63
LSS-205ENST00000457828 BRF1Q92994 677 aa18.99■□□□□ 0.63
LSS-205ENST00000457828 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
LSS-205ENST00000457828 BIN1O00499 593 aa18.99■□□□□ 0.63
LSS-205ENST00000457828 PES1O00541 588 aaKnown RBP18.99■□□□□ 0.63
LSS-205ENST00000457828 GJD4Q96KN9 370 aaPredicted RBP18.99■□□□□ 0.63
LSS-205ENST00000457828 USP44Q9H0E7 712 aa18.99■□□□□ 0.63
LSS-205ENST00000457828 POLR3DP05423 398 aaPredicted RBP18.99■□□□□ 0.63
LSS-205ENST00000457828 TEX35Q5T0J7 233 aa18.99■□□□□ 0.63
LSS-205ENST00000457828 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 CDC42BPGQ6DT37 1551 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 RICTORQ6R327 1708 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 RBM6P78332 1123 aaKnown RBP18.98■□□□□ 0.63
LSS-205ENST00000457828 RASEFQ8IZ41 740 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 KIF18AQ8NI77 898 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 PRAMEF22A3QJZ6 481 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 F8W031 263 aaPredicted RBP18.98■□□□□ 0.63
LSS-205ENST00000457828 CLEC17AQ6ZS10 378 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 FSIP1Q8NA03 581 aa18.98■□□□□ 0.63
LSS-205ENST00000457828 CRKLP46109 303 aaKnown RBP18.97■□□□□ 0.63
LSS-205ENST00000457828 CEP135Q66GS9 1140 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 NAPBQ9H115 298 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 CGNQ9P2M7 1197 aaKnown RBP18.97■□□□□ 0.63
LSS-205ENST00000457828 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 U2AF2P26368 475 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■□□□□ 9.5
LSS-205ENST00000457828 CUL4AQ13619 759 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 SAFBQ15424 915 aaKnown RBP eCLIP18.97■□□□□ 0.63
LSS-205ENST00000457828 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 KLHDC4Q8TBB5 520 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 NEK1Q96PY6 1258 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 ANO10Q9NW15 660 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms