RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DTNBO60941 627 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 HSP90AB3PQ58FF7 597 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 USP48Q86UV5 1035 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 MTMR6Q9Y217 621 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 CYP19A1P11511 503 aaPredicted RBP19.88■□□□□ 0.77
CCDC43-202ENST00000457422 HLFQ16534 295 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 ZMYM1Q5SVZ6 1142 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 SYAP1Q96A49 352 aaPredicted RBP19.88■□□□□ 0.77
CCDC43-202ENST00000457422 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
CCDC43-202ENST00000457422 AKAP2Q9Y2D5 859 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 NUP98P52948 1817 aa19.88■□□□□ 0.77
CCDC43-202ENST00000457422 DOT1LQ8TEK3 1739 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 EXOC5O00471 708 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 IFIT1P09914 478 aaKnown RBP19.87■□□□□ 0.77
CCDC43-202ENST00000457422 PRIM1P49642 420 aaKnown RBP19.87■□□□□ 0.77
CCDC43-202ENST00000457422 CCDC173Q0VFZ6 552 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 PPP1R9BQ96SB3 815 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 DSCC1Q9BVC3 393 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 LAMA4Q16363 1823 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 SLFNL1Q499Z3 407 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 NEK1Q96PY6 1258 aa19.87■□□□□ 0.77
CCDC43-202ENST00000457422 CYP21A2P08686 494 aa19.86■□□□□ 0.77
CCDC43-202ENST00000457422 GPTP24298 496 aa19.86■□□□□ 0.77
CCDC43-202ENST00000457422 NLRP10Q86W26 655 aa19.86■□□□□ 0.77
CCDC43-202ENST00000457422 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
CCDC43-202ENST00000457422 ZBTB1Q9Y2K1 713 aa19.86■□□□□ 0.77
CCDC43-202ENST00000457422 GADD45BO75293 160 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-202ENST00000457422 SYNE4Q8N205 404 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 RRAGDQ9NQL2 400 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-202ENST00000457422 CNPY2Q9Y2B0 182 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 NRAPQ86VF7 1730 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 ABCC12Q96J65 1359 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 SYCE3A1L190 88 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 IFIT5Q13325 482 aaKnown RBP19.85■□□□□ 0.77
CCDC43-202ENST00000457422 TAF7LQ5H9L4 462 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 RBSNQ9H1K0 784 aa19.85■□□□□ 0.77
CCDC43-202ENST00000457422 PDCP20941 246 aa19.84■□□□□ 0.77
CCDC43-202ENST00000457422 ADORA1P30542 326 aa19.84■□□□□ 0.77
CCDC43-202ENST00000457422 ANP32BQ92688 251 aaKnown RBP19.84■□□□□ 0.77
CCDC43-202ENST00000457422 RIC1Q4ADV7 1423 aa19.84■□□□□ 0.77
CCDC43-202ENST00000457422 RNF113AO15541 343 aaKnown RBP19.83■□□□□ 0.77
CCDC43-202ENST00000457422 CCDC158Q5M9N0 1113 aa19.83■□□□□ 0.77
CCDC43-202ENST00000457422 CDCA7Q9BWT1 371 aaPredicted RBP19.83■□□□□ 0.77
CCDC43-202ENST00000457422 ERVV-1B6SEH8 477 aa19.83■□□□□ 0.76
CCDC43-202ENST00000457422 PHF14O94880 888 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 HMGB1P09429 215 aaKnown RBP19.82■□□□□ 0.76
CCDC43-202ENST00000457422 IL6STP40189 918 aaPredicted RBP19.82■□□□□ 0.76
CCDC43-202ENST00000457422 UBE2HP62256 183 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 CSPP1Q1MSJ5 1256 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 LRRFIP1Q32MZ4 808 aaKnown RBP19.82■□□□□ 0.76
CCDC43-202ENST00000457422 XAGE2Q96GT9 111 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 MYH7P12883 1935 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 MAST3O60307 1309 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 TTC39AQ5SRH9 613 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 LARP1BQ659C4 914 aaKnown RBP19.82■□□□□ 0.76
CCDC43-202ENST00000457422 TTLL11Q8NHH1 800 aa19.82■□□□□ 0.76
CCDC43-202ENST00000457422 VPS37CA5D8V6 355 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-202ENST00000457422 CICQ96RK0 1608 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-202ENST00000457422 HSPD1P10809 573 aaKnown RBP19.8■□□□□ 0.76
CCDC43-202ENST00000457422 CTSWP56202 376 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 GORABQ5T7V8 394 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 STOX1Q6ZVD7 989 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 KLHL34Q8N239 644 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 GTF3C6Q969F1 213 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 TRIM44Q96DX7 344 aaPredicted RBP19.8■□□□□ 0.76
CCDC43-202ENST00000457422 GREM2Q9H772 168 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 RIPOR2Q9Y4F9 1068 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 LRP5O75197 1615 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 ZFYP08048 801 aaPredicted RBP19.8■□□□□ 0.76
CCDC43-202ENST00000457422 STK3Q13188 491 aa19.8■□□□□ 0.76
CCDC43-202ENST00000457422 THRAP3Q9Y2W1 955 aaKnown RBP19.8■□□□□ 0.76
CCDC43-202ENST00000457422 RREB1Q92766 1687 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 FIBPO43427 364 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 ADAMTS2O95450 1211 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 ITGA6P23229 1130 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 FKBP4Q02790 459 aaKnown RBP eCLIP19.79■□□□□ 0.76
CCDC43-202ENST00000457422 Q6ZUG5 572 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 AKAP11Q9UKA4 1901 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 M0R2C6 588 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 IRS4O14654 1257 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-202ENST00000457422 DNM1Q05193 864 aaKnown RBP19.79■□□□□ 0.76
CCDC43-202ENST00000457422 DZIP3Q86Y13 1208 aaKnown RBP19.79■□□□□ 0.76
CCDC43-202ENST00000457422 AGXT2Q9BYV1 514 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 TBC1D2BQ9UPU7 963 aa19.79■□□□□ 0.76
CCDC43-202ENST00000457422 SCARF1Q14162 830 aa19.78■□□□□ 0.76
CCDC43-202ENST00000457422 METTL24Q5JXM2 366 aa19.78■□□□□ 0.76
CCDC43-202ENST00000457422 CCDC183Q5T5S1 534 aa19.78■□□□□ 0.76
CCDC43-202ENST00000457422 DHX32Q7L7V1 743 aaKnown RBP19.78■□□□□ 0.76
CCDC43-202ENST00000457422 TRMT112Q9UI30 125 aaKnown RBP19.78■□□□□ 0.76
CCDC43-202ENST00000457422 SPATA31A1Q5TZJ5 1347 aa19.78■□□□□ 0.76
CCDC43-202ENST00000457422 ANKRD18BA2A2Z9 1011 aa19.77■□□□□ 0.76
CCDC43-202ENST00000457422 CLCN1P35523 988 aa19.77■□□□□ 0.76
CCDC43-202ENST00000457422 ATP2B3Q16720 1220 aa19.77■□□□□ 0.76
CCDC43-202ENST00000457422 ZNF34Q8IZ26 560 aa19.77■□□□□ 0.76
CCDC43-202ENST00000457422 PDLIM2Q96JY6 352 aa19.77■□□□□ 0.76
CCDC43-202ENST00000457422 ZNF512BQ96KM6 892 aaPredicted RBP19.77■□□□□ 0.76
CCDC43-202ENST00000457422 UBN2Q6ZU65 1347 aa19.77■□□□□ 0.76
CCDC43-202ENST00000457422 PHLPP1O60346 1717 aa19.77■□□□□ 0.76
CCDC43-202ENST00000457422 PDE8AO60658 829 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms