RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 ECE2O60344 883 aa17.16■□□□□ 0.34
SMARCA2-216ENST00000457226 UFL1O94874 794 aa17.16■□□□□ 0.34
SMARCA2-216ENST00000457226 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
SMARCA2-216ENST00000457226 FLIIQ13045 1269 aa17.16■□□□□ 0.34
SMARCA2-216ENST00000457226 COL13A1Q5TAT6 717 aaPredicted RBP17.16■□□□□ 0.34
SMARCA2-216ENST00000457226 MAP2K1Q02750 393 aaPredicted RBP17.15■□□□□ 0.34
SMARCA2-216ENST00000457226 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
SMARCA2-216ENST00000457226 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
SMARCA2-216ENST00000457226 MICALL2Q8IY33 904 aa17.15■□□□□ 0.34
SMARCA2-216ENST00000457226 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
SMARCA2-216ENST00000457226 PSMD14O00487 310 aa17.14■□□□□ 0.33
SMARCA2-216ENST00000457226 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
SMARCA2-216ENST00000457226 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
SMARCA2-216ENST00000457226 TTLL11Q8NHH1 800 aa17.14■□□□□ 0.33
SMARCA2-216ENST00000457226 BSDC1Q9NW68 430 aaPredicted RBP17.14■□□□□ 0.33
SMARCA2-216ENST00000457226 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
SMARCA2-216ENST00000457226 PCNTO95613 3336 aa17.14■□□□□ 0.33
SMARCA2-216ENST00000457226 H7C1W4 665 aa17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 CTCFP49711 727 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 GCKRQ14397 625 aa17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 CWF19L2Q2TBE0 894 aaKnown RBP17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 CCDC85AQ96PX6 553 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 TLL2Q9Y6L7 1015 aa17.13■□□□□ 0.33
SMARCA2-216ENST00000457226 TRAF5O00463 557 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 VAMP4O75379 141 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 CST9Q5W186 159 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 G2E3Q7L622 706 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 PODNQ7Z5L7 613 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 HHIPL1Q96JK4 782 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 PLA2G12BQ9BX93 195 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 ZNF609O15014 1411 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 TAF1P21675 1872 aa17.12■□□□□ 0.33
SMARCA2-216ENST00000457226 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 VIL1P09327 827 aaKnown RBP17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 AGBL3Q8NEM8 1001 aa17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 TRPM4Q8TD43 1214 aa17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 GREM2Q9H772 168 aa17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 WBP1LQ9NX94 342 aa17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
SMARCA2-216ENST00000457226 FAM9BQ8IZU0 186 aa17.1■□□□□ 0.33
SMARCA2-216ENST00000457226 DCPSQ96C86 337 aaKnown RBP17.1■□□□□ 0.33
SMARCA2-216ENST00000457226 CAPNS2Q96L46 248 aa17.1■□□□□ 0.33
SMARCA2-216ENST00000457226 BEGAINQ9BUH8 593 aa17.1■□□□□ 0.33
SMARCA2-216ENST00000457226 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
SMARCA2-216ENST00000457226 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
SMARCA2-216ENST00000457226 COL4A1P02462 1669 aa17.1■□□□□ 0.33
SMARCA2-216ENST00000457226 FOXN1O15353 648 aa17.09■□□□□ 0.33
SMARCA2-216ENST00000457226 MAP2K2P36507 400 aa17.09■□□□□ 0.33
SMARCA2-216ENST00000457226 SAMD7Q7Z3H4 446 aa17.09■□□□□ 0.33
SMARCA2-216ENST00000457226 SAPCD2Q86UD0 394 aa17.09■□□□□ 0.33
SMARCA2-216ENST00000457226 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
SMARCA2-216ENST00000457226 LEMD3Q9Y2U8 911 aa17.09■□□□□ 0.33
SMARCA2-216ENST00000457226 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
SMARCA2-216ENST00000457226 USP17L3A6NCW0 530 aa17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 USP17L4A6NCW7 530 aa17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 MMP14P50281 582 aa17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 TBC1D10BQ4KMP7 808 aaPredicted RBP17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 USP17L1Q7RTZ2 530 aa17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 KRT26Q7Z3Y9 468 aa17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 GPR101Q96P66 508 aaPredicted RBP17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.32
SMARCA2-216ENST00000457226 CSF1RP07333 972 aa17.07■□□□□ 0.32
SMARCA2-216ENST00000457226 CCT4P50991 539 aaKnown RBP17.07■□□□□ 0.32
SMARCA2-216ENST00000457226 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMARCA2-216ENST00000457226 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
SMARCA2-216ENST00000457226 KCNQ5Q9NR82 932 aa17.07■□□□□ 0.32
SMARCA2-216ENST00000457226 MYO3BQ8WXR4 1341 aa17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 SHTN1A0MZ66 631 aa17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 ITGA6P23229 1130 aa17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 SULF1Q8IWU6 871 aa17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
SMARCA2-216ENST00000457226 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
SMARCA2-216ENST00000457226 CA12O43570 354 aa17.05■□□□□ 0.32
SMARCA2-216ENST00000457226 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
SMARCA2-216ENST00000457226 CASP7P55210 303 aa17.05■□□□□ 0.32
SMARCA2-216ENST00000457226 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
SMARCA2-216ENST00000457226 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
SMARCA2-216ENST00000457226 THSD7BQ9C0I4 1608 aa17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 TRPM7Q96QT4 1865 aa17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 KCNJ4P48050 445 aa17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 GRM1Q13255 1194 aa17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 IFIT5Q13325 482 aaKnown RBP17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 OGFOD1Q8N543 542 aa17.04■□□□□ 0.32
SMARCA2-216ENST00000457226 C2orf69Q8N8R5 385 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms