RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 KANK3Q6NY19 840 aa8.76□□□□□ -1.01
LINC00161-202ENST00000455939 ELMSAN1Q6PJG2 1045 aa8.76□□□□□ -1.01
LINC00161-202ENST00000455939 XKR5Q6UX68 686 aa8.76□□□□□ -1.01
LINC00161-202ENST00000455939 ZNF417Q8TAU3 575 aa8.76□□□□□ -1.01
LINC00161-202ENST00000455939 ZNF587Q96SQ5 575 aaPredicted RBP8.76□□□□□ -1.01
LINC00161-202ENST00000455939 RBSNQ9H1K0 784 aa8.76□□□□□ -1.01
LINC00161-202ENST00000455939 JPH1Q9HDC5 661 aaPredicted RBP8.76□□□□□ -1.01
LINC00161-202ENST00000455939 CNTN3Q9P232 1028 aa8.76□□□□□ -1.01
LINC00161-202ENST00000455939 FOXD3Q9UJU5 478 aaPredicted RBP8.76□□□□□ -1.01
LINC00161-202ENST00000455939 NAGPAQ9UK23 515 aa8.76□□□□□ -1.01
LINC00161-202ENST00000455939 LOC102724428A0A0B4J2F2 783 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 TNFRSF21O75509 655 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 ALBP02768 609 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 SIK1P57059 783 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 NCAPG2Q86XI2 1143 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 C1orf127Q8N9H9 656 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 SNX29Q8TEQ0 813 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 SPACA7Q96KW9 195 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 CITED4Q96RK1 184 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 STARD13Q9Y3M8 1113 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 CNTNAP5Q8WYK1 1306 aa8.75□□□□□ -1.01
LINC00161-202ENST00000455939 RGS9O75916 674 aaPredicted RBP8.74□□□□□ -1.01
LINC00161-202ENST00000455939 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
LINC00161-202ENST00000455939 PERM1Q5SV97 790 aa8.74□□□□□ -1.01
LINC00161-202ENST00000455939 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
LINC00161-202ENST00000455939 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.01
LINC00161-202ENST00000455939 SCARF2Q96GP6 870 aaPredicted RBP8.74□□□□□ -1.01
LINC00161-202ENST00000455939 MKL2Q9ULH7 1088 aa8.74□□□□□ -1.01
LINC00161-202ENST00000455939 ZBTB7CA1YPR0 619 aa8.73□□□□□ -1.01
LINC00161-202ENST00000455939 DGKGP49619 791 aa8.73□□□□□ -1.01
LINC00161-202ENST00000455939 COL13A1Q5TAT6 717 aaPredicted RBP8.73□□□□□ -1.01
LINC00161-202ENST00000455939 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
LINC00161-202ENST00000455939 PMEPA1Q969W9 287 aa8.73□□□□□ -1.01
LINC00161-202ENST00000455939 RBCK1Q9BYM8 510 aa8.73□□□□□ -1.01
LINC00161-202ENST00000455939 SMG9Q9H0W8 520 aaKnown RBP8.73□□□□□ -1.01
LINC00161-202ENST00000455939 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
LINC00161-202ENST00000455939 LILRB5O75023 590 aa8.72□□□□□ -1.01
LINC00161-202ENST00000455939 PLD4Q96BZ4 506 aa8.72□□□□□ -1.01
LINC00161-202ENST00000455939 FAM129BQ96TA1 746 aa8.72□□□□□ -1.01
LINC00161-202ENST00000455939 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
LINC00161-202ENST00000455939 EREGO14944 169 aa8.71□□□□□ -1.02
LINC00161-202ENST00000455939 GPR182O15218 404 aa8.71□□□□□ -1.02
LINC00161-202ENST00000455939 NEFLP07196 543 aa8.71□□□□□ -1.02
LINC00161-202ENST00000455939 HOXD8P13378 290 aaPredicted RBP8.71□□□□□ -1.02
LINC00161-202ENST00000455939 TMC7Q7Z402 723 aa8.71□□□□□ -1.02
LINC00161-202ENST00000455939 DMRTB1Q96MA1 342 aa8.71□□□□□ -1.02
LINC00161-202ENST00000455939 LPIN3Q9BQK8 851 aa8.71□□□□□ -1.02
LINC00161-202ENST00000455939 CHRDQ9H2X0 955 aa8.71□□□□□ -1.02
LINC00161-202ENST00000455939 RNF225M0QZC1 329 aaPredicted RBP8.7□□□□□ -1.02
LINC00161-202ENST00000455939 PIK3R2O00459 728 aa8.7□□□□□ -1.02
LINC00161-202ENST00000455939 GNB5O14775 395 aa8.7□□□□□ -1.02
LINC00161-202ENST00000455939 HOXB4P17483 251 aaPredicted RBP8.7□□□□□ -1.02
LINC00161-202ENST00000455939 ORC1Q13415 861 aa8.7□□□□□ -1.02
LINC00161-202ENST00000455939 SUZ12Q15022 739 aaKnown RBP8.7□□□□□ -1.02
LINC00161-202ENST00000455939 C20orf204Q6ZNR8 217 aa8.7□□□□□ -1.02
LINC00161-202ENST00000455939 ZSCAN29Q8IWY8 852 aaPredicted RBP8.7□□□□□ -1.02
LINC00161-202ENST00000455939 FRRS1LQ9P0K9 344 aa8.7□□□□□ -1.02
LINC00161-202ENST00000455939 AMOTL2Q9Y2J4 779 aa8.7□□□□□ -1.02
LINC00161-202ENST00000455939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.7□□□□□ -1.02
LINC00161-202ENST00000455939 KIF4AO95239 1232 aa8.69□□□□□ -1.02
LINC00161-202ENST00000455939 IRS1P35568 1242 aa8.69□□□□□ -1.02
LINC00161-202ENST00000455939 ATP11AP98196 1134 aa8.69□□□□□ -1.02
LINC00161-202ENST00000455939 ZFYVE28Q9HCC9 887 aa8.69□□□□□ -1.02
LINC00161-202ENST00000455939 SHROOM4Q9ULL8 1493 aa8.69□□□□□ -1.02
LINC00161-202ENST00000455939 POLR3DP05423 398 aaPredicted RBP8.68□□□□□ -1.02
LINC00161-202ENST00000455939 CEP135Q66GS9 1140 aa8.68□□□□□ -1.02
LINC00161-202ENST00000455939 GDF6Q6KF10 455 aaPredicted RBP8.68□□□□□ -1.02
LINC00161-202ENST00000455939 LINC00114Q6XXX2 140 aa8.68□□□□□ -1.02
LINC00161-202ENST00000455939 EIF4G1Q04637 1599 aaKnown RBP8.68□□□□□ -1.02
LINC00161-202ENST00000455939 CPNE3O75131 537 aaKnown RBP8.67□□□□□ -1.02
LINC00161-202ENST00000455939 SMNDC1O75940 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00161-202ENST00000455939 EDN3P14138 238 aa8.67□□□□□ -1.02
LINC00161-202ENST00000455939 AFF1P51825 1210 aaKnown RBP8.67□□□□□ -1.02
LINC00161-202ENST00000455939 USPL1Q5W0Q7 1092 aa8.67□□□□□ -1.02
LINC00161-202ENST00000455939 RASSF4Q9H2L5 321 aa8.67□□□□□ -1.02
LINC00161-202ENST00000455939 SALL4Q9UJQ4 1053 aa8.67□□□□□ -1.02
LINC00161-202ENST00000455939 ACPPP15309 386 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 RASSF7Q02833 373 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 CEP120Q8N960 986 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 TRIM11Q96F44 468 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 ASB16Q96NS5 453 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 PLVAPQ9BX97 442 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 NOP53Q9NZM5 478 aaKnown RBP8.66□□□□□ -1.02
LINC00161-202ENST00000455939 TRIM33Q9UPN9 1127 aa8.66□□□□□ -1.02
LINC00161-202ENST00000455939 EIF1AYO14602 144 aaKnown RBP8.65□□□□□ -1.02
LINC00161-202ENST00000455939 TRPA1O75762 1119 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 IGHA2P01877 340 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 NID1P14543 1247 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 PLCB3Q01970 1234 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 ALKBH8Q96BT7 664 aaKnown RBP8.65□□□□□ -1.02
LINC00161-202ENST00000455939 PBX4Q9BYU1 374 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 LATS2Q9NRM7 1088 aa8.65□□□□□ -1.02
LINC00161-202ENST00000455939 SPDYE3A6NKU9 549 aa8.64□□□□□ -1.03
LINC00161-202ENST00000455939 FAM177BA6PVY3 158 aa8.64□□□□□ -1.03
LINC00161-202ENST00000455939 GDF11O95390 407 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms